RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 SAV1Q9H4B6 383 aaPredicted RBP10.99□□□□□ -0.65
RNF4-213ENST00000509388 OTORQ9NRC9 128 aa10.99□□□□□ -0.65
RNF4-213ENST00000509388 ZNF705FA8MVS1 300 aaPredicted RBP10.98□□□□□ -0.65
RNF4-213ENST00000509388 F6UB75 175 aa10.98□□□□□ -0.65
RNF4-213ENST00000509388 DUSP14O95147 198 aaKnown RBP10.98□□□□□ -0.65
RNF4-213ENST00000509388 IFNA7P01567 189 aa10.98□□□□□ -0.65
RNF4-213ENST00000509388 FRMD6-AS1P0C7T7 363 aa10.98□□□□□ -0.65
RNF4-213ENST00000509388 BLOC1S1P78537 153 aa10.98□□□□□ -0.65
RNF4-213ENST00000509388 OR4B1Q8NGF8 309 aa10.98□□□□□ -0.65
RNF4-213ENST00000509388 OR10J6PQ8NGY7 276 aa10.98□□□□□ -0.65
RNF4-213ENST00000509388 SUN5Q8TC36 379 aa10.98□□□□□ -0.65
RNF4-213ENST00000509388 CITED4Q96RK1 184 aa10.98□□□□□ -0.65
RNF4-213ENST00000509388 PPP1R14DQ9NXH3 145 aa10.98□□□□□ -0.65
RNF4-213ENST00000509388 M0R3E3 92 aa10.97□□□□□ -0.65
RNF4-213ENST00000509388 IGKV3-20P01619 116 aa10.97□□□□□ -0.65
RNF4-213ENST00000509388 HLA-DRB4P13762 266 aa10.97□□□□□ -0.65
RNF4-213ENST00000509388 PPT1P50897 306 aa10.97□□□□□ -0.65
RNF4-213ENST00000509388 APOC4P55056 127 aa10.97□□□□□ -0.65
RNF4-213ENST00000509388 DEFB1P60022 68 aa10.97□□□□□ -0.65
RNF4-213ENST00000509388 UBE2G2P60604 165 aa10.97□□□□□ -0.65
RNF4-213ENST00000509388 HIST1H1AQ02539 215 aaPredicted RBP10.97□□□□□ -0.65
RNF4-213ENST00000509388 TEX261Q6UWH6 196 aa10.97□□□□□ -0.65
RNF4-213ENST00000509388 OR8A1Q8NGG7 326 aa10.97□□□□□ -0.65
RNF4-213ENST00000509388 HLA-DRB4X5D2U9 266 aa10.97□□□□□ -0.65
RNF4-213ENST00000509388 NBEAL1Q6ZS30 2694 aa10.97□□□□□ -0.65
RNF4-213ENST00000509388 A0A0J9YX75 114 aa10.96□□□□□ -0.65
RNF4-213ENST00000509388 A0A1W2PRE2 83 aa10.96□□□□□ -0.65
RNF4-213ENST00000509388 RBMY1BA6NDE4 496 aaKnown RBP10.96□□□□□ -0.65
RNF4-213ENST00000509388 RBMY1EA6NEQ0 496 aaKnown RBP10.96□□□□□ -0.65
RNF4-213ENST00000509388 H3BMM0 161 aa10.96□□□□□ -0.65
RNF4-213ENST00000509388 RBMY1DP0C7P1 496 aaKnown RBP10.96□□□□□ -0.65
RNF4-213ENST00000509388 NUTF2P61970 127 aaKnown RBP10.96□□□□□ -0.65
RNF4-213ENST00000509388 GDF5OSQ5U4N7 250 aa10.96□□□□□ -0.65
RNF4-213ENST00000509388 NKX6-2Q9C056 277 aaPredicted RBP10.96□□□□□ -0.65
RNF4-213ENST00000509388 RPH3ALQ9UNE2 315 aa10.96□□□□□ -0.65
RNF4-213ENST00000509388 TRAV1-1A0A0B4J248 108 aa10.95□□□□□ -0.66
RNF4-213ENST00000509388 PRAC2D3DTV9 90 aa10.95□□□□□ -0.66
RNF4-213ENST00000509388 SLC25A5P05141 298 aaKnown RBP10.95□□□□□ -0.66
RNF4-213ENST00000509388 ZNF705DP0CH99 300 aaPredicted RBP10.95□□□□□ -0.66
RNF4-213ENST00000509388 ZNF705BP0CI00 300 aaPredicted RBP10.95□□□□□ -0.66
RNF4-213ENST00000509388 PRB4P10163 310 aaPredicted RBP10.95□□□□□ -0.66
RNF4-213ENST00000509388 CNN1P51911 297 aaKnown RBP10.95□□□□□ -0.66
RNF4-213ENST00000509388 SUMO1P63165 101 aaKnown RBP10.95□□□□□ -0.66
RNF4-213ENST00000509388 CST9LP1Q5W188 147 aa10.95□□□□□ -0.66
RNF4-213ENST00000509388 TRPT1Q86TN4 253 aaKnown RBP10.95□□□□□ -0.66
RNF4-213ENST00000509388 ZNF680Q8NEM1 530 aa10.95□□□□□ -0.66
RNF4-213ENST00000509388 CSTL1Q9H114 145 aa10.95□□□□□ -0.66
RNF4-213ENST00000509388 KIR2DL5BA0A0G2JN68 375 aa10.94□□□□□ -0.66
RNF4-213ENST00000509388 KIR2DL5BA0A0G2JPC4 375 aa10.94□□□□□ -0.66
RNF4-213ENST00000509388 IFNA1P01562 189 aa10.94□□□□□ -0.66
RNF4-213ENST00000509388 MORN3Q6PF18 240 aaPredicted RBP10.94□□□□□ -0.66
RNF4-213ENST00000509388 KIR2DL5AQ8N109 375 aa10.94□□□□□ -0.66
RNF4-213ENST00000509388 KIR2DL5BQ8NHK3 375 aa10.94□□□□□ -0.66
RNF4-213ENST00000509388 GNG13Q9P2W3 67 aa10.94□□□□□ -0.66
RNF4-213ENST00000509388 FAM74A7A6NL05 159 aa10.93□□□□□ -0.66
RNF4-213ENST00000509388 K7EQM0 130 aa10.93□□□□□ -0.66
RNF4-213ENST00000509388 PAGE4O60829 102 aa10.93□□□□□ -0.66
RNF4-213ENST00000509388 LINC00322Q6ZN03 302 aaPredicted RBP10.93□□□□□ -0.66
RNF4-213ENST00000509388 C5orf17Q8NAS9 161 aa10.93□□□□□ -0.66
RNF4-213ENST00000509388 ASCL2Q99929 193 aa10.93□□□□□ -0.66
RNF4-213ENST00000509388 MANBALQ9NQG1 85 aa10.93□□□□□ -0.66
RNF4-213ENST00000509388 YTHDF2Q9Y5A9 579 aaKnown RBP10.93□□□□□ -0.66
RNF4-213ENST00000509388 DIRC3C9JPN6 131 aa10.92□□□□□ -0.66
RNF4-213ENST00000509388 UBE2CO00762 179 aa10.92□□□□□ -0.66
RNF4-213ENST00000509388 CA1P00915 261 aaPredicted RBP10.92□□□□□ -0.66
RNF4-213ENST00000509388 CCL20P78556 96 aa10.92□□□□□ -0.66
RNF4-213ENST00000509388 HAGHQ16775 308 aa10.92□□□□□ -0.66
RNF4-213ENST00000509388 TMEM78Q5T7P6 136 aa10.92□□□□□ -0.66
RNF4-213ENST00000509388 ARL6IP6Q8N6S5 226 aa10.92□□□□□ -0.66
RNF4-213ENST00000509388 LINC00477Q96M19 166 aa10.92□□□□□ -0.66
RNF4-213ENST00000509388 B9D2Q9BPU9 175 aa10.92□□□□□ -0.66
RNF4-213ENST00000509388 EPDR1Q9UM22 224 aa10.92□□□□□ -0.66
RNF4-213ENST00000509388 ARL2-SNX15V9GYD0 113 aa10.92□□□□□ -0.66
RNF4-213ENST00000509388 DNAH3Q8TD57 4116 aa10.92□□□□□ -0.66
RNF4-213ENST00000509388 IGKV2-40A0A087WW87 121 aaPredicted RBP10.91□□□□□ -0.66
RNF4-213ENST00000509388 GGTLC3B5MD39 225 aa10.91□□□□□ -0.66
RNF4-213ENST00000509388 F6UZH7 168 aa10.91□□□□□ -0.66
RNF4-213ENST00000509388 IGKV2D-40P01614 121 aaPredicted RBP10.91□□□□□ -0.66
RNF4-213ENST00000509388 RAB14P61106 215 aa10.91□□□□□ -0.66
RNF4-213ENST00000509388 GNG5P63218 68 aa10.91□□□□□ -0.66
RNF4-213ENST00000509388 GOLT1AQ6ZVE7 132 aa10.91□□□□□ -0.66
RNF4-213ENST00000509388 CLUHP3Q96NS8 147 aa10.91□□□□□ -0.66
RNF4-213ENST00000509388 C1QTNF4Q9BXJ3 329 aa10.91□□□□□ -0.66
RNF4-213ENST00000509388 SERTM2A0A1B0GWG4 89 aa10.9□□□□□ -0.66
RNF4-213ENST00000509388 RBAKDNA6NC62 111 aa10.9□□□□□ -0.66
RNF4-213ENST00000509388 NPIPB6E9PJ23 425 aa10.9□□□□□ -0.66
RNF4-213ENST00000509388 TCRAP04437 139 aa10.9□□□□□ -0.66
RNF4-213ENST00000509388 TSPOP30536 169 aa10.9□□□□□ -0.66
RNF4-213ENST00000509388 FXYD7P58549 80 aa10.9□□□□□ -0.66
RNF4-213ENST00000509388 ERCC8Q13216 396 aa10.9□□□□□ -0.66
RNF4-213ENST00000509388 SBSPONQ8IVN8 264 aa10.9□□□□□ -0.66
RNF4-213ENST00000509388 TCEAL7Q9BRU2 100 aa10.9□□□□□ -0.66
RNF4-213ENST00000509388 AGPAT4-IT1Q9H0P7 198 aa10.9□□□□□ -0.66
RNF4-213ENST00000509388 C11orf94C9JXX5 98 aa10.89□□□□□ -0.67
RNF4-213ENST00000509388 AMBPP02760 352 aa10.89□□□□□ -0.67
RNF4-213ENST00000509388 TAGLN2P37802 199 aaKnown RBP10.89□□□□□ -0.67
RNF4-213ENST00000509388 ATP5G3P48201 142 aa10.89□□□□□ -0.67
RNF4-213ENST00000509388 C9orf47Q6ZRZ4 202 aa10.89□□□□□ -0.67
RNF4-213ENST00000509388 HIST1H2BAQ96A08 127 aa10.89□□□□□ -0.67
RNF4-213ENST00000509388 VGLL1Q99990 258 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms