RNA–Protein interactions for RNA: ENST00000510852.1

USP53-207, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 2,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-207ENST00000510852 COL8A2P25067 703 aa7.5□□□□□ -1.21
USP53-207ENST00000510852 FOXA3P55318 350 aaPredicted RBP7.5□□□□□ -1.21
USP53-207ENST00000510852 ZNF79Q15937 498 aa7.5□□□□□ -1.21
USP53-207ENST00000510852 VMA21Q3ZAQ7 101 aa7.5□□□□□ -1.21
USP53-207ENST00000510852 NUP35Q8NFH5 326 aa7.5□□□□□ -1.21
USP53-207ENST00000510852 C15orf40Q8WUR7 153 aa7.5□□□□□ -1.21
USP53-207ENST00000510852 RTN4IP1Q8WWV3 396 aaPredicted RBP7.5□□□□□ -1.21
USP53-207ENST00000510852 FXYD5Q96DB9 178 aa7.5□□□□□ -1.21
USP53-207ENST00000510852 CYYR1Q96J86 154 aa7.5□□□□□ -1.21
USP53-207ENST00000510852 AKAP6Q13023 2319 aa7.5□□□□□ -1.21
USP53-207ENST00000510852 CENPEQ02224 2701 aa7.49□□□□□ -1.21
USP53-207ENST00000510852 IGHV3OR15-7A0A075B7D8 119 aa7.49□□□□□ -1.21
USP53-207ENST00000510852 HLA-DQB1P01920 261 aa7.49□□□□□ -1.21
USP53-207ENST00000510852 COA6Q5JTJ3 125 aaKnown RBP7.49□□□□□ -1.21
USP53-207ENST00000510852 DNM1P46Q6ZS02 220 aa7.49□□□□□ -1.21
USP53-207ENST00000510852 LINC00596Q86U02 117 aa7.49□□□□□ -1.21
USP53-207ENST00000510852 ARHGAP5-AS1Q96IT6 56 aa7.49□□□□□ -1.21
USP53-207ENST00000510852 LIME1Q9H400 295 aa7.49□□□□□ -1.21
USP53-207ENST00000510852 K7EP34 96 aa7.49□□□□□ -1.21
USP53-207ENST00000510852 PTHLHP12272 177 aa7.49□□□□□ -1.21
USP53-207ENST00000510852 BTCP35070 178 aa7.49□□□□□ -1.21
USP53-207ENST00000510852 MPV17LQ2QL34 196 aa7.49□□□□□ -1.21
USP53-207ENST00000510852 PYDC2Q56P42 97 aa7.49□□□□□ -1.21
USP53-207ENST00000510852 Q6P435 159 aa7.49□□□□□ -1.21
USP53-207ENST00000510852 DPH3Q96FX2 82 aa7.49□□□□□ -1.21
USP53-207ENST00000510852 TMEM191AQ9H0A3 160 aa7.49□□□□□ -1.21
USP53-207ENST00000510852 USF3Q68DE3 2245 aa7.48□□□□□ -1.21
USP53-207ENST00000510852 TFF1P04155 84 aa7.48□□□□□ -1.21
USP53-207ENST00000510852 P0DMU3 169 aa7.48□□□□□ -1.21
USP53-207ENST00000510852 FAM231AP0DMU4 169 aa7.48□□□□□ -1.21
USP53-207ENST00000510852 FAM231CP0DMU5 169 aa7.48□□□□□ -1.21
USP53-207ENST00000510852 CRYBB3P26998 211 aa7.48□□□□□ -1.21
USP53-207ENST00000510852 OPRK1P41145 380 aa7.48□□□□□ -1.21
USP53-207ENST00000510852 RPS10P46783 165 aaKnown RBP7.48□□□□□ -1.21
USP53-207ENST00000510852 NMUP48645 174 aa7.48□□□□□ -1.21
USP53-207ENST00000510852 EFNA4P52798 201 aa7.48□□□□□ -1.21
USP53-207ENST00000510852 KRTAP10-9P60411 292 aa7.48□□□□□ -1.21
USP53-207ENST00000510852 ZNF260Q3ZCT1 412 aa7.48□□□□□ -1.21
USP53-207ENST00000510852 MRPL54Q6P161 138 aaKnown RBP7.48□□□□□ -1.21
USP53-207ENST00000510852 UNQ9165/PRO28630Q6UXU0 137 aa7.48□□□□□ -1.21
USP53-207ENST00000510852 C6orf201Q7Z4U5 140 aa7.48□□□□□ -1.21
USP53-207ENST00000510852 DEFB108BQ8NET1 73 aa7.48□□□□□ -1.21
USP53-207ENST00000510852 DSCAMO60469 2012 aa7.48□□□□□ -1.21
USP53-207ENST00000510852 IGKV1D-17A0A075B6S4 117 aa7.48□□□□□ -1.21
USP53-207ENST00000510852 MUC21A0A0G2JKD1 596 aa7.48□□□□□ -1.21
USP53-207ENST00000510852 TMEM235A6NFC5 223 aa7.48□□□□□ -1.21
USP53-207ENST00000510852 HINT1P49773 126 aaPredicted RBP7.48□□□□□ -1.21
USP53-207ENST00000510852 ZNF57Q68EA5 555 aaPredicted RBP7.48□□□□□ -1.21
USP53-207ENST00000510852 CD177Q8N6Q3 437 aa7.48□□□□□ -1.21
USP53-207ENST00000510852 TMEM230Q96A57 120 aa7.48□□□□□ -1.21
USP53-207ENST00000510852 VPS13CQ709C8 3753 aa7.47□□□□□ -1.21
USP53-207ENST00000510852 DYSFO75923 2080 aa7.47□□□□□ -1.21
USP53-207ENST00000510852 WI2-2373I1.2A0A1W2PRP0 233 aa7.47□□□□□ -1.21
USP53-207ENST00000510852 IGHV4-31P0DP07 118 aa7.47□□□□□ -1.21
USP53-207ENST00000510852 SEC61A1P61619 476 aaKnown RBP7.47□□□□□ -1.21
USP53-207ENST00000510852 ATP5G2Q06055 141 aa7.47□□□□□ -1.21
USP53-207ENST00000510852 MRPL20Q9BYC9 149 aaKnown RBP7.47□□□□□ -1.21
USP53-207ENST00000510852 ANAPC10Q9UM13 185 aa7.47□□□□□ -1.21
USP53-207ENST00000510852 SPG11Q96JI7 2443 aa7.47□□□□□ -1.21
USP53-207ENST00000510852 PTPN13Q12923 2485 aa7.47□□□□□ -1.21
USP53-207ENST00000510852 GYPAP02724 150 aa7.47□□□□□ -1.21
USP53-207ENST00000510852 OSR1Q8TAX0 266 aaPredicted RBP7.47□□□□□ -1.21
USP53-207ENST00000510852 ZNF222Q9UK12 451 aa7.47□□□□□ -1.21
USP53-207ENST00000510852 CSMD2Q7Z408 3487 aa7.46□□□□□ -1.21
USP53-207ENST00000510852 TRGV11A0A075B6L2 103 aa7.46□□□□□ -1.22
USP53-207ENST00000510852 IGKV1D-13A0A0B4J2D9 117 aa7.46□□□□□ -1.22
USP53-207ENST00000510852 LOC100131303A0A0U1RQF7 123 aa7.46□□□□□ -1.22
USP53-207ENST00000510852 RBMY1BA6NDE4 496 aaKnown RBP7.46□□□□□ -1.22
USP53-207ENST00000510852 RBMY1EA6NEQ0 496 aaKnown RBP7.46□□□□□ -1.22
USP53-207ENST00000510852 NCR2O95944 276 aa7.46□□□□□ -1.22
USP53-207ENST00000510852 IGHV4-39P01824 125 aa7.46□□□□□ -1.22
USP53-207ENST00000510852 RBMY1DP0C7P1 496 aaKnown RBP7.46□□□□□ -1.22
USP53-207ENST00000510852 RBMY1A1P0DJD3 496 aaKnown RBP7.46□□□□□ -1.22
USP53-207ENST00000510852 IGKV1-13P0DP09 117 aa7.46□□□□□ -1.22
USP53-207ENST00000510852 LMO1P25800 156 aa7.46□□□□□ -1.22
USP53-207ENST00000510852 SCGB1D4Q6XE38 83 aa7.46□□□□□ -1.22
USP53-207ENST00000510852 BRK1Q8WUW1 75 aa7.46□□□□□ -1.22
USP53-207ENST00000510852 MAP6D1Q9H9H5 199 aa7.46□□□□□ -1.22
USP53-207ENST00000510852 GNB4Q9HAV0 340 aa7.46□□□□□ -1.22
USP53-207ENST00000510852 AK3Q9UIJ7 227 aa7.46□□□□□ -1.22
USP53-207ENST00000510852 TRBV20-1A0A075B6N2 111 aa7.46□□□□□ -1.22
USP53-207ENST00000510852 MCRIP1C9JLW8 97 aa7.46□□□□□ -1.22
USP53-207ENST00000510852 F8W735 103 aaPredicted RBP7.46□□□□□ -1.22
USP53-207ENST00000510852 SNCAP37840 140 aa7.46□□□□□ -1.22
USP53-207ENST00000510852 HMGN3Q15651 99 aa7.46□□□□□ -1.22
USP53-207ENST00000510852 RTL8BQ17RB0 113 aa7.46□□□□□ -1.22
USP53-207ENST00000510852 FAM222AQ5U5X8 452 aa7.46□□□□□ -1.22
USP53-207ENST00000510852 ATOH7Q8N100 152 aa7.46□□□□□ -1.22
USP53-207ENST00000510852 OR4B1Q8NGF8 309 aa7.46□□□□□ -1.22
USP53-207ENST00000510852 SMIM4Q8WVI0 70 aa7.46□□□□□ -1.22
USP53-207ENST00000510852 CCL13Q99616 98 aa7.46□□□□□ -1.22
USP53-207ENST00000510852 PLEKHA3Q9HB20 300 aa7.46□□□□□ -1.22
USP53-207ENST00000510852 C21orf62Q9NYP8 219 aa7.46□□□□□ -1.22
USP53-207ENST00000510852 TRAV8-6A0A0B4J262 113 aa7.45□□□□□ -1.22
USP53-207ENST00000510852 ZNF737O75373 536 aa7.45□□□□□ -1.22
USP53-207ENST00000510852 MT-ND6P03923 174 aa7.45□□□□□ -1.22
USP53-207ENST00000510852 DAD1P61803 113 aa7.45□□□□□ -1.22
USP53-207ENST00000510852 Q6ZN92 141 aa7.45□□□□□ -1.22
USP53-207ENST00000510852 TRAPPC6BQ86SZ2 158 aa7.45□□□□□ -1.22
USP53-207ENST00000510852 GAFA1Q96PS6 74 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms