RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 GNB1LQ9BYB4 327 aa11.46□□□□□ -0.57
VCAN-211ENST00000513984 NPFFR1Q9GZQ6 430 aa11.46□□□□□ -0.57
VCAN-211ENST00000513984 ZNF702PQ9H963 129 aa11.46□□□□□ -0.57
VCAN-211ENST00000513984 PDZD2O15018 2839 aa11.46□□□□□ -0.57
VCAN-211ENST00000513984 MXRA5Q9NR99 2828 aa11.46□□□□□ -0.58
VCAN-211ENST00000513984 FRMD6-AS1P0C7T7 363 aa11.46□□□□□ -0.58
VCAN-211ENST00000513984 WDR73Q6P4I2 378 aa11.46□□□□□ -0.58
VCAN-211ENST00000513984 HIST3H2BBQ8N257 126 aa11.46□□□□□ -0.58
VCAN-211ENST00000513984 OR4B1Q8NGF8 309 aa11.46□□□□□ -0.58
VCAN-211ENST00000513984 GLMPQ8WWB7 406 aa11.46□□□□□ -0.58
VCAN-211ENST00000513984 DAZAP1Q96EP5 407 aaKnown RBP11.46□□□□□ -0.58
VCAN-211ENST00000513984 ZC2HC1AQ96GY0 325 aa11.46□□□□□ -0.58
VCAN-211ENST00000513984 NAT8BQ9UHF3 227 aa11.46□□□□□ -0.58
VCAN-211ENST00000513984 IGHV3OR16-13A0A075B7E8 117 aa11.45□□□□□ -0.58
VCAN-211ENST00000513984 IGHV3-49A0A0A0MS15 119 aa11.45□□□□□ -0.58
VCAN-211ENST00000513984 IGHV3-74A0A0B4J1X5 117 aa11.45□□□□□ -0.58
VCAN-211ENST00000513984 IFITM10A6NMD0 228 aa11.45□□□□□ -0.58
VCAN-211ENST00000513984 MT-ND6P03923 174 aa11.45□□□□□ -0.58
VCAN-211ENST00000513984 HLA-DMBP28068 263 aa11.45□□□□□ -0.58
VCAN-211ENST00000513984 RASL11AQ6T310 242 aa11.45□□□□□ -0.58
VCAN-211ENST00000513984 NUP35Q8NFH5 326 aa11.45□□□□□ -0.58
VCAN-211ENST00000513984 NEU1Q99519 415 aa11.45□□□□□ -0.58
VCAN-211ENST00000513984 FOXC2Q99958 501 aa11.45□□□□□ -0.58
VCAN-211ENST00000513984 MRPL18Q9H0U6 180 aaKnown RBP11.45□□□□□ -0.58
VCAN-211ENST00000513984 IGKV2-40A0A087WW87 121 aaPredicted RBP11.44□□□□□ -0.58
VCAN-211ENST00000513984 A8MWL6 223 aa11.44□□□□□ -0.58
VCAN-211ENST00000513984 SNURFLB1AK76 121 aa11.44□□□□□ -0.58
VCAN-211ENST00000513984 IGKV2D-40P01614 121 aaPredicted RBP11.44□□□□□ -0.58
VCAN-211ENST00000513984 SLC35B1P78383 322 aa11.44□□□□□ -0.58
VCAN-211ENST00000513984 GFI1BQ5VTD9 330 aa11.44□□□□□ -0.58
VCAN-211ENST00000513984 IGFL4Q6B9Z1 124 aa11.44□□□□□ -0.58
VCAN-211ENST00000513984 COX8CQ7Z4L0 72 aa11.44□□□□□ -0.58
VCAN-211ENST00000513984 WIPF2Q8TF74 440 aaPredicted RBP11.44□□□□□ -0.58
VCAN-211ENST00000513984 GFRA4Q9GZZ7 299 aa11.44□□□□□ -0.58
VCAN-211ENST00000513984 XKRY2A2RUG3 117 aa11.44□□□□□ -0.58
VCAN-211ENST00000513984 HIGD1CA8MV81 97 aa11.44□□□□□ -0.58
VCAN-211ENST00000513984 SPINK4O60575 86 aa11.44□□□□□ -0.58
VCAN-211ENST00000513984 LCN12Q6JVE5 192 aa11.44□□□□□ -0.58
VCAN-211ENST00000513984 MRPL54Q6P161 138 aaKnown RBP11.44□□□□□ -0.58
VCAN-211ENST00000513984 TMEM136Q6ZRR5 245 aa11.44□□□□□ -0.58
VCAN-211ENST00000513984 MRPL53Q96EL3 112 aaKnown RBP11.44□□□□□ -0.58
VCAN-211ENST00000513984 PEF1Q9UBV8 284 aaKnown RBP11.44□□□□□ -0.58
VCAN-211ENST00000513984 CCDC168Q8NDH2 2452 aa11.43□□□□□ -0.58
VCAN-211ENST00000513984 FAM231BA6NCW3 169 aa11.43□□□□□ -0.58
VCAN-211ENST00000513984 SMAD7O15105 426 aaKnown RBP11.43□□□□□ -0.58
VCAN-211ENST00000513984 PRB4P10163 310 aaPredicted RBP11.43□□□□□ -0.58
VCAN-211ENST00000513984 C10orf99Q6UWK7 81 aa11.43□□□□□ -0.58
VCAN-211ENST00000513984 Q8N2B8 174 aa11.43□□□□□ -0.58
VCAN-211ENST00000513984 SIGLECL1Q8N7X8 197 aa11.43□□□□□ -0.58
VCAN-211ENST00000513984 FLNAP21333 2647 aaKnown RBP11.43□□□□□ -0.58
VCAN-211ENST00000513984 TRAV8-2A0A0B4J237 113 aa11.42□□□□□ -0.58
VCAN-211ENST00000513984 RBAKDNA6NC62 111 aa11.42□□□□□ -0.58
VCAN-211ENST00000513984 ZNF705FA8MVS1 300 aaPredicted RBP11.42□□□□□ -0.58
VCAN-211ENST00000513984 HLA-DQA1P01909 254 aa11.42□□□□□ -0.58
VCAN-211ENST00000513984 FOXE3Q13461 319 aa11.42□□□□□ -0.58
VCAN-211ENST00000513984 SAPCD1Q5SSQ6 148 aa11.42□□□□□ -0.58
VCAN-211ENST00000513984 C8orf86Q6ZUL3 223 aa11.42□□□□□ -0.58
VCAN-211ENST00000513984 ATP5L2Q7Z4Y8 100 aa11.42□□□□□ -0.58
VCAN-211ENST00000513984 TMEM86BQ8N661 226 aa11.42□□□□□ -0.58
VCAN-211ENST00000513984 MYOZ3Q8TDC0 251 aa11.42□□□□□ -0.58
VCAN-211ENST00000513984 C8orf49Q96NF6 230 aa11.42□□□□□ -0.58
VCAN-211ENST00000513984 ASCL2Q99929 193 aa11.42□□□□□ -0.58
VCAN-211ENST00000513984 GPR61Q9BZJ8 451 aa11.42□□□□□ -0.58
VCAN-211ENST00000513984 TLN2Q9Y4G6 2542 aa11.42□□□□□ -0.58
VCAN-211ENST00000513984 A0A1W2PS18 150 aa11.42□□□□□ -0.58
VCAN-211ENST00000513984 ELANEP08246 267 aa11.42□□□□□ -0.58
VCAN-211ENST00000513984 CRIP1P50238 77 aa11.42□□□□□ -0.58
VCAN-211ENST00000513984 GTSF1Q8WW33 167 aa11.42□□□□□ -0.58
VCAN-211ENST00000513984 PRR25Q96S07 402 aa11.42□□□□□ -0.58
VCAN-211ENST00000513984 VGLL1Q99990 258 aa11.42□□□□□ -0.58
VCAN-211ENST00000513984 CLEC5AQ9NY25 188 aa11.42□□□□□ -0.58
VCAN-211ENST00000513984 SMIM6P0DI80 62 aa11.41□□□□□ -0.58
VCAN-211ENST00000513984 CT45A10P0DMU9 189 aa11.41□□□□□ -0.58
VCAN-211ENST00000513984 KRTAP1-1Q07627 177 aa11.41□□□□□ -0.58
VCAN-211ENST00000513984 IL17RELQ6ZVW7 336 aa11.41□□□□□ -0.58
VCAN-211ENST00000513984 TCF24Q7RTU0 167 aa11.41□□□□□ -0.58
VCAN-211ENST00000513984 RNF182Q8N6D2 247 aa11.41□□□□□ -0.58
VCAN-211ENST00000513984 RNF152Q8N8N0 203 aa11.41□□□□□ -0.58
VCAN-211ENST00000513984 OR2D3Q8NGH3 330 aa11.41□□□□□ -0.58
VCAN-211ENST00000513984 DAZ1Q9NQZ3 744 aaKnown RBP11.41□□□□□ -0.58
VCAN-211ENST00000513984 A0A1B0GXF2 115 aa11.4□□□□□ -0.58
VCAN-211ENST00000513984 K7EMT4 169 aa11.4□□□□□ -0.58
VCAN-211ENST00000513984 RPLP1P05386 114 aaKnown RBP11.4□□□□□ -0.58
VCAN-211ENST00000513984 PDZD11Q5EBL8 140 aa11.4□□□□□ -0.58
VCAN-211ENST00000513984 GPHB5Q86YW7 130 aa11.4□□□□□ -0.58
VCAN-211ENST00000513984 IGHV7-4-1A0A0J9YVY3 117 aa11.39□□□□□ -0.59
VCAN-211ENST00000513984 PRAC2D3DTV9 90 aa11.39□□□□□ -0.59
VCAN-211ENST00000513984 S100A2P29034 98 aa11.39□□□□□ -0.59
VCAN-211ENST00000513984 FOXA3P55318 350 aaPredicted RBP11.39□□□□□ -0.59
VCAN-211ENST00000513984 FAM106AQ4KMX7 169 aa11.39□□□□□ -0.59
VCAN-211ENST00000513984 RBPMS2Q6ZRY4 209 aaKnown RBP11.39□□□□□ -0.59
VCAN-211ENST00000513984 C12orf57Q99622 126 aa11.39□□□□□ -0.59
VCAN-211ENST00000513984 ITPR2Q14571 2701 aa11.39□□□□□ -0.59
VCAN-211ENST00000513984 CD5LO43866 347 aa11.39□□□□□ -0.59
VCAN-211ENST00000513984 RAB4BP61018 213 aa11.39□□□□□ -0.59
VCAN-211ENST00000513984 Q8TAT8 98 aa11.39□□□□□ -0.59
VCAN-211ENST00000513984 UNC79Q9P2D8 2635 aa11.38□□□□□ -0.59
VCAN-211ENST00000513984 LGALS1P09382 135 aaKnown RBP11.38□□□□□ -0.59
VCAN-211ENST00000513984 TM4SF20Q53R12 229 aa11.38□□□□□ -0.59
VCAN-211ENST00000513984 FAM162BQ5T6X4 162 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms