RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 HSPB11Q9Y547 144 aa11.78□□□□□ -0.52
DDX41-213ENST00000512027 YTHDF2Q9Y5A9 579 aaKnown RBP11.78□□□□□ -0.52
DDX41-213ENST00000512027 IGHV4-4A0A075B6R2 117 aa11.77□□□□□ -0.53
DDX41-213ENST00000512027 DEFB131BA0A096LNP1 70 aa11.77□□□□□ -0.53
DDX41-213ENST00000512027 TMEM189A5PLL7 270 aa11.77□□□□□ -0.53
DDX41-213ENST00000512027 PTTG1O95997 202 aa11.77□□□□□ -0.53
DDX41-213ENST00000512027 AMBPP02760 352 aa11.77□□□□□ -0.53
DDX41-213ENST00000512027 SPART-AS1P0CW21 52 aa11.77□□□□□ -0.53
DDX41-213ENST00000512027 RPL12P30050 165 aaKnown RBP11.77□□□□□ -0.53
DDX41-213ENST00000512027 ATP5SQ99766 215 aa11.77□□□□□ -0.53
DDX41-213ENST00000512027 SLC25A2Q9BXI2 301 aa11.77□□□□□ -0.53
DDX41-213ENST00000512027 DKK2Q9UBU2 259 aa11.77□□□□□ -0.53
DDX41-213ENST00000512027 DNAH10Q8IVF4 4471 aa11.76□□□□□ -0.53
DDX41-213ENST00000512027 TRBV19A0A075B6N1 114 aa11.76□□□□□ -0.53
DDX41-213ENST00000512027 M0R3E3 92 aa11.76□□□□□ -0.53
DDX41-213ENST00000512027 NDUFB4O95168 129 aa11.76□□□□□ -0.53
DDX41-213ENST00000512027 PET100P0DJ07 73 aa11.76□□□□□ -0.53
DDX41-213ENST00000512027 AZU1P20160 251 aa11.76□□□□□ -0.53
DDX41-213ENST00000512027 LGALS9CQ6DKI2 356 aa11.76□□□□□ -0.53
DDX41-213ENST00000512027 BLNKQ8WV28 456 aa11.76□□□□□ -0.53
DDX41-213ENST00000512027 FAM167A-AS1Q96KT0 104 aa11.76□□□□□ -0.53
DDX41-213ENST00000512027 DNAH6Q9C0G6 4158 aa11.75□□□□□ -0.53
DDX41-213ENST00000512027 J3KRW8 73 aa11.75□□□□□ -0.53
DDX41-213ENST00000512027 EIF3GO75821 320 aaKnown RBP eCLIP11.75□□□□□ -0.53
DDX41-213ENST00000512027 FCN2Q15485 313 aa11.75□□□□□ -0.53
DDX41-213ENST00000512027 GUK1Q16774 197 aa11.75□□□□□ -0.53
DDX41-213ENST00000512027 OR10J6PQ8NGY7 276 aa11.75□□□□□ -0.53
DDX41-213ENST00000512027 WFDC1Q9HC57 220 aa11.75□□□□□ -0.53
DDX41-213ENST00000512027 TMEM14CQ9P0S9 112 aa11.75□□□□□ -0.53
DDX41-213ENST00000512027 BIRC6Q9NR09 4857 aa11.74□□□□□ -0.53
DDX41-213ENST00000512027 HIST1H1EP10412 219 aaKnown RBP11.74□□□□□ -0.53
DDX41-213ENST00000512027 HTN1P15515 57 aa11.74□□□□□ -0.53
DDX41-213ENST00000512027 HTN3P15516 51 aa11.74□□□□□ -0.53
DDX41-213ENST00000512027 CDKN1BP46527 198 aa11.74□□□□□ -0.53
DDX41-213ENST00000512027 EXOC3-AS1Q8N2X6 119 aa11.74□□□□□ -0.53
DDX41-213ENST00000512027 LINC01587Q99440 93 aa11.74□□□□□ -0.53
DDX41-213ENST00000512027 NIPSNAP3BQ9BS92 247 aa11.74□□□□□ -0.53
DDX41-213ENST00000512027 FRAS1Q86XX4 4008 aa11.74□□□□□ -0.53
DDX41-213ENST00000512027 OR10J4P0C629 311 aa11.73□□□□□ -0.53
DDX41-213ENST00000512027 CT45A10P0DMU9 189 aa11.73□□□□□ -0.53
DDX41-213ENST00000512027 ERCC8Q13216 396 aa11.73□□□□□ -0.53
DDX41-213ENST00000512027 FFAR4Q5NUL3 377 aa11.73□□□□□ -0.53
DDX41-213ENST00000512027 TIMM9Q9Y5J7 89 aa11.73□□□□□ -0.53
DDX41-213ENST00000512027 PLAC8L1A1L4L8 177 aa11.72□□□□□ -0.53
DDX41-213ENST00000512027 NPIPB6E9PJ23 425 aa11.72□□□□□ -0.53
DDX41-213ENST00000512027 C17orf112F2Z3M2 114 aa11.72□□□□□ -0.53
DDX41-213ENST00000512027 ZNF253O75346 499 aa11.72□□□□□ -0.53
DDX41-213ENST00000512027 GFI1BQ5VTD9 330 aa11.72□□□□□ -0.53
DDX41-213ENST00000512027 MED28Q9H204 178 aa11.72□□□□□ -0.53
DDX41-213ENST00000512027 KCNIP2Q9NS61 270 aa11.72□□□□□ -0.53
DDX41-213ENST00000512027 FUT9Q9Y231 359 aa11.72□□□□□ -0.53
DDX41-213ENST00000512027 IFNA5P01569 189 aa11.71□□□□□ -0.53
DDX41-213ENST00000512027 TCTAP57738 103 aa11.71□□□□□ -0.53
DDX41-213ENST00000512027 DAD1P61803 113 aa11.71□□□□□ -0.53
DDX41-213ENST00000512027 FXYD5Q96DB9 178 aa11.71□□□□□ -0.53
DDX41-213ENST00000512027 ZNF503Q96F45 646 aa11.71□□□□□ -0.53
DDX41-213ENST00000512027 PHYHIPLQ96FC7 376 aa11.71□□□□□ -0.53
DDX41-213ENST00000512027 MRPL32Q9BYC8 188 aaKnown RBP11.71□□□□□ -0.53
DDX41-213ENST00000512027 OR51M1Q9H341 326 aa11.71□□□□□ -0.53
DDX41-213ENST00000512027 IGKV2-40A0A087WW87 121 aaPredicted RBP11.7□□□□□ -0.54
DDX41-213ENST00000512027 TEX48A0A1B0GUV7 120 aa11.7□□□□□ -0.54
DDX41-213ENST00000512027 IGKV2D-40P01614 121 aaPredicted RBP11.7□□□□□ -0.54
DDX41-213ENST00000512027 ICAM4Q14773 271 aa11.7□□□□□ -0.54
DDX41-213ENST00000512027 Q5BKY6 102 aa11.7□□□□□ -0.54
DDX41-213ENST00000512027 FAM122CQ6P4D5 195 aa11.7□□□□□ -0.54
DDX41-213ENST00000512027 SCGB1C1Q8TD33 95 aa11.7□□□□□ -0.54
DDX41-213ENST00000512027 PAXXQ9BUH6 204 aa11.7□□□□□ -0.54
DDX41-213ENST00000512027 OR7C2O60412 319 aa11.69□□□□□ -0.54
DDX41-213ENST00000512027 NBEAP1P0C6P0 100 aa11.69□□□□□ -0.54
DDX41-213ENST00000512027 DEFB130BP0DP73 79 aa11.69□□□□□ -0.54
DDX41-213ENST00000512027 DEFB130AP0DP74 79 aa11.69□□□□□ -0.54
DDX41-213ENST00000512027 TSPOP30536 169 aa11.69□□□□□ -0.54
DDX41-213ENST00000512027 TAS2R60P59551 318 aa11.69□□□□□ -0.54
DDX41-213ENST00000512027 PDE6HQ13956 83 aa11.69□□□□□ -0.54
DDX41-213ENST00000512027 TMEM256Q8N2U0 113 aa11.69□□□□□ -0.54
DDX41-213ENST00000512027 MRPL53Q96EL3 112 aaKnown RBP11.69□□□□□ -0.54
DDX41-213ENST00000512027 TRAV12-3A0A0B4J271 114 aa11.68□□□□□ -0.54
DDX41-213ENST00000512027 RNF141Q8WVD5 230 aa11.68□□□□□ -0.54
DDX41-213ENST00000512027 NDUFAF3Q9BU61 184 aa11.68□□□□□ -0.54
DDX41-213ENST00000512027 AGPAT4-IT1Q9H0P7 198 aa11.68□□□□□ -0.54
DDX41-213ENST00000512027 AAMDCQ9H7C9 122 aa11.68□□□□□ -0.54
DDX41-213ENST00000512027 LYRM9A8MSI8 78 aa11.67□□□□□ -0.54
DDX41-213ENST00000512027 H7BYZ3 331 aa11.67□□□□□ -0.54
DDX41-213ENST00000512027 LEPP41159 167 aa11.67□□□□□ -0.54
DDX41-213ENST00000512027 RAB2AP61019 212 aa11.67□□□□□ -0.54
DDX41-213ENST00000512027 UBE2L3P68036 154 aaKnown RBP11.67□□□□□ -0.54
DDX41-213ENST00000512027 OXA1LQ15070 435 aa11.67□□□□□ -0.54
DDX41-213ENST00000512027 VGLL1Q99990 258 aa11.67□□□□□ -0.54
DDX41-213ENST00000512027 PRELID1Q9Y255 219 aa11.67□□□□□ -0.54
DDX41-213ENST00000512027 BTN1A1Q13410 526 aa11.66□□□□□ -0.54
DDX41-213ENST00000512027 RNASE8Q8TDE3 154 aaKnown RBP11.66□□□□□ -0.54
DDX41-213ENST00000512027 C16orf74Q96GX8 76 aa11.66□□□□□ -0.54
DDX41-213ENST00000512027 ODF3Q96PU9 254 aa11.66□□□□□ -0.54
DDX41-213ENST00000512027 NOP10Q9NPE3 64 aaKnown RBP11.66□□□□□ -0.54
DDX41-213ENST00000512027 HMGB3O15347 200 aaKnown RBP11.65□□□□□ -0.54
DDX41-213ENST00000512027 RANP62826 216 aaKnown RBP11.65□□□□□ -0.54
DDX41-213ENST00000512027 CD300CQ08708 224 aa11.65□□□□□ -0.54
DDX41-213ENST00000512027 PRR9Q5T870 116 aa11.65□□□□□ -0.54
DDX41-213ENST00000512027 TMEM88Q6PEY1 159 aa11.65□□□□□ -0.54
DDX41-213ENST00000512027 Q6ZQT7 251 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms