RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 VBP1P61758 197 aa0.82□□□□□ -2.28
HMGCS1-207ENST00000514610 TRIQKQ629K1 86 aa0.82□□□□□ -2.28
HMGCS1-207ENST00000514610 SBSPONQ8IVN8 264 aa0.82□□□□□ -2.28
HMGCS1-207ENST00000514610 FAM24BQ8N5W8 94 aa0.82□□□□□ -2.28
HMGCS1-207ENST00000514610 DYDC1Q8WWB3 177 aa0.82□□□□□ -2.28
HMGCS1-207ENST00000514610 PSMF1Q92530 271 aa0.82□□□□□ -2.28
HMGCS1-207ENST00000514610 BORCS8Q96FH0 119 aa0.82□□□□□ -2.28
HMGCS1-207ENST00000514610 OR2H1Q9GZK4 316 aa0.82□□□□□ -2.28
HMGCS1-207ENST00000514610 BIN3Q9NQY0 253 aa0.82□□□□□ -2.28
HMGCS1-207ENST00000514610 MED11Q9P086 117 aa0.82□□□□□ -2.28
HMGCS1-207ENST00000514610 TENM3Q9P273 2699 aa0.82□□□□□ -2.28
HMGCS1-207ENST00000514610 ERBINQ96RT1 1412 aa0.81□□□□□ -2.28
HMGCS1-207ENST00000514610 YTHDC2Q9H6S0 1430 aaKnown RBP0.81□□□□□ -2.28
HMGCS1-207ENST00000514610 KIAA1549LQ6ZVL6 1849 aa0.81□□□□□ -2.28
HMGCS1-207ENST00000514610 TRAV23DV6A0A075B6W5 121 aa0.81□□□□□ -2.28
HMGCS1-207ENST00000514610 GPR31O00270 319 aa0.81□□□□□ -2.28
HMGCS1-207ENST00000514610 CST7O76096 145 aa0.81□□□□□ -2.28
HMGCS1-207ENST00000514610 MT-ND6P03923 174 aa0.81□□□□□ -2.28
HMGCS1-207ENST00000514610 FAM216BQ8N7L0 139 aa0.81□□□□□ -2.28
HMGCS1-207ENST00000514610 NUP35Q8NFH5 326 aa0.81□□□□□ -2.28
HMGCS1-207ENST00000514610 CARD19Q96LW7 228 aa0.81□□□□□ -2.28
HMGCS1-207ENST00000514610 FER1L6Q2WGJ9 1857 aa0.81□□□□□ -2.28
HMGCS1-207ENST00000514610 USP54Q70EL1 1684 aa0.81□□□□□ -2.28
HMGCS1-207ENST00000514610 TRPM7Q96QT4 1865 aa0.8□□□□□ -2.28
HMGCS1-207ENST00000514610 LYRM1O43325 122 aa0.8□□□□□ -2.28
HMGCS1-207ENST00000514610 CIRBPQ14011 172 aaKnown RBP0.8□□□□□ -2.28
HMGCS1-207ENST00000514610 ANGPTL5Q86XS5 388 aa0.8□□□□□ -2.28
HMGCS1-207ENST00000514610 OTORQ9NRC9 128 aa0.8□□□□□ -2.28
HMGCS1-207ENST00000514610 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.8□□□□□ -2.28
HMGCS1-207ENST00000514610 ROCK1Q13464 1354 aa0.8□□□□□ -2.28
HMGCS1-207ENST00000514610 MYH1P12882 1939 aa0.79□□□□□ -2.28
HMGCS1-207ENST00000514610 ZCCHC11Q5TAX3 1644 aaKnown RBP0.79□□□□□ -2.28
HMGCS1-207ENST00000514610 VMA21Q3ZAQ7 101 aa0.79□□□□□ -2.28
HMGCS1-207ENST00000514610 OR10AG1Q8NH19 301 aa0.79□□□□□ -2.28
HMGCS1-207ENST00000514610 RTL9Q8NET4 1388 aa0.79□□□□□ -2.28
HMGCS1-207ENST00000514610 NINQ8N4C6 2090 aa0.79□□□□□ -2.28
HMGCS1-207ENST00000514610 A0A096LPI6 279 aa0.78□□□□□ -2.28
HMGCS1-207ENST00000514610 TRDV1A0A1B0GX56 115 aa0.78□□□□□ -2.28
HMGCS1-207ENST00000514610 A0A1W2PPM0 123 aa0.78□□□□□ -2.28
HMGCS1-207ENST00000514610 PPP5D1E7EU14 171 aa0.78□□□□□ -2.28
HMGCS1-207ENST00000514610 LINC00575Q6W349 94 aa0.78□□□□□ -2.28
HMGCS1-207ENST00000514610 PHF5AQ7RTV0 110 aaKnown RBP0.78□□□□□ -2.28
HMGCS1-207ENST00000514610 PRR15Q8IV56 129 aa0.78□□□□□ -2.28
HMGCS1-207ENST00000514610 LIMD2Q9BT23 127 aa0.78□□□□□ -2.28
HMGCS1-207ENST00000514610 BOLA2Q9H3K6 86 aa0.78□□□□□ -2.28
HMGCS1-207ENST00000514610 TAF9BQ9HBM6 251 aa0.78□□□□□ -2.28
HMGCS1-207ENST00000514610 KNTC1P50748 2209 aa0.78□□□□□ -2.28
HMGCS1-207ENST00000514610 BCORL1Q5H9F3 1711 aa0.78□□□□□ -2.29
HMGCS1-207ENST00000514610 ASH1LQ9NR48 2969 aaKnown RBP0.78□□□□□ -2.29
HMGCS1-207ENST00000514610 H3BQV1 296 aa0.77□□□□□ -2.29
HMGCS1-207ENST00000514610 GABARAPH6UMI1 98 aa0.77□□□□□ -2.29
HMGCS1-207ENST00000514610 IGLV3-1P01715 115 aa0.77□□□□□ -2.29
HMGCS1-207ENST00000514610 CD14P08571 375 aa0.77□□□□□ -2.29
HMGCS1-207ENST00000514610 FABP2P12104 132 aa0.77□□□□□ -2.29
HMGCS1-207ENST00000514610 SPATA45Q537H7 98 aa0.77□□□□□ -2.29
HMGCS1-207ENST00000514610 DCUN1D2Q6PH85 259 aa0.77□□□□□ -2.29
HMGCS1-207ENST00000514610 FOXI2Q6ZQN5 318 aa0.77□□□□□ -2.29
HMGCS1-207ENST00000514610 STX12Q86Y82 276 aa0.77□□□□□ -2.29
HMGCS1-207ENST00000514610 PCBD2Q9H0N5 130 aa0.77□□□□□ -2.29
HMGCS1-207ENST00000514610 TRAPPC8Q9Y2L5 1435 aa0.77□□□□□ -2.29
HMGCS1-207ENST00000514610 ATG2AQ2TAZ0 1938 aa0.76□□□□□ -2.29
HMGCS1-207ENST00000514610 KIAA1107Q9UPP5 1409 aa0.76□□□□□ -2.29
HMGCS1-207ENST00000514610 MAP1LC3B2A6NCE7 125 aa0.76□□□□□ -2.29
HMGCS1-207ENST00000514610 H7BYZ3 331 aa0.76□□□□□ -2.29
HMGCS1-207ENST00000514610 KPNA4O00629 521 aaPredicted RBP0.76□□□□□ -2.29
HMGCS1-207ENST00000514610 FABP4P15090 132 aa0.76□□□□□ -2.29
HMGCS1-207ENST00000514610 MIR22HGQ0VDD5 57 aa0.76□□□□□ -2.29
HMGCS1-207ENST00000514610 DIAPH2-AS1Q14236 149 aa0.76□□□□□ -2.29
HMGCS1-207ENST00000514610 GLIPR1L1Q6UWM5 242 aa0.76□□□□□ -2.29
HMGCS1-207ENST00000514610 ZCCHC23Q6ZST2 131 aa0.76□□□□□ -2.29
HMGCS1-207ENST00000514610 OR4C12Q96R67 309 aa0.76□□□□□ -2.29
HMGCS1-207ENST00000514610 TCEAL2Q9H3H9 227 aaPredicted RBP0.76□□□□□ -2.29
HMGCS1-207ENST00000514610 NAT8BQ9UHF3 227 aa0.76□□□□□ -2.29
HMGCS1-207ENST00000514610 TPRKBQ9Y3C4 175 aa0.76□□□□□ -2.29
HMGCS1-207ENST00000514610 NUPR2A6NF83 97 aa0.75□□□□□ -2.29
HMGCS1-207ENST00000514610 NEFHP12036 1026 aa0.75□□□□□ -2.29
HMGCS1-207ENST00000514610 CST11Q9H112 138 aa0.75□□□□□ -2.29
HMGCS1-207ENST00000514610 LRTM1Q9HBL6 345 aa0.75□□□□□ -2.29
HMGCS1-207ENST00000514610 LAMTOR3Q9UHA4 124 aa0.75□□□□□ -2.29
HMGCS1-207ENST00000514610 NUBP2Q9Y5Y2 271 aa0.75□□□□□ -2.29
HMGCS1-207ENST00000514610 TCOF1Q13428 1488 aaKnown RBP0.74□□□□□ -2.29
HMGCS1-207ENST00000514610 TMEM78Q5T7P6 136 aa0.74□□□□□ -2.29
HMGCS1-207ENST00000514610 HSPB8Q9UJY1 196 aa0.74□□□□□ -2.29
HMGCS1-207ENST00000514610 DLC1Q96QB1 1528 aa0.74□□□□□ -2.29
HMGCS1-207ENST00000514610 XIRP1Q702N8 1843 aaKnown RBP0.73□□□□□ -2.29
HMGCS1-207ENST00000514610 CTTNBP2Q8WZ74 1663 aa0.73□□□□□ -2.29
HMGCS1-207ENST00000514610 C5orf58C9J3I9 102 aa0.73□□□□□ -2.29
HMGCS1-207ENST00000514610 FABP1P07148 127 aa0.73□□□□□ -2.29
HMGCS1-207ENST00000514610 S100A11P31949 105 aa0.73□□□□□ -2.29
HMGCS1-207ENST00000514610 S100A5P33763 92 aa0.73□□□□□ -2.29
HMGCS1-207ENST00000514610 LINC00269Q8N2A0 174 aa0.73□□□□□ -2.29
HMGCS1-207ENST00000514610 OR4B1Q8NGF8 309 aa0.73□□□□□ -2.29
HMGCS1-207ENST00000514610 OR5H6Q8NGV6 325 aa0.73□□□□□ -2.29
HMGCS1-207ENST00000514610 OR10AC1Q8NH08 325 aa0.73□□□□□ -2.29
HMGCS1-207ENST00000514610 EFCAB11Q9BUY7 163 aa0.73□□□□□ -2.29
HMGCS1-207ENST00000514610 NIT2Q9NQR4 276 aa0.73□□□□□ -2.29
HMGCS1-207ENST00000514610 IL20Q9NYY1 176 aa0.73□□□□□ -2.29
HMGCS1-207ENST00000514610 BCL9O00512 1426 aa0.72□□□□□ -2.29
HMGCS1-207ENST00000514610 SDC2P34741 201 aa0.72□□□□□ -2.29
HMGCS1-207ENST00000514610 NEDD8Q15843 81 aa0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 160.5 ms