RNA–Protein interactions for RNA: ENST00000510884.5

NUP54-210, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-210ENST00000510884 TRGV5A0A0B4J1U4 118 aa3.87□□□□□ -1.79
NUP54-210ENST00000510884 IGHV1-58A0A0C4DH39 117 aa3.87□□□□□ -1.79
NUP54-210ENST00000510884 SRRM4A7MD48 611 aaKnown RBP3.87□□□□□ -1.79
NUP54-210ENST00000510884 A8MWL6 223 aa3.87□□□□□ -1.79
NUP54-210ENST00000510884 SNURFLB1AK76 121 aa3.87□□□□□ -1.79
NUP54-210ENST00000510884 E9PLD3 99 aa3.87□□□□□ -1.79
NUP54-210ENST00000510884 C11orf98E9PRG8 122 aa3.87□□□□□ -1.79
NUP54-210ENST00000510884 LINC01619G3V211 115 aa3.87□□□□□ -1.79
NUP54-210ENST00000510884 H3BT86 120 aa3.87□□□□□ -1.79
NUP54-210ENST00000510884 J3QT63 122 aa3.87□□□□□ -1.79
NUP54-210ENST00000510884 K7EMT4 169 aa3.87□□□□□ -1.79
NUP54-210ENST00000510884 UPK2O00526 184 aa3.87□□□□□ -1.79
NUP54-210ENST00000510884 UBE2L6O14933 153 aa3.87□□□□□ -1.79
NUP54-210ENST00000510884 PDCD6O75340 191 aa3.87□□□□□ -1.79
NUP54-210ENST00000510884 SERF1AO75920 110 aa3.87□□□□□ -1.79
NUP54-210ENST00000510884 C3orf79P0CE67 100 aa3.87□□□□□ -1.79
NUP54-210ENST00000510884 HLA-DRB4P13762 266 aa3.87□□□□□ -1.79
NUP54-210ENST00000510884 IGLL1P15814 213 aa3.87□□□□□ -1.79
NUP54-210ENST00000510884 GFERP55789 205 aa3.87□□□□□ -1.79
NUP54-210ENST00000510884 FUT5Q11128 374 aa3.87□□□□□ -1.79
NUP54-210ENST00000510884 ZNF726P1Q15940 193 aa3.87□□□□□ -1.79
NUP54-210ENST00000510884 NMSQ5H8A3 153 aa3.87□□□□□ -1.79
NUP54-210ENST00000510884 KTN1-AS1Q86SY8 53 aa3.87□□□□□ -1.79
NUP54-210ENST00000510884 OR5AS1Q8N127 324 aa3.87□□□□□ -1.79
NUP54-210ENST00000510884 RNF182Q8N6D2 247 aa3.87□□□□□ -1.79
NUP54-210ENST00000510884 FAM213BQ8TBF2 198 aa3.87□□□□□ -1.79
NUP54-210ENST00000510884 CYYR1Q96J86 154 aa3.87□□□□□ -1.79
NUP54-210ENST00000510884 C2orf50Q96LR7 162 aa3.87□□□□□ -1.79
NUP54-210ENST00000510884 DEFB127Q9H1M4 99 aa3.87□□□□□ -1.79
NUP54-210ENST00000510884 OTORQ9NRC9 128 aa3.87□□□□□ -1.79
NUP54-210ENST00000510884 CKLFQ9UBR5 152 aa3.87□□□□□ -1.79
NUP54-210ENST00000510884 PRO0461Q9UI25 63 aa3.87□□□□□ -1.79
NUP54-210ENST00000510884 HLA-DRB4X5D2U9 266 aa3.87□□□□□ -1.79
NUP54-210ENST00000510884 DNAH12Q6ZR08 3092 aa3.87□□□□□ -1.79
NUP54-210ENST00000510884 DENND4CQ5VZ89 1909 aa3.87□□□□□ -1.79
NUP54-210ENST00000510884 BAZ2AQ9UIF9 1905 aaKnown RBP3.87□□□□□ -1.79
NUP54-210ENST00000510884 ZFYVE26Q68DK2 2539 aa3.87□□□□□ -1.79
NUP54-210ENST00000510884 PATJQ8NI35 1801 aa3.86□□□□□ -1.79
NUP54-210ENST00000510884 A0A0A6YYD4 124 aa3.86□□□□□ -1.79
NUP54-210ENST00000510884 TRAV8-1A0A0A6YYK1 113 aa3.86□□□□□ -1.79
NUP54-210ENST00000510884 TRBV5-5A0A0J9YX44 114 aa3.86□□□□□ -1.79
NUP54-210ENST00000510884 WI2-2373I1.2A0A1W2PRP0 233 aa3.86□□□□□ -1.79
NUP54-210ENST00000510884 GRIFINA4D1Z8 144 aa3.86□□□□□ -1.79
NUP54-210ENST00000510884 K7EQD1 137 aa3.86□□□□□ -1.79
NUP54-210ENST00000510884 RTL8CO15255 209 aa3.86□□□□□ -1.79
NUP54-210ENST00000510884 SS18L1O75177 396 aaPredicted RBP3.86□□□□□ -1.79
NUP54-210ENST00000510884 ACYP1P07311 99 aa3.86□□□□□ -1.79
NUP54-210ENST00000510884 COX6A1P12074 109 aa3.86□□□□□ -1.79
NUP54-210ENST00000510884 CCL1P22362 96 aa3.86□□□□□ -1.79
NUP54-210ENST00000510884 DAPP51397 102 aa3.86□□□□□ -1.79
NUP54-210ENST00000510884 SNRPFP62306 86 aaKnown RBP3.86□□□□□ -1.79
NUP54-210ENST00000510884 UBE2L3P68036 154 aaKnown RBP3.86□□□□□ -1.79
NUP54-210ENST00000510884 WFDC2Q14508 124 aa3.86□□□□□ -1.79
NUP54-210ENST00000510884 ZNF791Q3KP31 576 aaPredicted RBP3.86□□□□□ -1.79
NUP54-210ENST00000510884 DNM1P46Q6ZS02 220 aa3.86□□□□□ -1.79
NUP54-210ENST00000510884 KRTAP5-2Q701N4 177 aa3.86□□□□□ -1.79
NUP54-210ENST00000510884 SPATA12Q7Z6I5 190 aa3.86□□□□□ -1.79
NUP54-210ENST00000510884 PIANPQ8IYJ0 282 aa3.86□□□□□ -1.79
NUP54-210ENST00000510884 TMEM256Q8N2U0 113 aa3.86□□□□□ -1.79
NUP54-210ENST00000510884 LINC00311Q8N616 119 aa3.86□□□□□ -1.79
NUP54-210ENST00000510884 APCDD1LQ8NCL9 501 aa3.86□□□□□ -1.79
NUP54-210ENST00000510884 FGF11Q92914 225 aa3.86□□□□□ -1.79
NUP54-210ENST00000510884 C2orf48Q96LS8 159 aa3.86□□□□□ -1.79
NUP54-210ENST00000510884 OR2A5Q96R48 311 aa3.86□□□□□ -1.79
NUP54-210ENST00000510884 OR8B2Q96RD0 313 aa3.86□□□□□ -1.79
NUP54-210ENST00000510884 PAXXQ9BUH6 204 aa3.86□□□□□ -1.79
NUP54-210ENST00000510884 HIGD1BQ9P298 99 aa3.86□□□□□ -1.79
NUP54-210ENST00000510884 RALGAPA1Q6GYQ0 2036 aa3.86□□□□□ -1.79
NUP54-210ENST00000510884 TOGARAM1Q9Y4F4 1720 aa3.86□□□□□ -1.79
NUP54-210ENST00000510884 SPEGQ15772 3267 aa3.86□□□□□ -1.79
NUP54-210ENST00000510884 SIPA1L3O60292 1781 aaPredicted RBP3.86□□□□□ -1.79
NUP54-210ENST00000510884 TRPM7Q96QT4 1865 aa3.86□□□□□ -1.79
NUP54-210ENST00000510884 LY75O60449 1722 aa3.85□□□□□ -1.79
NUP54-210ENST00000510884 TRAV1-2A0A0B4J238 106 aa3.85□□□□□ -1.79
NUP54-210ENST00000510884 RBAKDNA6NC62 111 aa3.85□□□□□ -1.79
NUP54-210ENST00000510884 SCRG1O75711 98 aa3.85□□□□□ -1.79
NUP54-210ENST00000510884 IGKV1D-16P01601 117 aa3.85□□□□□ -1.79
NUP54-210ENST00000510884 IGKCP01834 107 aa3.85□□□□□ -1.79
NUP54-210ENST00000510884 SCGB1C2P0DMR2 95 aa3.85□□□□□ -1.79
NUP54-210ENST00000510884 LGALS3P17931 250 aaKnown RBP3.85□□□□□ -1.79
NUP54-210ENST00000510884 PTGDSP41222 190 aa3.85□□□□□ -1.79
NUP54-210ENST00000510884 PSMB2P49721 201 aa3.85□□□□□ -1.79
NUP54-210ENST00000510884 CCL23P55773 120 aa3.85□□□□□ -1.79
NUP54-210ENST00000510884 ADIGQ0VDE8 80 aa3.85□□□□□ -1.79
NUP54-210ENST00000510884 CENPWQ5EE01 88 aa3.85□□□□□ -1.79
NUP54-210ENST00000510884 FAM78AQ5JUQ0 283 aa3.85□□□□□ -1.79
NUP54-210ENST00000510884 CFAP126Q5VTH2 177 aa3.85□□□□□ -1.79
NUP54-210ENST00000510884 RPL7L1Q6DKI1 246 aaKnown RBP3.85□□□□□ -1.79
NUP54-210ENST00000510884 PVRIGQ6DKI7 326 aa3.85□□□□□ -1.79
NUP54-210ENST00000510884 Q6ZS49 121 aa3.85□□□□□ -1.79
NUP54-210ENST00000510884 HMGN2P46Q86SG4 172 aa3.85□□□□□ -1.79
NUP54-210ENST00000510884 LRTM2Q8N967 370 aa3.85□□□□□ -1.79
NUP54-210ENST00000510884 ZNF564Q8TBZ8 553 aaPredicted RBP3.85□□□□□ -1.79
NUP54-210ENST00000510884 KLK6Q92876 244 aa3.85□□□□□ -1.79
NUP54-210ENST00000510884 FGF13Q92913 245 aa3.85□□□□□ -1.79
NUP54-210ENST00000510884 FAM3DQ96BQ1 224 aa3.85□□□□□ -1.79
NUP54-210ENST00000510884 C18orf15Q96N68 181 aa3.85□□□□□ -1.79
NUP54-210ENST00000510884 HDHD3Q9BSH5 251 aaPredicted RBP3.85□□□□□ -1.79
NUP54-210ENST00000510884 NUP210Q8TEM1 1887 aaPredicted RBP3.85□□□□□ -1.79
NUP54-210ENST00000510884 HELZP42694 1942 aaKnown RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms