RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 NPIPB6E9PJ23 425 aa6.94□□□□□ -1.3
RNF4-221ENST00000513643 C17orf112F2Z3M2 114 aa6.94□□□□□ -1.3
RNF4-221ENST00000513643 BOLA2-SMG1P6H3BVE0 249 aa6.94□□□□□ -1.3
RNF4-221ENST00000513643 M0R2Z0 102 aa6.94□□□□□ -1.3
RNF4-221ENST00000513643 PYYP10082 97 aa6.94□□□□□ -1.3
RNF4-221ENST00000513643 TSPOP30536 169 aa6.94□□□□□ -1.3
RNF4-221ENST00000513643 HIST1H1AQ02539 215 aaPredicted RBP6.94□□□□□ -1.3
RNF4-221ENST00000513643 PMS2P11Q13670 270 aa6.94□□□□□ -1.3
RNF4-221ENST00000513643 SPINK13Q1W4C9 94 aa6.94□□□□□ -1.3
RNF4-221ENST00000513643 LRRC20Q8TCA0 184 aa6.94□□□□□ -1.3
RNF4-221ENST00000513643 ODF3Q96PU9 254 aa6.94□□□□□ -1.3
RNF4-221ENST00000513643 GOLT1BQ9Y3E0 138 aa6.94□□□□□ -1.3
RNF4-221ENST00000513643 TIMM9Q9Y5J7 89 aa6.94□□□□□ -1.3
RNF4-221ENST00000513643 RFNGQ9Y644 331 aa6.94□□□□□ -1.3
RNF4-221ENST00000513643 FRAS1Q86XX4 4008 aa6.93□□□□□ -1.3
RNF4-221ENST00000513643 RNF222A6NCQ9 220 aa6.93□□□□□ -1.3
RNF4-221ENST00000513643 M0R3E3 92 aa6.93□□□□□ -1.3
RNF4-221ENST00000513643 NBEAP1P0C6P0 100 aa6.93□□□□□ -1.3
RNF4-221ENST00000513643 CT45A10P0DMU9 189 aa6.93□□□□□ -1.3
RNF4-221ENST00000513643 TCTAP57738 103 aa6.93□□□□□ -1.3
RNF4-221ENST00000513643 Q6ZTC4 211 aa6.93□□□□□ -1.3
RNF4-221ENST00000513643 OR2G3Q8NGZ4 309 aa6.93□□□□□ -1.3
RNF4-221ENST00000513643 LINC00476Q8WZB0 136 aa6.93□□□□□ -1.3
RNF4-221ENST00000513643 SMIM3Q9BZL3 60 aa6.93□□□□□ -1.3
RNF4-221ENST00000513643 OR51M1Q9H341 326 aa6.93□□□□□ -1.3
RNF4-221ENST00000513643 DKK2Q9UBU2 259 aa6.93□□□□□ -1.3
RNF4-221ENST00000513643 PRELID1Q9Y255 219 aa6.93□□□□□ -1.3
RNF4-221ENST00000513643 KLK5Q9Y337 293 aaPredicted RBP6.93□□□□□ -1.3
RNF4-221ENST00000513643 DNAH17Q9UFH2 4485 aa6.93□□□□□ -1.3
RNF4-221ENST00000513643 BIRC6Q9NR09 4857 aa6.93□□□□□ -1.3
RNF4-221ENST00000513643 TRAV12-2A0A075B6T6 113 aa6.92□□□□□ -1.3
RNF4-221ENST00000513643 JTBO76095 146 aa6.92□□□□□ -1.3
RNF4-221ENST00000513643 INSP01308 110 aa6.92□□□□□ -1.3
RNF4-221ENST00000513643 IFNA5P01569 189 aa6.92□□□□□ -1.3
RNF4-221ENST00000513643 PRM2P04554 102 aa6.92□□□□□ -1.3
RNF4-221ENST00000513643 PRB4P10163 310 aaPredicted RBP6.92□□□□□ -1.3
RNF4-221ENST00000513643 CDKN1BP46527 198 aa6.92□□□□□ -1.3
RNF4-221ENST00000513643 KIR3DS1Q14943 382 aa6.92□□□□□ -1.3
RNF4-221ENST00000513643 FFAR4Q5NUL3 377 aa6.92□□□□□ -1.3
RNF4-221ENST00000513643 BAP18Q8IXM2 172 aa6.92□□□□□ -1.3
RNF4-221ENST00000513643 TMEM256Q8N2U0 113 aa6.92□□□□□ -1.3
RNF4-221ENST00000513643 RPP25LQ8N5L8 163 aaKnown RBP6.92□□□□□ -1.3
RNF4-221ENST00000513643 SCGB1C1Q8TD33 95 aa6.92□□□□□ -1.3
RNF4-221ENST00000513643 RNF141Q8WVD5 230 aa6.92□□□□□ -1.3
RNF4-221ENST00000513643 C20orf144Q9BQM9 153 aa6.92□□□□□ -1.3
RNF4-221ENST00000513643 APLNQ9ULZ1 77 aa6.92□□□□□ -1.3
RNF4-221ENST00000513643 TNFSF18Q9UNG2 199 aa6.92□□□□□ -1.3
RNF4-221ENST00000513643 FAT2Q9NYQ8 4349 aa6.91□□□□□ -1.3
RNF4-221ENST00000513643 TRAV10A0A0B4J240 114 aa6.91□□□□□ -1.3
RNF4-221ENST00000513643 LOC102723971A0A1B0GUV8 181 aa6.91□□□□□ -1.3
RNF4-221ENST00000513643 KLLNB2CW77 178 aa6.91□□□□□ -1.3
RNF4-221ENST00000513643 HBE1P02100 147 aa6.91□□□□□ -1.3
RNF4-221ENST00000513643 NMBP08949 121 aa6.91□□□□□ -1.3
RNF4-221ENST00000513643 SPART-AS1P0CW21 52 aa6.91□□□□□ -1.3
RNF4-221ENST00000513643 CRISP2P16562 243 aa6.91□□□□□ -1.3
RNF4-221ENST00000513643 AZU1P20160 251 aa6.91□□□□□ -1.3
RNF4-221ENST00000513643 M6PRP20645 277 aa6.91□□□□□ -1.3
RNF4-221ENST00000513643 TAS2R60P59551 318 aa6.91□□□□□ -1.3
RNF4-221ENST00000513643 RRN3P1Q2M238 152 aa6.91□□□□□ -1.3
RNF4-221ENST00000513643 C9orf47Q6ZRZ4 202 aa6.91□□□□□ -1.3
RNF4-221ENST00000513643 LYPD1Q8N2G4 141 aa6.91□□□□□ -1.3
RNF4-221ENST00000513643 EXOC3-AS1Q8N2X6 119 aa6.91□□□□□ -1.3
RNF4-221ENST00000513643 OR10J6PQ8NGY7 276 aa6.91□□□□□ -1.3
RNF4-221ENST00000513643 SUN5Q8TC36 379 aa6.91□□□□□ -1.3
RNF4-221ENST00000513643 C2CD4CQ8TF44 421 aa6.91□□□□□ -1.3
RNF4-221ENST00000513643 LINC00477Q96M19 166 aa6.91□□□□□ -1.3
RNF4-221ENST00000513643 PSMG3Q9BT73 122 aaPredicted RBP6.91□□□□□ -1.3
RNF4-221ENST00000513643 PAXXQ9BUH6 204 aa6.91□□□□□ -1.3
RNF4-221ENST00000513643 AGPAT4-IT1Q9H0P7 198 aa6.91□□□□□ -1.3
RNF4-221ENST00000513643 IGHV3OR16-12A0A075B7B8 117 aa6.9□□□□□ -1.3
RNF4-221ENST00000513643 TEX48A0A1B0GUV7 120 aa6.9□□□□□ -1.3
RNF4-221ENST00000513643 ZNF705GA8MUZ8 300 aaPredicted RBP6.9□□□□□ -1.3
RNF4-221ENST00000513643 ZNF324O75467 553 aaPredicted RBP6.9□□□□□ -1.3
RNF4-221ENST00000513643 OR10J4P0C629 311 aa6.9□□□□□ -1.3
RNF4-221ENST00000513643 RHOBP62745 196 aa6.9□□□□□ -1.3
RNF4-221ENST00000513643 ZNF266Q14584 549 aa6.9□□□□□ -1.3
RNF4-221ENST00000513643 FAM222AQ5U5X8 452 aa6.9□□□□□ -1.3
RNF4-221ENST00000513643 GFI1BQ5VTD9 330 aa6.9□□□□□ -1.3
RNF4-221ENST00000513643 LGALS9CQ6DKI2 356 aa6.9□□□□□ -1.3
RNF4-221ENST00000513643 ARL6IP6Q8N6S5 226 aa6.9□□□□□ -1.3
RNF4-221ENST00000513643 OR2T35Q8NGX2 323 aa6.9□□□□□ -1.3
RNF4-221ENST00000513643 PHYHIPLQ96FC7 376 aa6.9□□□□□ -1.3
RNF4-221ENST00000513643 PPP1R14DQ9NXH3 145 aa6.9□□□□□ -1.3
RNF4-221ENST00000513643 YTHDF2Q9Y5A9 579 aaKnown RBP6.9□□□□□ -1.3
RNF4-221ENST00000513643 TRBV7-9A0A0J9YWB2 115 aa6.89□□□□□ -1.31
RNF4-221ENST00000513643 H7BYZ3 331 aa6.89□□□□□ -1.31
RNF4-221ENST00000513643 ATP6V0CP27449 155 aa6.89□□□□□ -1.31
RNF4-221ENST00000513643 RAB2AP61019 212 aa6.89□□□□□ -1.31
RNF4-221ENST00000513643 SERF2P84101 59 aa6.89□□□□□ -1.31
RNF4-221ENST00000513643 ERCC8Q13216 396 aa6.89□□□□□ -1.31
RNF4-221ENST00000513643 ICAM4Q14773 271 aa6.89□□□□□ -1.31
RNF4-221ENST00000513643 ACOT6Q3I5F7 207 aaPredicted RBP6.89□□□□□ -1.31
RNF4-221ENST00000513643 ZNF767PQ75MW2 155 aa6.89□□□□□ -1.31
RNF4-221ENST00000513643 ZFAND2AQ8N6M9 145 aa6.89□□□□□ -1.31
RNF4-221ENST00000513643 LINC00612Q8N6U2 182 aa6.89□□□□□ -1.31
RNF4-221ENST00000513643 RNASE8Q8TDE3 154 aaKnown RBP6.89□□□□□ -1.31
RNF4-221ENST00000513643 BLNKQ8WV28 456 aa6.89□□□□□ -1.31
RNF4-221ENST00000513643 LINC00467Q9BRT7 94 aa6.89□□□□□ -1.31
RNF4-221ENST00000513643 CYTL1Q9NRR1 136 aa6.89□□□□□ -1.31
RNF4-221ENST00000513643 PLA2G2EQ9NZK7 142 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms