RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 ST20Q9HBF5 79 aa13.98□□□□□ -0.17
CCHCR1-228ENST00000509552 AP5S1Q9NUS5 200 aa13.98□□□□□ -0.17
CCHCR1-228ENST00000509552 HRNRQ86YZ3 2850 aaPredicted RBP13.98□□□□□ -0.17
CCHCR1-228ENST00000509552 TMSB15BA0A087X1C1 80 aa13.98□□□□□ -0.17
CCHCR1-228ENST00000509552 FA2HQ7L5A8 372 aa13.98□□□□□ -0.17
CCHCR1-228ENST00000509552 COX8CQ7Z4L0 72 aa13.98□□□□□ -0.17
CCHCR1-228ENST00000509552 PRSS3P2Q8NHM4 247 aa13.98□□□□□ -0.17
CCHCR1-228ENST00000509552 FAM110DQ8TAY7 271 aaPredicted RBP13.98□□□□□ -0.17
CCHCR1-228ENST00000509552 PRR25Q96S07 402 aa13.98□□□□□ -0.17
CCHCR1-228ENST00000509552 UBTD1Q9HAC8 227 aa13.98□□□□□ -0.17
CCHCR1-228ENST00000509552 UNQ5815/PRO19632Q6UWF5 114 aa13.97□□□□□ -0.17
CCHCR1-228ENST00000509552 STPG4Q8N801 248 aa13.97□□□□□ -0.17
CCHCR1-228ENST00000509552 GOLT1BQ9Y3E0 138 aa13.97□□□□□ -0.17
CCHCR1-228ENST00000509552 A0A1W2PPR1 153 aa13.97□□□□□ -0.17
CCHCR1-228ENST00000509552 HSBP1L1C9JCN9 74 aa13.97□□□□□ -0.17
CCHCR1-228ENST00000509552 BMI1P35226 326 aa13.96□□□□□ -0.17
CCHCR1-228ENST00000509552 EFNA4P52798 201 aa13.96□□□□□ -0.17
CCHCR1-228ENST00000509552 RPS20P60866 119 aaKnown RBP13.96□□□□□ -0.17
CCHCR1-228ENST00000509552 ECSCRQ19T08 205 aa13.96□□□□□ -0.17
CCHCR1-228ENST00000509552 C15orf32Q32M92 178 aa13.96□□□□□ -0.17
CCHCR1-228ENST00000509552 SMAD5-AS1Q9Y6J3 95 aa13.96□□□□□ -0.17
CCHCR1-228ENST00000509552 GPR183P32249 361 aa13.96□□□□□ -0.18
CCHCR1-228ENST00000509552 HINT1P49773 126 aaPredicted RBP13.96□□□□□ -0.18
CCHCR1-228ENST00000509552 TIMM8BQ9Y5J9 83 aaPredicted RBP13.96□□□□□ -0.18
CCHCR1-228ENST00000509552 RAB9AP51151 201 aa13.95□□□□□ -0.18
CCHCR1-228ENST00000509552 ZNF502Q8TBZ5 544 aa13.95□□□□□ -0.18
CCHCR1-228ENST00000509552 ATRXP46100 2492 aa13.95□□□□□ -0.18
CCHCR1-228ENST00000509552 IGHV3-35A0A0C4DH35 117 aa13.95□□□□□ -0.18
CCHCR1-228ENST00000509552 OR10AG1Q8NH19 301 aa13.95□□□□□ -0.18
CCHCR1-228ENST00000509552 SAA4P35542 130 aa13.94□□□□□ -0.18
CCHCR1-228ENST00000509552 RHOGP84095 191 aa13.94□□□□□ -0.18
CCHCR1-228ENST00000509552 FAM104BQ5XKR9 115 aa13.94□□□□□ -0.18
CCHCR1-228ENST00000509552 VGLL1Q99990 258 aa13.94□□□□□ -0.18
CCHCR1-228ENST00000509552 WNK2Q9Y3S1 2297 aa13.93□□□□□ -0.18
CCHCR1-228ENST00000509552 IGHV3OR16-8A0A075B7F1 116 aa13.93□□□□□ -0.18
CCHCR1-228ENST00000509552 hDV102S1A0JD36 115 aa13.93□□□□□ -0.18
CCHCR1-228ENST00000509552 TMEM213A2RRL7 107 aa13.93□□□□□ -0.18
CCHCR1-228ENST00000509552 H0Y8G0 127 aa13.93□□□□□ -0.18
CCHCR1-228ENST00000509552 ATP6V0E1O15342 81 aa13.93□□□□□ -0.18
CCHCR1-228ENST00000509552 GOSR1O95249 250 aa13.93□□□□□ -0.18
CCHCR1-228ENST00000509552 Q8TAT8 98 aa13.93□□□□□ -0.18
CCHCR1-228ENST00000509552 D6R8Y8 96 aa13.93□□□□□ -0.18
CCHCR1-228ENST00000509552 CLEC3BP05452 202 aa13.93□□□□□ -0.18
CCHCR1-228ENST00000509552 IGFL4Q6B9Z1 124 aa13.93□□□□□ -0.18
CCHCR1-228ENST00000509552 NPSP0C0P6 89 aa13.92□□□□□ -0.18
CCHCR1-228ENST00000509552 ORMDL3Q8N138 153 aa13.92□□□□□ -0.18
CCHCR1-228ENST00000509552 AJUBAQ96IF1 538 aa13.92□□□□□ -0.18
CCHCR1-228ENST00000509552 PRELID3AQ96N28 172 aa13.92□□□□□ -0.18
CCHCR1-228ENST00000509552 COL25A1Q9BXS0 654 aaPredicted RBP13.92□□□□□ -0.18
CCHCR1-228ENST00000509552 IGHG4P01861 327 aa13.92□□□□□ -0.18
CCHCR1-228ENST00000509552 HLA-DMBP28068 263 aa13.92□□□□□ -0.18
CCHCR1-228ENST00000509552 KLK9Q2XQG4 91 aa13.92□□□□□ -0.18
CCHCR1-228ENST00000509552 AMN1Q8IY45 258 aa13.92□□□□□ -0.18
CCHCR1-228ENST00000509552 FER1L6-AS1Q8NA97 138 aa13.92□□□□□ -0.18
CCHCR1-228ENST00000509552 KLK9Q9UKQ9 250 aa13.92□□□□□ -0.18
CCHCR1-228ENST00000509552 U3KQK5 164 aa13.92□□□□□ -0.18
CCHCR1-228ENST00000509552 IFI27P40305 119 aaPredicted RBP13.91□□□□□ -0.18
CCHCR1-228ENST00000509552 ZNF747Q9BV97 191 aa13.91□□□□□ -0.18
CCHCR1-228ENST00000509552 BPESC1Q9GZL8 116 aa13.91□□□□□ -0.18
CCHCR1-228ENST00000509552 A0A087X0K7 114 aa13.91□□□□□ -0.18
CCHCR1-228ENST00000509552 ZNF80P51504 273 aaPredicted RBP13.91□□□□□ -0.18
CCHCR1-228ENST00000509552 TWIST1Q15672 202 aa13.91□□□□□ -0.18
CCHCR1-228ENST00000509552 SLC25A34Q6PIV7 304 aa13.91□□□□□ -0.18
CCHCR1-228ENST00000509552 ZFAND3Q9H8U3 227 aa13.91□□□□□ -0.18
CCHCR1-228ENST00000509552 COL6A6A6NMZ7 2263 aa13.91□□□□□ -0.18
CCHCR1-228ENST00000509552 LOC389332A0A1B0GUA5 103 aa13.9□□□□□ -0.18
CCHCR1-228ENST00000509552 BUB3O43684 328 aa13.9□□□□□ -0.18
CCHCR1-228ENST00000509552 LMO4P61968 165 aa13.9□□□□□ -0.18
CCHCR1-228ENST00000509552 SRSF2Q01130 221 aaKnown RBP13.9□□□□□ -0.18
CCHCR1-228ENST00000509552 LINC01545Q5VT33 79 aa13.9□□□□□ -0.18
CCHCR1-228ENST00000509552 MS4A6AQ9H2W1 248 aa13.9□□□□□ -0.18
CCHCR1-228ENST00000509552 NHLH1Q02575 133 aa13.9□□□□□ -0.18
CCHCR1-228ENST00000509552 EEF1AKMT3Q96AZ1 226 aa13.9□□□□□ -0.18
CCHCR1-228ENST00000509552 SIGLEC8Q9NYZ4 499 aa13.9□□□□□ -0.18
CCHCR1-228ENST00000509552 SPTBN1Q01082 2364 aaKnown RBP13.89□□□□□ -0.19
CCHCR1-228ENST00000509552 MUC21A0A0G2JKD1 596 aa13.89□□□□□ -0.19
CCHCR1-228ENST00000509552 MUC21A0A140T8X8 626 aa13.89□□□□□ -0.19
CCHCR1-228ENST00000509552 FABP5P3A8MUU1 101 aa13.89□□□□□ -0.19
CCHCR1-228ENST00000509552 NPFFO15130 113 aa13.89□□□□□ -0.19
CCHCR1-228ENST00000509552 ORM1P02763 201 aa13.89□□□□□ -0.19
CCHCR1-228ENST00000509552 LY6DQ14210 128 aa13.89□□□□□ -0.19
CCHCR1-228ENST00000509552 MRPL51Q4U2R6 128 aaKnown RBP13.89□□□□□ -0.19
CCHCR1-228ENST00000509552 MUC21Q5SSG8 566 aa13.89□□□□□ -0.19
CCHCR1-228ENST00000509552 CLEC19AQ6UXS0 136 aa13.89□□□□□ -0.19
CCHCR1-228ENST00000509552 SLC50A1Q9BRV3 221 aa13.89□□□□□ -0.19
CCHCR1-228ENST00000509552 MCRIP2Q9BUT9 160 aaKnown RBP13.89□□□□□ -0.19
CCHCR1-228ENST00000509552 CENPVL3A0A0U1RRI6 287 aa13.89□□□□□ -0.19
CCHCR1-228ENST00000509552 FOSL1P15407 271 aa13.89□□□□□ -0.19
CCHCR1-228ENST00000509552 IGLC6P0CF74 106 aa13.88□□□□□ -0.19
CCHCR1-228ENST00000509552 SFTPCP11686 197 aa13.88□□□□□ -0.19
CCHCR1-228ENST00000509552 CKS2P33552 79 aa13.88□□□□□ -0.19
CCHCR1-228ENST00000509552 RBAKDNA6NC62 111 aa13.87□□□□□ -0.19
CCHCR1-228ENST00000509552 G3V318 75 aa13.87□□□□□ -0.19
CCHCR1-228ENST00000509552 ORAOV1Q8WV07 137 aa13.87□□□□□ -0.19
CCHCR1-228ENST00000509552 CCDC140Q96MF4 163 aa13.87□□□□□ -0.19
CCHCR1-228ENST00000509552 PMCHL2Q9BQD1 86 aa13.87□□□□□ -0.19
CCHCR1-228ENST00000509552 SCRT2Q9NQ03 307 aa13.87□□□□□ -0.19
CCHCR1-228ENST00000509552 TRBV7-1A0A0A6YYK4 115 aa13.87□□□□□ -0.19
CCHCR1-228ENST00000509552 ERCC8Q13216 396 aa13.87□□□□□ -0.19
CCHCR1-228ENST00000509552 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms