RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 IGHV3-23P01764 117 aa9.1□□□□□ -0.95
TCOF1-211ENST00000513346 PRR20EP86478 221 aa9.1□□□□□ -0.95
TCOF1-211ENST00000513346 PRR20CP86479 221 aa9.1□□□□□ -0.95
TCOF1-211ENST00000513346 PRR20DP86480 221 aa9.1□□□□□ -0.95
TCOF1-211ENST00000513346 PRR20BP86481 221 aa9.1□□□□□ -0.95
TCOF1-211ENST00000513346 PRR20AP86496 221 aa9.1□□□□□ -0.95
TCOF1-211ENST00000513346 ZNF672Q499Z4 452 aaPredicted RBP9.1□□□□□ -0.95
TCOF1-211ENST00000513346 A0A0G2JNJ9 132 aa9.1□□□□□ -0.95
TCOF1-211ENST00000513346 ZNF747Q9BV97 191 aa9.1□□□□□ -0.95
TCOF1-211ENST00000513346 Q9UFV3 132 aa9.1□□□□□ -0.95
TCOF1-211ENST00000513346 PF4P02776 101 aa9.09□□□□□ -0.95
TCOF1-211ENST00000513346 Q6ZSR3 168 aa9.09□□□□□ -0.95
TCOF1-211ENST00000513346 LYPD1Q8N2G4 141 aa9.09□□□□□ -0.95
TCOF1-211ENST00000513346 COL4A3Q01955 1670 aa9.09□□□□□ -0.95
TCOF1-211ENST00000513346 H3BMG7 143 aa9.09□□□□□ -0.95
TCOF1-211ENST00000513346 TMEM95Q3KNT9 176 aa9.09□□□□□ -0.95
TCOF1-211ENST00000513346 FAM104BQ5XKR9 115 aa9.09□□□□□ -0.95
TCOF1-211ENST00000513346 RAX2Q96IS3 184 aa9.09□□□□□ -0.95
TCOF1-211ENST00000513346 NPFFR1Q9GZQ6 430 aa9.09□□□□□ -0.95
TCOF1-211ENST00000513346 SCRT2Q9NQ03 307 aa9.09□□□□□ -0.95
TCOF1-211ENST00000513346 SH2D1AO60880 128 aa9.09□□□□□ -0.95
TCOF1-211ENST00000513346 RHOGP84095 191 aa9.09□□□□□ -0.95
TCOF1-211ENST00000513346 DTX1Q86Y01 620 aa9.09□□□□□ -0.95
TCOF1-211ENST00000513346 YAE1D1Q9NRH1 226 aa9.09□□□□□ -0.95
TCOF1-211ENST00000513346 TRAV40A0A0B4J280 105 aa9.09□□□□□ -0.95
TCOF1-211ENST00000513346 G3V4G9 280 aa9.09□□□□□ -0.95
TCOF1-211ENST00000513346 NBR2O15453 112 aa9.09□□□□□ -0.95
TCOF1-211ENST00000513346 RRN3P1Q2M238 152 aa9.09□□□□□ -0.95
TCOF1-211ENST00000513346 FAM74A4Q5TZK3 123 aa9.09□□□□□ -0.95
TCOF1-211ENST00000513346 NDUFB8O95169 186 aa9.08□□□□□ -0.96
TCOF1-211ENST00000513346 PRB4P10163 310 aaPredicted RBP9.08□□□□□ -0.96
TCOF1-211ENST00000513346 SNRPD3P62318 126 aaKnown RBP9.08□□□□□ -0.96
TCOF1-211ENST00000513346 IGFL3Q6UXB1 125 aa9.08□□□□□ -0.96
TCOF1-211ENST00000513346 PROK2Q9HC23 129 aa9.08□□□□□ -0.96
TCOF1-211ENST00000513346 LAMA3Q16787 3333 aa9.08□□□□□ -0.96
TCOF1-211ENST00000513346 FLNBO75369 2602 aaKnown RBP9.08□□□□□ -0.96
TCOF1-211ENST00000513346 TRAV2A0A0B4J234 112 aa9.08□□□□□ -0.96
TCOF1-211ENST00000513346 IGKV3-15P01624 115 aa9.08□□□□□ -0.96
TCOF1-211ENST00000513346 TMEM155Q4W5P6 130 aa9.08□□□□□ -0.96
TCOF1-211ENST00000513346 DUX5Q96PT3 197 aa9.08□□□□□ -0.96
TCOF1-211ENST00000513346 NUP210Q8TEM1 1887 aaPredicted RBP9.08□□□□□ -0.96
TCOF1-211ENST00000513346 ZNF56Q15929 161 aa9.08□□□□□ -0.96
TCOF1-211ENST00000513346 IGF2-ASQ6U949 168 aa9.08□□□□□ -0.96
TCOF1-211ENST00000513346 FAM159AQ6UWV7 190 aa9.08□□□□□ -0.96
TCOF1-211ENST00000513346 CRXO43186 299 aaPredicted RBP9.08□□□□□ -0.96
TCOF1-211ENST00000513346 LINC01549A6NIU2 74 aa9.07□□□□□ -0.96
TCOF1-211ENST00000513346 ASPHD1Q5U4P2 390 aa9.07□□□□□ -0.96
TCOF1-211ENST00000513346 SLC50A1Q9BRV3 221 aa9.07□□□□□ -0.96
TCOF1-211ENST00000513346 SIGLEC8Q9NYZ4 499 aa9.07□□□□□ -0.96
TCOF1-211ENST00000513346 JMJD1CQ15652 2540 aa9.07□□□□□ -0.96
TCOF1-211ENST00000513346 IGHV3OR16-8A0A075B7F1 116 aa9.07□□□□□ -0.96
TCOF1-211ENST00000513346 IGKV2-40A0A087WW87 121 aaPredicted RBP9.07□□□□□ -0.96
TCOF1-211ENST00000513346 DNAL4O96015 105 aa9.07□□□□□ -0.96
TCOF1-211ENST00000513346 IGKV2D-40P01614 121 aaPredicted RBP9.07□□□□□ -0.96
TCOF1-211ENST00000513346 TAL2Q16559 108 aa9.07□□□□□ -0.96
TCOF1-211ENST00000513346 CEND1Q8N111 149 aa9.07□□□□□ -0.96
TCOF1-211ENST00000513346 KLF12Q9Y4X4 402 aa9.07□□□□□ -0.96
TCOF1-211ENST00000513346 TRBV20-1A0A075B6N2 111 aa9.07□□□□□ -0.96
TCOF1-211ENST00000513346 TMEM213A2RRL7 107 aa9.07□□□□□ -0.96
TCOF1-211ENST00000513346 IGKV3-20P01619 116 aa9.07□□□□□ -0.96
TCOF1-211ENST00000513346 EFNA4P52798 201 aa9.07□□□□□ -0.96
TCOF1-211ENST00000513346 LINC00173Q6ZV60 143 aa9.07□□□□□ -0.96
TCOF1-211ENST00000513346 K7ERJ3 54 aa9.06□□□□□ -0.96
TCOF1-211ENST00000513346 LINC01545Q5VT33 79 aa9.06□□□□□ -0.96
TCOF1-211ENST00000513346 ZNF474Q6S9Z5 364 aaPredicted RBP9.06□□□□□ -0.96
TCOF1-211ENST00000513346 LCNL1Q6ZST4 164 aa9.06□□□□□ -0.96
TCOF1-211ENST00000513346 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.06□□□□□ -0.96
TCOF1-211ENST00000513346 IGHV3-66A0A0C4DH42 116 aa9.06□□□□□ -0.96
TCOF1-211ENST00000513346 IGHV3-11P01762 117 aa9.06□□□□□ -0.96
TCOF1-211ENST00000513346 IGKV1-16P04430 117 aa9.06□□□□□ -0.96
TCOF1-211ENST00000513346 FRMD6-AS1P0C7T7 363 aa9.06□□□□□ -0.96
TCOF1-211ENST00000513346 NAV2Q8IVL1 2488 aa9.06□□□□□ -0.96
TCOF1-211ENST00000513346 TNFRSF6BO95407 300 aa9.06□□□□□ -0.96
TCOF1-211ENST00000513346 AMTNQ6UX39 209 aa9.06□□□□□ -0.96
TCOF1-211ENST00000513346 CLEC19AQ6UXS0 136 aa9.06□□□□□ -0.96
TCOF1-211ENST00000513346 IGKV1D-17A0A075B6S4 117 aa9.06□□□□□ -0.96
TCOF1-211ENST00000513346 MEIG1Q5JSS6 88 aa9.06□□□□□ -0.96
TCOF1-211ENST00000513346 PLCE1Q9P212 2302 aa9.06□□□□□ -0.96
TCOF1-211ENST00000513346 KIF26AQ9ULI4 1882 aaPredicted RBP9.05□□□□□ -0.96
TCOF1-211ENST00000513346 C9JAW5 83 aa9.05□□□□□ -0.96
TCOF1-211ENST00000513346 TIMM23O14925 209 aa9.05□□□□□ -0.96
TCOF1-211ENST00000513346 ODF3L1Q8IXM7 274 aa9.05□□□□□ -0.96
TCOF1-211ENST00000513346 ANKHD1Q8IWZ3 2542 aaKnown RBP9.05□□□□□ -0.96
TCOF1-211ENST00000513346 PRSS46E5RG02 174 aa9.05□□□□□ -0.96
TCOF1-211ENST00000513346 TMEM178BH3BS89 294 aa9.05□□□□□ -0.96
TCOF1-211ENST00000513346 ATXN8Q156A1 80 aa9.04□□□□□ -0.96
TCOF1-211ENST00000513346 MRPL51Q4U2R6 128 aaKnown RBP9.04□□□□□ -0.96
TCOF1-211ENST00000513346 ARHGAP21Q5T5U3 1957 aa9.04□□□□□ -0.96
TCOF1-211ENST00000513346 KIAA1671Q9BY89 1806 aa9.04□□□□□ -0.96
TCOF1-211ENST00000513346 HIVEP3Q5T1R4 2406 aa9.04□□□□□ -0.96
TCOF1-211ENST00000513346 CTRLP40313 264 aa9.04□□□□□ -0.96
TCOF1-211ENST00000513346 GAGE5Q13069 117 aa9.04□□□□□ -0.96
TCOF1-211ENST00000513346 GAGE6Q13070 117 aa9.04□□□□□ -0.96
TCOF1-211ENST00000513346 TMEM75Q8N9X5 138 aa9.04□□□□□ -0.96
TCOF1-211ENST00000513346 WFDC12Q8WWY7 111 aa9.04□□□□□ -0.96
TCOF1-211ENST00000513346 C12orf74Q32Q52 190 aa9.04□□□□□ -0.96
TCOF1-211ENST00000513346 C2orf82Q6UX34 121 aa9.04□□□□□ -0.96
TCOF1-211ENST00000513346 PCP2Q8IVA1 136 aa9.04□□□□□ -0.96
TCOF1-211ENST00000513346 TLN2Q9Y4G6 2542 aa9.04□□□□□ -0.96
TCOF1-211ENST00000513346 FXYD5Q96DB9 178 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms