RNA–Protein interactions for RNA: ENST00000512648.5

SPOCK3-221, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 1 (best) BASIC

Gene SPOCK3, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-221ENST00000512648 IGHV3OR16-13A0A075B7E8 117 aa18.52■□□□□ 0.56
SPOCK3-221ENST00000512648 IGHV3-49A0A0A0MS15 119 aa18.52■□□□□ 0.56
SPOCK3-221ENST00000512648 IGHV3-74A0A0B4J1X5 117 aa18.52■□□□□ 0.56
SPOCK3-221ENST00000512648 RBAKDNA6NC62 111 aa18.52■□□□□ 0.56
SPOCK3-221ENST00000512648 MGST1P10620 155 aaKnown RBP18.52■□□□□ 0.56
SPOCK3-221ENST00000512648 LCN12Q6JVE5 192 aa18.52■□□□□ 0.56
SPOCK3-221ENST00000512648 COX8CQ7Z4L0 72 aa18.52■□□□□ 0.56
SPOCK3-221ENST00000512648 FAM210BQ96KR6 192 aa18.52■□□□□ 0.56
SPOCK3-221ENST00000512648 IGHV4OR15-8A0A075B7B6 117 aa18.52■□□□□ 0.55
SPOCK3-221ENST00000512648 A0A087WW49 117 aa18.52■□□□□ 0.55
SPOCK3-221ENST00000512648 TGIF2-C20orf24A0A0A6YYL0 155 aa18.52■□□□□ 0.55
SPOCK3-221ENST00000512648 IBA57Q5T440 356 aaKnown RBP18.52■□□□□ 0.55
SPOCK3-221ENST00000512648 C8orf86Q6ZUL3 223 aa18.52■□□□□ 0.55
SPOCK3-221ENST00000512648 MLXQ9UH92 298 aa18.52■□□□□ 0.55
SPOCK3-221ENST00000512648 TRAV8-2A0A0B4J237 113 aa18.51■□□□□ 0.55
SPOCK3-221ENST00000512648 KLF5Q13887 457 aaPredicted RBP18.51■□□□□ 0.55
SPOCK3-221ENST00000512648 SAMD13Q5VXD3 122 aa18.51■□□□□ 0.55
SPOCK3-221ENST00000512648 TYMSP04818 313 aa18.5■□□□□ 0.55
SPOCK3-221ENST00000512648 LINC01006Q8NI28 216 aa18.5■□□□□ 0.55
SPOCK3-221ENST00000512648 RNASE7Q9H1E1 156 aaKnown RBP18.5■□□□□ 0.55
SPOCK3-221ENST00000512648 TLN2Q9Y4G6 2542 aa18.49■□□□□ 0.55
SPOCK3-221ENST00000512648 TRAV8-1A0A0A6YYK1 113 aa18.49■□□□□ 0.55
SPOCK3-221ENST00000512648 TMEM213A2RRL7 107 aa18.49■□□□□ 0.55
SPOCK3-221ENST00000512648 HOXD3P31249 432 aaPredicted RBP18.49■□□□□ 0.55
SPOCK3-221ENST00000512648 PRNTQ86SH4 94 aa18.49■□□□□ 0.55
SPOCK3-221ENST00000512648 SGK494Q96LW2 274 aa18.49■□□□□ 0.55
SPOCK3-221ENST00000512648 MYO9AB2RTY4 2548 aa18.49■□□□□ 0.55
SPOCK3-221ENST00000512648 C19orf71A6NCJ1 209 aa18.48■□□□□ 0.55
SPOCK3-221ENST00000512648 SOCS3O14543 225 aa18.48■□□□□ 0.55
SPOCK3-221ENST00000512648 SAPCD1Q5SSQ6 148 aa18.48■□□□□ 0.55
SPOCK3-221ENST00000512648 NHLRC2Q8NBF2 726 aa18.48■□□□□ 0.55
SPOCK3-221ENST00000512648 NUDT10Q8NFP7 164 aa18.48■□□□□ 0.55
SPOCK3-221ENST00000512648 NUDT11Q96G61 164 aa18.48■□□□□ 0.55
SPOCK3-221ENST00000512648 NRN1Q9NPD7 142 aa18.48■□□□□ 0.55
SPOCK3-221ENST00000512648 ACANP16112 2415 aa18.47■□□□□ 0.55
SPOCK3-221ENST00000512648 LINC01619G3V211 115 aa18.47■□□□□ 0.55
SPOCK3-221ENST00000512648 SRD5A3Q9H8P0 318 aa18.47■□□□□ 0.55
SPOCK3-221ENST00000512648 PPP1R14DQ9NXH3 145 aa18.47■□□□□ 0.55
SPOCK3-221ENST00000512648 C1orf196B1AJZ1 125 aa18.46■□□□□ 0.55
SPOCK3-221ENST00000512648 GATCO43716 136 aaKnown RBP18.46■□□□□ 0.55
SPOCK3-221ENST00000512648 CT83Q5H943 113 aa18.46■□□□□ 0.55
SPOCK3-221ENST00000512648 SONP18583 2426 aaKnown RBP18.46■□□□□ 0.55
SPOCK3-221ENST00000512648 HLA-DMBP28068 263 aa18.46■□□□□ 0.54
SPOCK3-221ENST00000512648 RPS10P46783 165 aaKnown RBP18.46■□□□□ 0.54
SPOCK3-221ENST00000512648 C16orf92Q96LL3 132 aa18.46■□□□□ 0.54
SPOCK3-221ENST00000512648 SMIM27A0A1W2PRY6 76 aa18.45■□□□□ 0.54
SPOCK3-221ENST00000512648 NPIPB6E9PJ23 425 aa18.45■□□□□ 0.54
SPOCK3-221ENST00000512648 SYNJ2BPP57105 145 aa18.45■□□□□ 0.54
SPOCK3-221ENST00000512648 FAM3BP58499 235 aaPredicted RBP18.45■□□□□ 0.54
SPOCK3-221ENST00000512648 IGFL4Q6B9Z1 124 aa18.45■□□□□ 0.54
SPOCK3-221ENST00000512648 OR1N2Q8NGR9 330 aa18.45■□□□□ 0.54
SPOCK3-221ENST00000512648 A0A1W2PPQ1 181 aa18.44■□□□□ 0.54
SPOCK3-221ENST00000512648 ZNF705GA8MUZ8 300 aaPredicted RBP18.44■□□□□ 0.54
SPOCK3-221ENST00000512648 OR4B1Q8NGF8 309 aa18.44■□□□□ 0.54
SPOCK3-221ENST00000512648 IGKV2-40A0A087WW87 121 aaPredicted RBP18.43■□□□□ 0.54
SPOCK3-221ENST00000512648 ZNF705FA8MVS1 300 aaPredicted RBP18.43■□□□□ 0.54
SPOCK3-221ENST00000512648 IGKV2D-40P01614 121 aaPredicted RBP18.43■□□□□ 0.54
SPOCK3-221ENST00000512648 RAB5BP61020 215 aa18.43■□□□□ 0.54
SPOCK3-221ENST00000512648 DPF1Q92782 380 aa18.43■□□□□ 0.54
SPOCK3-221ENST00000512648 PRR25Q96S07 402 aa18.43■□□□□ 0.54
SPOCK3-221ENST00000512648 ANK3Q12955 4377 aaKnown RBP18.43■□□□□ 0.54
SPOCK3-221ENST00000512648 INAFM1C9JVW0 142 aa18.42■□□□□ 0.54
SPOCK3-221ENST00000512648 CBLN1P23435 193 aa18.42■□□□□ 0.54
SPOCK3-221ENST00000512648 LINC00322Q6ZN03 302 aaPredicted RBP18.42■□□□□ 0.54
SPOCK3-221ENST00000512648 C9orf47Q6ZRZ4 202 aa18.42■□□□□ 0.54
SPOCK3-221ENST00000512648 C18orf65Q6ZTR6 163 aa18.42■□□□□ 0.54
SPOCK3-221ENST00000512648 TCF24Q7RTU0 167 aa18.42■□□□□ 0.54
SPOCK3-221ENST00000512648 RNF182Q8N6D2 247 aa18.42■□□□□ 0.54
SPOCK3-221ENST00000512648 OR11H1Q8NG94 326 aa18.42■□□□□ 0.54
SPOCK3-221ENST00000512648 DAZAP1Q96EP5 407 aaKnown RBP18.42■□□□□ 0.54
SPOCK3-221ENST00000512648 HIVEP2P31629 2446 aa18.42■□□□□ 0.54
SPOCK3-221ENST00000512648 C2orf70A6NJV1 201 aa18.41■□□□□ 0.54
SPOCK3-221ENST00000512648 PRAC2D3DTV9 90 aa18.41■□□□□ 0.54
SPOCK3-221ENST00000512648 RPL19P84098 196 aaKnown RBP18.41■□□□□ 0.54
SPOCK3-221ENST00000512648 GBGT1Q8N5D6 347 aa18.41■□□□□ 0.54
SPOCK3-221ENST00000512648 VGLL1Q99990 258 aa18.41■□□□□ 0.54
SPOCK3-221ENST00000512648 FAM231BA6NCW3 169 aa18.4■□□□□ 0.54
SPOCK3-221ENST00000512648 OVOL1O14753 267 aa18.4■□□□□ 0.54
SPOCK3-221ENST00000512648 TCF21O43680 179 aa18.4■□□□□ 0.54
SPOCK3-221ENST00000512648 PRR27Q6MZM9 219 aa18.4■□□□□ 0.54
SPOCK3-221ENST00000512648 KLHL30-AS1Q8NEE0 82 aa18.4■□□□□ 0.54
SPOCK3-221ENST00000512648 TSKUQ8WUA8 353 aa18.4■□□□□ 0.54
SPOCK3-221ENST00000512648 ZC2HC1AQ96GY0 325 aa18.4■□□□□ 0.54
SPOCK3-221ENST00000512648 RPP21Q9H633 154 aaKnown RBP18.4■□□□□ 0.54
SPOCK3-221ENST00000512648 PEMTQ9UBM1 199 aa18.4■□□□□ 0.54
SPOCK3-221ENST00000512648 CRLF1O75462 422 aa18.39■□□□□ 0.54
SPOCK3-221ENST00000512648 P01737 135 aa18.39■□□□□ 0.54
SPOCK3-221ENST00000512648 GFRA4Q9GZZ7 299 aa18.39■□□□□ 0.54
SPOCK3-221ENST00000512648 LENEPQ9Y5L5 61 aa18.39■□□□□ 0.54
SPOCK3-221ENST00000512648 TSSC4Q9Y5U2 329 aaPredicted RBP18.39■□□□□ 0.54
SPOCK3-221ENST00000512648 NOTCH2Q04721 2471 aa18.39■□□□□ 0.53
SPOCK3-221ENST00000512648 A8MWL6 223 aa18.39■□□□□ 0.53
SPOCK3-221ENST00000512648 M0QZ24 198 aa18.39■□□□□ 0.53
SPOCK3-221ENST00000512648 ID1P41134 155 aa18.39■□□□□ 0.53
SPOCK3-221ENST00000512648 PROK1P58294 105 aa18.39■□□□□ 0.53
SPOCK3-221ENST00000512648 DCANP1Q8TF63 244 aa18.39■□□□□ 0.53
SPOCK3-221ENST00000512648 NDFIP1Q9BT67 221 aa18.39■□□□□ 0.53
SPOCK3-221ENST00000512648 AGPAT4-IT1Q9H0P7 198 aa18.39■□□□□ 0.53
SPOCK3-221ENST00000512648 PHOX2AO14813 284 aa18.38■□□□□ 0.53
SPOCK3-221ENST00000512648 CT45A10P0DMU9 189 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms