RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 ZNF486Q96H40 463 aaPredicted RBP6.82□□□□□ -1.32
SNF8-207ENST00000509995 KIF25-AS1Q9Y6Z4 181 aa6.82□□□□□ -1.32
SNF8-207ENST00000509995 KLLNB2CW77 178 aa6.81□□□□□ -1.32
SNF8-207ENST00000509995 GGTLC3B5MD39 225 aa6.81□□□□□ -1.32
SNF8-207ENST00000509995 PHOX2AO14813 284 aa6.81□□□□□ -1.32
SNF8-207ENST00000509995 RGS10O43665 173 aa6.81□□□□□ -1.32
SNF8-207ENST00000509995 BTN1A1Q13410 526 aa6.81□□□□□ -1.32
SNF8-207ENST00000509995 LCN15Q6UWW0 184 aa6.81□□□□□ -1.32
SNF8-207ENST00000509995 TMEM182Q6ZP80 229 aaPredicted RBP6.81□□□□□ -1.32
SNF8-207ENST00000509995 SLC50A1Q9BRV3 221 aa6.81□□□□□ -1.32
SNF8-207ENST00000509995 S100A14Q9HCY8 104 aa6.81□□□□□ -1.32
SNF8-207ENST00000509995 SCN3BQ9NY72 215 aa6.81□□□□□ -1.32
SNF8-207ENST00000509995 SSR3Q9UNL2 185 aa6.81□□□□□ -1.32
SNF8-207ENST00000509995 PMS2P5A8MQ11 134 aa6.8□□□□□ -1.32
SNF8-207ENST00000509995 MPDU1O75352 247 aa6.8□□□□□ -1.32
SNF8-207ENST00000509995 PFN1P07737 140 aaKnown RBP6.8□□□□□ -1.32
SNF8-207ENST00000509995 RAP2BP61225 183 aa6.8□□□□□ -1.32
SNF8-207ENST00000509995 CIRBPQ14011 172 aaKnown RBP6.8□□□□□ -1.32
SNF8-207ENST00000509995 OR1S1Q8NH92 325 aa6.8□□□□□ -1.32
SNF8-207ENST00000509995 DTD1Q8TEA8 209 aa6.8□□□□□ -1.32
SNF8-207ENST00000509995 DNAJC30Q96LL9 226 aa6.8□□□□□ -1.32
SNF8-207ENST00000509995 ARPC5LQ9BPX5 153 aa6.8□□□□□ -1.32
SNF8-207ENST00000509995 HIGD1AQ9Y241 93 aa6.8□□□□□ -1.32
SNF8-207ENST00000509995 TRAV4A0A0B4J268 109 aa6.79□□□□□ -1.32
SNF8-207ENST00000509995 RGS13O14921 159 aa6.79□□□□□ -1.32
SNF8-207ENST00000509995 MRPS12O15235 138 aaKnown RBP6.79□□□□□ -1.32
SNF8-207ENST00000509995 PRR3P79522 188 aaKnown RBP6.79□□□□□ -1.32
SNF8-207ENST00000509995 PACRGLQ8N7B6 248 aa6.79□□□□□ -1.32
SNF8-207ENST00000509995 C9orf163Q8N9P6 203 aa6.79□□□□□ -1.32
SNF8-207ENST00000509995 LHFPL5Q8TAF8 219 aa6.79□□□□□ -1.32
SNF8-207ENST00000509995 RASL10AQ92737 203 aa6.79□□□□□ -1.32
SNF8-207ENST00000509995 ZC2HC1AQ96GY0 325 aa6.79□□□□□ -1.32
SNF8-207ENST00000509995 CACFD1Q9UGQ2 172 aa6.79□□□□□ -1.32
SNF8-207ENST00000509995 IGHV1OR15-1A0A075B7D0 117 aa6.78□□□□□ -1.32
SNF8-207ENST00000509995 FABP12A6NFH5 140 aa6.78□□□□□ -1.32
SNF8-207ENST00000509995 SLC17A3O00476 420 aa6.78□□□□□ -1.32
SNF8-207ENST00000509995 PITX3O75364 302 aa6.78□□□□□ -1.32
SNF8-207ENST00000509995 ATP5HO75947 161 aa6.78□□□□□ -1.32
SNF8-207ENST00000509995 CDS2O95674 445 aa6.78□□□□□ -1.32
SNF8-207ENST00000509995 ATP5IP56385 69 aaPredicted RBP6.78□□□□□ -1.32
SNF8-207ENST00000509995 ACOT7LQ6ZUV0 252 aa6.78□□□□□ -1.32
SNF8-207ENST00000509995 TMEM222Q9H0R3 208 aa6.78□□□□□ -1.32
SNF8-207ENST00000509995 GTSF1LQ9H1H1 148 aa6.78□□□□□ -1.32
SNF8-207ENST00000509995 DUSP21Q9H596 190 aa6.78□□□□□ -1.32
SNF8-207ENST00000509995 C8orf4Q9NR00 106 aa6.78□□□□□ -1.32
SNF8-207ENST00000509995 COPZ2Q9P299 210 aa6.78□□□□□ -1.32
SNF8-207ENST00000509995 VAX2Q9UIW0 290 aa6.78□□□□□ -1.32
SNF8-207ENST00000509995 B3GALNT1O75752 331 aa6.77□□□□□ -1.33
SNF8-207ENST00000509995 SNRPCP09234 159 aaKnown RBP6.77□□□□□ -1.33
SNF8-207ENST00000509995 GATA1P15976 413 aaPredicted RBP6.77□□□□□ -1.33
SNF8-207ENST00000509995 RNASE4P34096 147 aaKnown RBP6.77□□□□□ -1.33
SNF8-207ENST00000509995 SDIM1Q6ZPB5 146 aa6.77□□□□□ -1.33
SNF8-207ENST00000509995 CCDC71LQ8N9Z2 235 aa6.77□□□□□ -1.33
SNF8-207ENST00000509995 C7orf33Q8WU49 177 aa6.77□□□□□ -1.33
SNF8-207ENST00000509995 RBKSQ9H477 322 aa6.77□□□□□ -1.33
SNF8-207ENST00000509995 TXNL4BQ9NX01 149 aaKnown RBP6.77□□□□□ -1.33
SNF8-207ENST00000509995 HSPB7Q9UBY9 170 aa6.77□□□□□ -1.33
SNF8-207ENST00000509995 A0A087WYN8 130 aa6.76□□□□□ -1.33
SNF8-207ENST00000509995 HYPMO75409 117 aa6.76□□□□□ -1.33
SNF8-207ENST00000509995 OR4E1P0C645 316 aa6.76□□□□□ -1.33
SNF8-207ENST00000509995 SULT1A3P0DMM9 295 aa6.76□□□□□ -1.33
SNF8-207ENST00000509995 SULT1A4P0DMN0 295 aa6.76□□□□□ -1.33
SNF8-207ENST00000509995 OPCMLQ14982 345 aa6.76□□□□□ -1.33
SNF8-207ENST00000509995 VWC2Q2TAL6 325 aa6.76□□□□□ -1.33
SNF8-207ENST00000509995 DGAT2L7PQ6IED9 249 aa6.76□□□□□ -1.33
SNF8-207ENST00000509995 SPINK6Q6UWN8 80 aa6.76□□□□□ -1.33
SNF8-207ENST00000509995 PRSS48Q7RTY5 328 aa6.76□□□□□ -1.33
SNF8-207ENST00000509995 SELENOHQ8IZQ5 122 aaKnown RBP6.76□□□□□ -1.33
SNF8-207ENST00000509995 OR4C5Q8NGB2 326 aa6.76□□□□□ -1.33
SNF8-207ENST00000509995 GLYATL2Q8WU03 294 aa6.76□□□□□ -1.33
SNF8-207ENST00000509995 FAM19A4Q96LR4 140 aa6.76□□□□□ -1.33
SNF8-207ENST00000509995 TPRKBQ9Y3C4 175 aa6.76□□□□□ -1.33
SNF8-207ENST00000509995 IGHV3-16A0A0C4DH30 117 aa6.75□□□□□ -1.33
SNF8-207ENST00000509995 H3BTX0 84 aa6.75□□□□□ -1.33
SNF8-207ENST00000509995 OR5G3P0C626 314 aa6.75□□□□□ -1.33
SNF8-207ENST00000509995 ANXA7P20073 488 aaKnown RBP6.75□□□□□ -1.33
SNF8-207ENST00000509995 PRSS3P35030 304 aa6.75□□□□□ -1.33
SNF8-207ENST00000509995 RAB11AP62491 216 aa6.75□□□□□ -1.33
SNF8-207ENST00000509995 ATRAIDQ6UW56 229 aa6.75□□□□□ -1.33
SNF8-207ENST00000509995 Q6ZQT7 251 aa6.75□□□□□ -1.33
SNF8-207ENST00000509995 LHFPL1Q86WI0 220 aa6.75□□□□□ -1.33
SNF8-207ENST00000509995 RNF185Q96GF1 192 aa6.75□□□□□ -1.33
SNF8-207ENST00000509995 C2orf50Q96LR7 162 aa6.75□□□□□ -1.33
SNF8-207ENST00000509995 PXMP4Q9Y6I8 212 aa6.75□□□□□ -1.33
SNF8-207ENST00000509995 KRTAP9-7A8MTY7 169 aa6.74□□□□□ -1.33
SNF8-207ENST00000509995 GPX1P07203 203 aa6.74□□□□□ -1.33
SNF8-207ENST00000509995 LINC00869P0C866 280 aa6.74□□□□□ -1.33
SNF8-207ENST00000509995 SDC2P34741 201 aa6.74□□□□□ -1.33
SNF8-207ENST00000509995 PLP1P60201 277 aa6.74□□□□□ -1.33
SNF8-207ENST00000509995 AKR1C1Q04828 323 aa6.74□□□□□ -1.33
SNF8-207ENST00000509995 MXD1Q05195 221 aa6.74□□□□□ -1.33
SNF8-207ENST00000509995 ERCC8Q13216 396 aa6.74□□□□□ -1.33
SNF8-207ENST00000509995 PRR9Q5T870 116 aa6.74□□□□□ -1.33
SNF8-207ENST00000509995 TMEM268Q5VZI3 342 aa6.74□□□□□ -1.33
SNF8-207ENST00000509995 DPPA3Q6W0C5 159 aa6.74□□□□□ -1.33
SNF8-207ENST00000509995 SLC25A29Q8N8R3 303 aa6.74□□□□□ -1.33
SNF8-207ENST00000509995 OR4D10Q8NGI6 311 aa6.74□□□□□ -1.33
SNF8-207ENST00000509995 GPX8Q8TED1 209 aa6.74□□□□□ -1.33
SNF8-207ENST00000509995 S100A16Q96FQ6 103 aaKnown RBP6.74□□□□□ -1.33
SNF8-207ENST00000509995 OR51M1Q9H341 326 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms