RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 LINC01587Q99440 93 aa10.54□□□□□ -0.72
UBE2D3-228ENST00000508974 PFDN5Q99471 154 aa10.54□□□□□ -0.72
UBE2D3-228ENST00000508974 J3KRW8 73 aa10.53□□□□□ -0.72
UBE2D3-228ENST00000508974 RLN2P04090 185 aa10.53□□□□□ -0.72
UBE2D3-228ENST00000508974 RPL29P47914 159 aaKnown RBP10.53□□□□□ -0.72
UBE2D3-228ENST00000508974 CLINT1Q14677 625 aa10.53□□□□□ -0.72
UBE2D3-228ENST00000508974 KIR3DS1Q14943 382 aa10.53□□□□□ -0.72
UBE2D3-228ENST00000508974 GCSAMLQ5JQS6 135 aa10.53□□□□□ -0.72
UBE2D3-228ENST00000508974 OR5C1Q8NGR4 320 aa10.53□□□□□ -0.72
UBE2D3-228ENST00000508974 E5RGE8 158 aa10.52□□□□□ -0.73
UBE2D3-228ENST00000508974 H0YIZ8 118 aa10.52□□□□□ -0.73
UBE2D3-228ENST00000508974 PRAF2O60831 178 aa10.52□□□□□ -0.73
UBE2D3-228ENST00000508974 FCN2Q15485 313 aa10.52□□□□□ -0.73
UBE2D3-228ENST00000508974 ATP6V1FQ16864 119 aa10.52□□□□□ -0.73
UBE2D3-228ENST00000508974 OR10J6PQ8NGY7 276 aa10.52□□□□□ -0.73
UBE2D3-228ENST00000508974 NPCDR1Q9BY65 106 aa10.52□□□□□ -0.73
UBE2D3-228ENST00000508974 NMES1Q9C002 83 aa10.52□□□□□ -0.73
UBE2D3-228ENST00000508974 ZNF586Q9NXT0 402 aa10.52□□□□□ -0.73
UBE2D3-228ENST00000508974 DNAH10Q8IVF4 4471 aa10.51□□□□□ -0.73
UBE2D3-228ENST00000508974 SSNA1O43805 119 aa10.51□□□□□ -0.73
UBE2D3-228ENST00000508974 DEFB130BP0DP73 79 aa10.51□□□□□ -0.73
UBE2D3-228ENST00000508974 DEFB130AP0DP74 79 aa10.51□□□□□ -0.73
UBE2D3-228ENST00000508974 PYYP10082 97 aa10.51□□□□□ -0.73
UBE2D3-228ENST00000508974 CDKN1BP46527 198 aa10.51□□□□□ -0.73
UBE2D3-228ENST00000508974 H2BFSP57053 126 aa10.51□□□□□ -0.73
UBE2D3-228ENST00000508974 DEFA1P59665 94 aa10.51□□□□□ -0.73
UBE2D3-228ENST00000508974 DEFA3P59666 94 aa10.51□□□□□ -0.73
UBE2D3-228ENST00000508974 SAT2Q96F10 170 aaPredicted RBP10.51□□□□□ -0.73
UBE2D3-228ENST00000508974 SLC25A31Q9H0C2 315 aa10.51□□□□□ -0.73
UBE2D3-228ENST00000508974 DNAH6Q9C0G6 4158 aa10.5□□□□□ -0.73
UBE2D3-228ENST00000508974 P0DMU3 169 aa10.5□□□□□ -0.73
UBE2D3-228ENST00000508974 FAM231AP0DMU4 169 aa10.5□□□□□ -0.73
UBE2D3-228ENST00000508974 FAM231CP0DMU5 169 aa10.5□□□□□ -0.73
UBE2D3-228ENST00000508974 GUK1Q16774 197 aa10.5□□□□□ -0.73
UBE2D3-228ENST00000508974 BLNKQ8WV28 456 aa10.5□□□□□ -0.73
UBE2D3-228ENST00000508974 MARVELD1Q9BSK0 173 aa10.5□□□□□ -0.73
UBE2D3-228ENST00000508974 M0R3E3 92 aa10.49□□□□□ -0.73
UBE2D3-228ENST00000508974 MPDU1O75352 247 aa10.49□□□□□ -0.73
UBE2D3-228ENST00000508974 OXA1LQ15070 435 aa10.49□□□□□ -0.73
UBE2D3-228ENST00000508974 TMEM88Q6PEY1 159 aa10.49□□□□□ -0.73
UBE2D3-228ENST00000508974 UBE2DNLQ8IWF7 75 aa10.49□□□□□ -0.73
UBE2D3-228ENST00000508974 TMEM256Q8N2U0 113 aa10.49□□□□□ -0.73
UBE2D3-228ENST00000508974 PPP1R1CQ8WVI7 109 aa10.49□□□□□ -0.73
UBE2D3-228ENST00000508974 TRBV19A0A075B6N1 114 aa10.48□□□□□ -0.73
UBE2D3-228ENST00000508974 PLAC8L1A1L4L8 177 aa10.48□□□□□ -0.73
UBE2D3-228ENST00000508974 LYRM9A8MSI8 78 aa10.48□□□□□ -0.73
UBE2D3-228ENST00000508974 M0R2N4 97 aa10.48□□□□□ -0.73
UBE2D3-228ENST00000508974 TSPOP30536 169 aa10.48□□□□□ -0.73
UBE2D3-228ENST00000508974 TAS2R60P59551 318 aa10.48□□□□□ -0.73
UBE2D3-228ENST00000508974 CYCSP99999 105 aaKnown RBP10.48□□□□□ -0.73
UBE2D3-228ENST00000508974 GFI1BQ5VTD9 330 aa10.48□□□□□ -0.73
UBE2D3-228ENST00000508974 MIR17HGQ75NE6 70 aa10.48□□□□□ -0.73
UBE2D3-228ENST00000508974 POM121L12Q8N7R1 296 aa10.48□□□□□ -0.73
UBE2D3-228ENST00000508974 CHAC2Q8WUX2 184 aa10.48□□□□□ -0.73
UBE2D3-228ENST00000508974 SLC25A2Q9BXI2 301 aa10.48□□□□□ -0.73
UBE2D3-228ENST00000508974 TIMM9Q9Y5J7 89 aa10.48□□□□□ -0.73
UBE2D3-228ENST00000508974 NPIPB6E9PJ23 425 aa10.47□□□□□ -0.73
UBE2D3-228ENST00000508974 NDUFB4O95168 129 aa10.47□□□□□ -0.73
UBE2D3-228ENST00000508974 CT45A10P0DMU9 189 aa10.47□□□□□ -0.73
UBE2D3-228ENST00000508974 ERCC8Q13216 396 aa10.47□□□□□ -0.73
UBE2D3-228ENST00000508974 EXOC3-AS1Q8N2X6 119 aa10.47□□□□□ -0.73
UBE2D3-228ENST00000508974 C16orf74Q96GX8 76 aa10.47□□□□□ -0.73
UBE2D3-228ENST00000508974 SMIM3Q9BZL3 60 aa10.47□□□□□ -0.73
UBE2D3-228ENST00000508974 WDR61Q9GZS3 305 aaKnown RBP10.47□□□□□ -0.73
UBE2D3-228ENST00000508974 TMEM14CQ9P0S9 112 aa10.47□□□□□ -0.73
UBE2D3-228ENST00000508974 IGLV2-18A0A075B6J9 118 aa10.46□□□□□ -0.73
UBE2D3-228ENST00000508974 TRAV12-3A0A0B4J271 114 aa10.46□□□□□ -0.73
UBE2D3-228ENST00000508974 F5H768 121 aa10.46□□□□□ -0.73
UBE2D3-228ENST00000508974 H7BYZ3 331 aa10.46□□□□□ -0.73
UBE2D3-228ENST00000508974 HIST1H1EP10412 219 aaKnown RBP10.46□□□□□ -0.73
UBE2D3-228ENST00000508974 LEPP41159 167 aa10.46□□□□□ -0.73
UBE2D3-228ENST00000508974 FAM210BQ96KR6 192 aa10.46□□□□□ -0.73
UBE2D3-228ENST00000508974 NOP10Q9NPE3 64 aaKnown RBP10.46□□□□□ -0.73
UBE2D3-228ENST00000508974 ZNF253O75346 499 aa10.45□□□□□ -0.74
UBE2D3-228ENST00000508974 MPC2O95563 127 aa10.45□□□□□ -0.74
UBE2D3-228ENST00000508974 OR10J4P0C629 311 aa10.45□□□□□ -0.74
UBE2D3-228ENST00000508974 FAM122CQ6P4D5 195 aa10.45□□□□□ -0.74
UBE2D3-228ENST00000508974 TMEM263Q8WUH6 116 aaKnown RBP10.45□□□□□ -0.74
UBE2D3-228ENST00000508974 ATP5SQ99766 215 aa10.45□□□□□ -0.74
UBE2D3-228ENST00000508974 BATF3Q9NR55 127 aa10.45□□□□□ -0.74
UBE2D3-228ENST00000508974 MBD2Q9UBB5 411 aa10.45□□□□□ -0.74
UBE2D3-228ENST00000508974 TIMM8BQ9Y5J9 83 aaPredicted RBP10.45□□□□□ -0.74
UBE2D3-228ENST00000508974 NACAE9PAV3 2078 aa10.45□□□□□ -0.74
UBE2D3-228ENST00000508974 IGKV2-40A0A087WW87 121 aaPredicted RBP10.44□□□□□ -0.74
UBE2D3-228ENST00000508974 C17orf112F2Z3M2 114 aa10.44□□□□□ -0.74
UBE2D3-228ENST00000508974 IGKV2D-40P01614 121 aaPredicted RBP10.44□□□□□ -0.74
UBE2D3-228ENST00000508974 PET100P0DJ07 73 aa10.44□□□□□ -0.74
UBE2D3-228ENST00000508974 ICAM4Q14773 271 aa10.44□□□□□ -0.74
UBE2D3-228ENST00000508974 RNASE8Q8TDE3 154 aaKnown RBP10.44□□□□□ -0.74
UBE2D3-228ENST00000508974 FAM167A-AS1Q96KT0 104 aa10.44□□□□□ -0.74
UBE2D3-228ENST00000508974 AAMDCQ9H7C9 122 aa10.44□□□□□ -0.74
UBE2D3-228ENST00000508974 KCNIP2Q9NS61 270 aa10.44□□□□□ -0.74
UBE2D3-228ENST00000508974 HSPB11Q9Y547 144 aa10.44□□□□□ -0.74
UBE2D3-228ENST00000508974 OR7C2O60412 319 aa10.43□□□□□ -0.74
UBE2D3-228ENST00000508974 EIF3GO75821 320 aaKnown RBP eCLIP10.43□□□□□ -0.746e-9■■■■□ 22.8
UBE2D3-228ENST00000508974 NUDT3O95989 172 aa10.43□□□□□ -0.74
UBE2D3-228ENST00000508974 ATP5G1P05496 136 aa10.43□□□□□ -0.74
UBE2D3-228ENST00000508974 RPL12P30050 165 aaKnown RBP10.43□□□□□ -0.74
UBE2D3-228ENST00000508974 ATP5G3P48201 142 aa10.43□□□□□ -0.74
UBE2D3-228ENST00000508974 FFAR4Q5NUL3 377 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms