RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 RBMY1FQ15415 496 aaKnown RBP6.86□□□□□ -1.31
HTT-208ENST00000510626 RPP25Q9BUL9 199 aaKnown RBP6.86□□□□□ -1.31
HTT-208ENST00000510626 C17orf100A8MU93 164 aa6.86□□□□□ -1.31
HTT-208ENST00000510626 PF4P02776 101 aa6.86□□□□□ -1.31
HTT-208ENST00000510626 PRDM6Q9NQX0 595 aa6.86□□□□□ -1.31
HTT-208ENST00000510626 SRRM5B3KS81 715 aa6.85□□□□□ -1.31
HTT-208ENST00000510626 PRO1854Q9UHT4 67 aa6.85□□□□□ -1.31
HTT-208ENST00000510626 LIME1Q9H400 295 aa6.85□□□□□ -1.31
HTT-208ENST00000510626 HIST1H4AP62805 103 aaKnown RBP6.85□□□□□ -1.31
HTT-208ENST00000510626 TRGV2A0A075B6R0 118 aa6.85□□□□□ -1.31
HTT-208ENST00000510626 C2orf16Q68DN1 1984 aa6.85□□□□□ -1.31
HTT-208ENST00000510626 IGKV3-7A0A075B6H7 116 aa6.85□□□□□ -1.31
HTT-208ENST00000510626 RNF152Q8N8N0 203 aa6.85□□□□□ -1.31
HTT-208ENST00000510626 A0A1W2PRD5 423 aa6.85□□□□□ -1.31
HTT-208ENST00000510626 A0A1W2PRF3 423 aa6.85□□□□□ -1.31
HTT-208ENST00000510626 A0A1W2PRM7 423 aa6.85□□□□□ -1.31
HTT-208ENST00000510626 LTBRP36941 435 aa6.85□□□□□ -1.31
HTT-208ENST00000510626 PYYP10082 97 aa6.85□□□□□ -1.31
HTT-208ENST00000510626 CLEC19AQ6UXS0 136 aa6.85□□□□□ -1.31
HTT-208ENST00000510626 HAPLN4Q86UW8 402 aa6.85□□□□□ -1.31
HTT-208ENST00000510626 PNRC2Q9NPJ4 139 aaKnown RBP6.85□□□□□ -1.31
HTT-208ENST00000510626 IGKV1-5P01602 117 aa6.85□□□□□ -1.31
HTT-208ENST00000510626 FOXL2NBQ6ZUU3 175 aa6.85□□□□□ -1.31
HTT-208ENST00000510626 VDAC2P45880 294 aaPredicted RBP6.85□□□□□ -1.31
HTT-208ENST00000510626 STPG4Q8N801 248 aa6.85□□□□□ -1.31
HTT-208ENST00000510626 G3V4G9 280 aa6.85□□□□□ -1.31
HTT-208ENST00000510626 NPYP01303 97 aa6.85□□□□□ -1.31
HTT-208ENST00000510626 ATP5J2P56134 94 aa6.85□□□□□ -1.31
HTT-208ENST00000510626 V9GYY9 64 aa6.85□□□□□ -1.31
HTT-208ENST00000510626 NPSP0C0P6 89 aa6.84□□□□□ -1.31
HTT-208ENST00000510626 F8VRH5 84 aa6.84□□□□□ -1.31
HTT-208ENST00000510626 VSIRQ9H7M9 311 aa6.84□□□□□ -1.31
HTT-208ENST00000510626 ZNF319Q9P2F9 582 aa6.84□□□□□ -1.31
HTT-208ENST00000510626 IGKV1D-8A0A087WSZ0 117 aa6.84□□□□□ -1.31
HTT-208ENST00000510626 PAX4O43316 350 aa6.84□□□□□ -1.31
HTT-208ENST00000510626 TMEM158Q8WZ71 300 aa6.84□□□□□ -1.31
HTT-208ENST00000510626 MUC6Q6W4X9 2439 aa6.84□□□□□ -1.31
HTT-208ENST00000510626 H0YJW9 148 aa6.84□□□□□ -1.31
HTT-208ENST00000510626 GATA4P43694 442 aa6.84□□□□□ -1.31
HTT-208ENST00000510626 ETDBQ3ZM63 59 aa6.84□□□□□ -1.31
HTT-208ENST00000510626 A0A1W2PR77 199 aa6.84□□□□□ -1.31
HTT-208ENST00000510626 C5orf47Q569G3 176 aa6.84□□□□□ -1.31
HTT-208ENST00000510626 SLC25A45Q8N413 288 aa6.84□□□□□ -1.31
HTT-208ENST00000510626 TSSC4Q9Y5U2 329 aaPredicted RBP6.84□□□□□ -1.31
HTT-208ENST00000510626 LYRM9A8MSI8 78 aa6.84□□□□□ -1.31
HTT-208ENST00000510626 TNS1Q9HBL0 1735 aaKnown RBP6.84□□□□□ -1.31
HTT-208ENST00000510626 H3BT86 120 aa6.84□□□□□ -1.31
HTT-208ENST00000510626 MRPS36P82909 103 aaKnown RBP6.84□□□□□ -1.31
HTT-208ENST00000510626 PPP1R32Q7Z5V6 425 aa6.84□□□□□ -1.32
HTT-208ENST00000510626 ZNF784Q8NCA9 323 aaPredicted RBP6.84□□□□□ -1.32
HTT-208ENST00000510626 PCNX3Q9H6A9 2034 aa6.84□□□□□ -1.32
HTT-208ENST00000510626 ZNF493Q6ZR52 646 aa6.84□□□□□ -1.32
HTT-208ENST00000510626 NABP1Q96AH0 204 aa6.84□□□□□ -1.32
HTT-208ENST00000510626 PMS2P5A8MQ11 134 aa6.83□□□□□ -1.32
HTT-208ENST00000510626 WDR87Q6ZQQ6 2873 aa6.83□□□□□ -1.32
HTT-208ENST00000510626 IGKV1D-43A0A0B4J1Z2 117 aa6.83□□□□□ -1.32
HTT-208ENST00000510626 Q6P435 159 aa6.83□□□□□ -1.32
HTT-208ENST00000510626 HS3ST6Q96QI5 342 aa6.83□□□□□ -1.32
HTT-208ENST00000510626 IGHV1-2P23083 117 aa6.83□□□□□ -1.32
HTT-208ENST00000510626 VWC2Q2TAL6 325 aa6.83□□□□□ -1.32
HTT-208ENST00000510626 RHOHQ15669 191 aa6.83□□□□□ -1.32
HTT-208ENST00000510626 VSIG2Q96IQ7 327 aa6.83□□□□□ -1.32
HTT-208ENST00000510626 C8orf31Q8N9H6 132 aa6.83□□□□□ -1.32
HTT-208ENST00000510626 MRPL53Q96EL3 112 aaKnown RBP6.83□□□□□ -1.32
HTT-208ENST00000510626 CCL19Q99731 98 aa6.83□□□□□ -1.32
HTT-208ENST00000510626 V9GYV3 84 aa6.83□□□□□ -1.32
HTT-208ENST00000510626 TLN2Q9Y4G6 2542 aa6.83□□□□□ -1.32
HTT-208ENST00000510626 LILRA1O75019 489 aa6.83□□□□□ -1.32
HTT-208ENST00000510626 GATA2P23769 480 aaPredicted RBP6.83□□□□□ -1.32
HTT-208ENST00000510626 LEAP2Q969E1 77 aa6.83□□□□□ -1.32
HTT-208ENST00000510626 IGHV1-69DA0A0B4J2H0 117 aa6.83□□□□□ -1.32
HTT-208ENST00000510626 INSP01308 110 aa6.83□□□□□ -1.32
HTT-208ENST00000510626 CDKN1AP38936 164 aa6.83□□□□□ -1.32
HTT-208ENST00000510626 DEFB124Q8NES8 71 aa6.83□□□□□ -1.32
HTT-208ENST00000510626 ATG2AQ2TAZ0 1938 aa6.82□□□□□ -1.32
HTT-208ENST00000510626 C5orf64Q2M2E5 130 aa6.82□□□□□ -1.32
HTT-208ENST00000510626 CELA2AP08217 269 aa6.82□□□□□ -1.32
HTT-208ENST00000510626 NPIPB5A8MRT5 1133 aa6.82□□□□□ -1.32
HTT-208ENST00000510626 ETV2O00321 342 aaPredicted RBP6.82□□□□□ -1.32
HTT-208ENST00000510626 TGFAP01135 160 aa6.82□□□□□ -1.32
HTT-208ENST00000510626 hADV29S1A0JD25 119 aa6.82□□□□□ -1.32
HTT-208ENST00000510626 HERV-K104P63124 156 aa6.82□□□□□ -1.32
HTT-208ENST00000510626 BSPH1Q075Z2 132 aa6.82□□□□□ -1.32
HTT-208ENST00000510626 FOXF2Q12947 444 aa6.82□□□□□ -1.32
HTT-208ENST00000510626 NTF4P34130 210 aa6.82□□□□□ -1.32
HTT-208ENST00000510626 FLVCR1-AS1Q8TAF5 88 aa6.82□□□□□ -1.32
HTT-208ENST00000510626 IGHV3-48P01763 117 aa6.81□□□□□ -1.32
HTT-208ENST00000510626 DSCR8Q96T75 97 aa6.81□□□□□ -1.32
HTT-208ENST00000510626 F8P00451 2351 aa6.81□□□□□ -1.32
HTT-208ENST00000510626 CRYBA4P53673 196 aa6.81□□□□□ -1.32
HTT-208ENST00000510626 C15orf32Q32M92 178 aa6.81□□□□□ -1.32
HTT-208ENST00000510626 NTN3O00634 580 aaPredicted RBP6.81□□□□□ -1.32
HTT-208ENST00000510626 RNASE2P10153 161 aaKnown RBP6.81□□□□□ -1.32
HTT-208ENST00000510626 STHQ8IWL8 128 aa6.81□□□□□ -1.32
HTT-208ENST00000510626 SPEM2Q0P670 501 aa6.81□□□□□ -1.32
HTT-208ENST00000510626 CARD19Q96LW7 228 aa6.81□□□□□ -1.32
HTT-208ENST00000510626 COX6B1P14854 86 aa6.81□□□□□ -1.32
HTT-208ENST00000510626 IGKV1-12A0A0C4DH73 117 aa6.81□□□□□ -1.32
HTT-208ENST00000510626 IGKV3OR2-268A0A0C4DH90 116 aa6.81□□□□□ -1.32
HTT-208ENST00000510626 IGKV1D-12P01611 117 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms