RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 PXMP4Q9Y6I8 212 aa8.77□□□□□ -1.01
PDPN-208ENST00000509009 NACAE9PAV3 2078 aa8.76□□□□□ -1.01
PDPN-208ENST00000509009 H7BYZ3 331 aa8.76□□□□□ -1.01
PDPN-208ENST00000509009 S100A11P31949 105 aa8.76□□□□□ -1.01
PDPN-208ENST00000509009 VWC2Q2TAL6 325 aa8.76□□□□□ -1.01
PDPN-208ENST00000509009 C1orf134Q5TEV5 83 aa8.76□□□□□ -1.01
PDPN-208ENST00000509009 TMEM252Q8N6L7 170 aa8.76□□□□□ -1.01
PDPN-208ENST00000509009 OR1L4Q8NGR5 311 aa8.76□□□□□ -1.01
PDPN-208ENST00000509009 RNASE8Q8TDE3 154 aaKnown RBP8.76□□□□□ -1.01
PDPN-208ENST00000509009 CHAC2Q8WUX2 184 aa8.76□□□□□ -1.01
PDPN-208ENST00000509009 C20orf144Q9BQM9 153 aa8.76□□□□□ -1.01
PDPN-208ENST00000509009 NOP10Q9NPE3 64 aaKnown RBP8.76□□□□□ -1.01
PDPN-208ENST00000509009 IGSF23A1L1A6 192 aa8.75□□□□□ -1.01
PDPN-208ENST00000509009 NUDT3O95989 172 aa8.75□□□□□ -1.01
PDPN-208ENST00000509009 CT45A10P0DMU9 189 aa8.75□□□□□ -1.01
PDPN-208ENST00000509009 PVALBP20472 110 aaPredicted RBP8.75□□□□□ -1.01
PDPN-208ENST00000509009 RPL29P47914 159 aaKnown RBP8.75□□□□□ -1.01
PDPN-208ENST00000509009 SULT1A1P50225 295 aa8.75□□□□□ -1.01
PDPN-208ENST00000509009 GUK1Q16774 197 aa8.75□□□□□ -1.01
PDPN-208ENST00000509009 SOHLH1Q5JUK2 328 aa8.75□□□□□ -1.01
PDPN-208ENST00000509009 GFI1BQ5VTD9 330 aa8.75□□□□□ -1.01
PDPN-208ENST00000509009 TMEM263Q8WUH6 116 aaKnown RBP8.75□□□□□ -1.01
PDPN-208ENST00000509009 ATG101Q9BSB4 218 aa8.75□□□□□ -1.01
PDPN-208ENST00000509009 CCDC32Q9BV29 185 aa8.75□□□□□ -1.01
PDPN-208ENST00000509009 LYRM2Q9NU23 88 aaPredicted RBP8.75□□□□□ -1.01
PDPN-208ENST00000509009 SLC39A9Q9NUM3 307 aa8.75□□□□□ -1.01
PDPN-208ENST00000509009 ZNF586Q9NXT0 402 aa8.75□□□□□ -1.01
PDPN-208ENST00000509009 FAM240BA0A1B0GVZ2 78 aa8.74□□□□□ -1.01
PDPN-208ENST00000509009 MED14OSP0DP75 135 aa8.74□□□□□ -1.01
PDPN-208ENST00000509009 RAB32Q13637 225 aa8.74□□□□□ -1.01
PDPN-208ENST00000509009 CCDC28AQ8IWP9 274 aa8.74□□□□□ -1.01
PDPN-208ENST00000509009 LINC00612Q8N6U2 182 aa8.74□□□□□ -1.01
PDPN-208ENST00000509009 ZNRF2Q8NHG8 242 aa8.74□□□□□ -1.01
PDPN-208ENST00000509009 PFDN5Q99471 154 aa8.74□□□□□ -1.01
PDPN-208ENST00000509009 DNAH11Q96DT5 4516 aa8.73□□□□□ -1.01
PDPN-208ENST00000509009 NPIPB6E9PJ23 425 aa8.73□□□□□ -1.01
PDPN-208ENST00000509009 S100A10P60903 97 aa8.73□□□□□ -1.01
PDPN-208ENST00000509009 ATP6V1FQ16864 119 aa8.73□□□□□ -1.01
PDPN-208ENST00000509009 RNF141Q8WVD5 230 aa8.73□□□□□ -1.01
PDPN-208ENST00000509009 ODF3Q96PU9 254 aa8.73□□□□□ -1.01
PDPN-208ENST00000509009 LINC00588Q9Y4M8 146 aa8.73□□□□□ -1.01
PDPN-208ENST00000509009 DYNC1H1Q14204 4646 aaKnown RBP8.73□□□□□ -1.01
PDPN-208ENST00000509009 TRBV19A0A075B6N1 114 aa8.72□□□□□ -1.01
PDPN-208ENST00000509009 TRAV12-3A0A0B4J271 114 aa8.72□□□□□ -1.01
PDPN-208ENST00000509009 NBDYA0A0U1RRE5 68 aa8.72□□□□□ -1.01
PDPN-208ENST00000509009 J3KRW8 73 aa8.72□□□□□ -1.01
PDPN-208ENST00000509009 ZNF253O75346 499 aa8.72□□□□□ -1.01
PDPN-208ENST00000509009 NDUFB4O95168 129 aa8.72□□□□□ -1.01
PDPN-208ENST00000509009 HIST1H1EP10412 219 aaKnown RBP8.72□□□□□ -1.01
PDPN-208ENST00000509009 LEPP41159 167 aa8.72□□□□□ -1.01
PDPN-208ENST00000509009 CCL18P55774 89 aa8.72□□□□□ -1.01
PDPN-208ENST00000509009 HBG1P69891 147 aa8.72□□□□□ -1.01
PDPN-208ENST00000509009 HBG2P69892 147 aa8.72□□□□□ -1.01
PDPN-208ENST00000509009 BAXQ07812 192 aa8.72□□□□□ -1.01
PDPN-208ENST00000509009 OR5I1Q13606 314 aa8.72□□□□□ -1.01
PDPN-208ENST00000509009 MZT2BQ6NZ67 158 aa8.72□□□□□ -1.01
PDPN-208ENST00000509009 STX12Q86Y82 276 aa8.72□□□□□ -1.01
PDPN-208ENST00000509009 TMEM14CQ9P0S9 112 aa8.72□□□□□ -1.01
PDPN-208ENST00000509009 MUC4Q99102 2169 aa8.71□□□□□ -1.01
PDPN-208ENST00000509009 UBE2L5PA0A1B0GUS4 154 aa8.71□□□□□ -1.02
PDPN-208ENST00000509009 M0R3E3 92 aa8.71□□□□□ -1.02
PDPN-208ENST00000509009 FGF7P21781 194 aa8.71□□□□□ -1.02
PDPN-208ENST00000509009 NHLH2Q02577 135 aa8.71□□□□□ -1.02
PDPN-208ENST00000509009 ERCC8Q13216 396 aa8.71□□□□□ -1.02
PDPN-208ENST00000509009 ASAH1Q13510 395 aa8.71□□□□□ -1.02
PDPN-208ENST00000509009 LINC00299Q6ZSB3 139 aa8.71□□□□□ -1.02
PDPN-208ENST00000509009 LINC00477Q96M19 166 aa8.71□□□□□ -1.02
PDPN-208ENST00000509009 GPN1Q9HCN4 374 aaPredicted RBP8.71□□□□□ -1.02
PDPN-208ENST00000509009 TRAV26-1A0A087WT03 109 aa8.7□□□□□ -1.02
PDPN-208ENST00000509009 GAGE12BA1L429 117 aa8.7□□□□□ -1.02
PDPN-208ENST00000509009 SNURFLB1AK76 121 aa8.7□□□□□ -1.02
PDPN-208ENST00000509009 MPDU1O75352 247 aa8.7□□□□□ -1.02
PDPN-208ENST00000509009 GAGE7O76087 117 aa8.7□□□□□ -1.02
PDPN-208ENST00000509009 GAGE12FP0CL80 117 aa8.7□□□□□ -1.02
PDPN-208ENST00000509009 GAGE12GP0CL81 117 aa8.7□□□□□ -1.02
PDPN-208ENST00000509009 GAGE12IP0CL82 117 aa8.7□□□□□ -1.02
PDPN-208ENST00000509009 PYYP10082 97 aa8.7□□□□□ -1.02
PDPN-208ENST00000509009 HOXA5P20719 270 aa8.7□□□□□ -1.02
PDPN-208ENST00000509009 DAZ2Q13117 558 aaKnown RBP8.7□□□□□ -1.02
PDPN-208ENST00000509009 CLINT1Q14677 625 aa8.7□□□□□ -1.02
PDPN-208ENST00000509009 GCSAMLQ5JQS6 135 aa8.7□□□□□ -1.02
PDPN-208ENST00000509009 SSX7Q7RTT5 188 aa8.7□□□□□ -1.02
PDPN-208ENST00000509009 RXFP4Q8TDU9 374 aa8.7□□□□□ -1.02
PDPN-208ENST00000509009 GNPNAT1Q96EK6 184 aaPredicted RBP8.7□□□□□ -1.02
PDPN-208ENST00000509009 MRPL53Q96EL3 112 aaKnown RBP8.7□□□□□ -1.02
PDPN-208ENST00000509009 PYGO2Q9BRQ0 406 aa8.7□□□□□ -1.02
PDPN-208ENST00000509009 AGPAT4-IT1Q9H0P7 198 aa8.7□□□□□ -1.02
PDPN-208ENST00000509009 PRELID1Q9Y255 219 aa8.7□□□□□ -1.02
PDPN-208ENST00000509009 TIMM9Q9Y5J7 89 aa8.7□□□□□ -1.02
PDPN-208ENST00000509009 ZNF324O75467 553 aaPredicted RBP8.69□□□□□ -1.02
PDPN-208ENST00000509009 SIX6O95475 246 aa8.69□□□□□ -1.02
PDPN-208ENST00000509009 RLN2P04090 185 aa8.69□□□□□ -1.02
PDPN-208ENST00000509009 SLC25A5P05141 298 aaKnown RBP8.69□□□□□ -1.02
PDPN-208ENST00000509009 M6PRP20645 277 aa8.69□□□□□ -1.02
PDPN-208ENST00000509009 TNP2Q05952 138 aa8.69□□□□□ -1.02
PDPN-208ENST00000509009 PDE6HQ13956 83 aa8.69□□□□□ -1.02
PDPN-208ENST00000509009 S100ZQ8WXG8 99 aa8.69□□□□□ -1.02
PDPN-208ENST00000509009 ZNF503Q96F45 646 aa8.69□□□□□ -1.02
PDPN-208ENST00000509009 FAM167A-AS1Q96KT0 104 aa8.69□□□□□ -1.02
PDPN-208ENST00000509009 FAM19A4Q96LR4 140 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms