RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 GTSCR1Q86UQ5 136 aa6.43□□□□□ -1.38
USP46-207ENST00000508499 CCDC28AQ8IWP9 274 aa6.43□□□□□ -1.38
USP46-207ENST00000508499 AAMDCQ9H7C9 122 aa6.43□□□□□ -1.38
USP46-207ENST00000508499 MANBALQ9NQG1 85 aa6.43□□□□□ -1.38
USP46-207ENST00000508499 OTORQ9NRC9 128 aa6.43□□□□□ -1.38
USP46-207ENST00000508499 PPP1R14DQ9NXH3 145 aa6.43□□□□□ -1.38
USP46-207ENST00000508499 NBEAL1Q6ZS30 2694 aa6.43□□□□□ -1.38
USP46-207ENST00000508499 SERTM2A0A1B0GWG4 89 aa6.42□□□□□ -1.38
USP46-207ENST00000508499 RBAKDNA6NC62 111 aa6.42□□□□□ -1.38
USP46-207ENST00000508499 FAM74A7A6NL05 159 aa6.42□□□□□ -1.38
USP46-207ENST00000508499 G3V4G9 280 aa6.42□□□□□ -1.38
USP46-207ENST00000508499 SLC17A3O00476 420 aa6.42□□□□□ -1.38
USP46-207ENST00000508499 HMGB3O15347 200 aaKnown RBP6.42□□□□□ -1.38
USP46-207ENST00000508499 SLC25A5P05141 298 aaKnown RBP6.42□□□□□ -1.38
USP46-207ENST00000508499 KRTAP10-11P60412 298 aa6.42□□□□□ -1.38
USP46-207ENST00000508499 PSG3Q16557 428 aa6.42□□□□□ -1.38
USP46-207ENST00000508499 CLLU1Q5K131 121 aa6.42□□□□□ -1.38
USP46-207ENST00000508499 Q8N1Y9 231 aa6.42□□□□□ -1.38
USP46-207ENST00000508499 C5orf17Q8NAS9 161 aa6.42□□□□□ -1.38
USP46-207ENST00000508499 RXFP4Q8TDU9 374 aa6.42□□□□□ -1.38
USP46-207ENST00000508499 C16orf92Q96LL3 132 aa6.42□□□□□ -1.38
USP46-207ENST00000508499 MRPL18Q9H0U6 180 aaKnown RBP6.42□□□□□ -1.38
USP46-207ENST00000508499 Q9H3A6 140 aa6.42□□□□□ -1.38
USP46-207ENST00000508499 MAP6D1Q9H9H5 199 aa6.42□□□□□ -1.38
USP46-207ENST00000508499 FBLL1A6NHQ2 334 aaKnown RBP6.42□□□□□ -1.38
USP46-207ENST00000508499 OR11H12B2RN74 326 aa6.42□□□□□ -1.38
USP46-207ENST00000508499 FGF8P55075 233 aaPredicted RBP6.42□□□□□ -1.38
USP46-207ENST00000508499 GUCA2BQ16661 112 aa6.42□□□□□ -1.38
USP46-207ENST00000508499 FOXI2Q6ZQN5 318 aa6.42□□□□□ -1.38
USP46-207ENST00000508499 GBGT1Q8N5D6 347 aa6.42□□□□□ -1.38
USP46-207ENST00000508499 FAM24BQ8N5W8 94 aa6.42□□□□□ -1.38
USP46-207ENST00000508499 SMDT1Q9H4I9 107 aa6.42□□□□□ -1.38
USP46-207ENST00000508499 MED9Q9NWA0 146 aa6.42□□□□□ -1.38
USP46-207ENST00000508499 MGAM2Q2M2H8 2515 aa6.41□□□□□ -1.38
USP46-207ENST00000508499 CMYA5Q8N3K9 4069 aa6.41□□□□□ -1.38
USP46-207ENST00000508499 TRBV7-9A0A0J9YWB2 115 aa6.41□□□□□ -1.38
USP46-207ENST00000508499 GGTLC3B5MD39 225 aa6.41□□□□□ -1.38
USP46-207ENST00000508499 IFNA1P01562 189 aa6.41□□□□□ -1.38
USP46-207ENST00000508499 RANP62826 216 aaKnown RBP6.41□□□□□ -1.38
USP46-207ENST00000508499 CCL20P78556 96 aa6.41□□□□□ -1.38
USP46-207ENST00000508499 ANKRD39Q53RE8 183 aa6.41□□□□□ -1.38
USP46-207ENST00000508499 BLNKQ8WV28 456 aa6.41□□□□□ -1.38
USP46-207ENST00000508499 HIST1H2BAQ96A08 127 aa6.41□□□□□ -1.38
USP46-207ENST00000508499 ODF3Q96PU9 254 aa6.41□□□□□ -1.38
USP46-207ENST00000508499 TMPRSS5Q9H3S3 457 aa6.41□□□□□ -1.38
USP46-207ENST00000508499 SAV1Q9H4B6 383 aaPredicted RBP6.41□□□□□ -1.38
USP46-207ENST00000508499 LENEPQ9Y5L5 61 aa6.41□□□□□ -1.38
USP46-207ENST00000508499 IGKV3-7A0A075B6H7 116 aa6.4□□□□□ -1.39
USP46-207ENST00000508499 A0A0J9YX75 114 aa6.4□□□□□ -1.39
USP46-207ENST00000508499 PGPA6NDG6 321 aa6.4□□□□□ -1.39
USP46-207ENST00000508499 CD7P09564 240 aa6.4□□□□□ -1.39
USP46-207ENST00000508499 ZNF688P0C7X2 276 aa6.4□□□□□ -1.39
USP46-207ENST00000508499 BCL2P10415 239 aa6.4□□□□□ -1.39
USP46-207ENST00000508499 HLA-DRB4P13762 266 aa6.4□□□□□ -1.39
USP46-207ENST00000508499 CD81P60033 236 aa6.4□□□□□ -1.39
USP46-207ENST00000508499 RAB14P61106 215 aa6.4□□□□□ -1.39
USP46-207ENST00000508499 MEF2BQ02080 365 aaPredicted RBP6.4□□□□□ -1.39
USP46-207ENST00000508499 ICAM4Q14773 271 aa6.4□□□□□ -1.39
USP46-207ENST00000508499 PSMG4Q5JS54 123 aa6.4□□□□□ -1.39
USP46-207ENST00000508499 C9orf47Q6ZRZ4 202 aa6.4□□□□□ -1.39
USP46-207ENST00000508499 EXOC3-AS1Q8N2X6 119 aa6.4□□□□□ -1.39
USP46-207ENST00000508499 RPUSD4Q96CM3 377 aaKnown RBP6.4□□□□□ -1.39
USP46-207ENST00000508499 C20orf173Q96LM9 149 aa6.4□□□□□ -1.39
USP46-207ENST00000508499 VAX2Q9UIW0 290 aa6.4□□□□□ -1.39
USP46-207ENST00000508499 KLF12Q9Y4X4 402 aa6.4□□□□□ -1.39
USP46-207ENST00000508499 YTHDF2Q9Y5A9 579 aaKnown RBP6.4□□□□□ -1.39
USP46-207ENST00000508499 HLA-DRB4X5D2U9 266 aa6.4□□□□□ -1.39
USP46-207ENST00000508499 TRBV6-1A0A0K0K1D8 114 aa6.39□□□□□ -1.39
USP46-207ENST00000508499 DIRC3C9JPN6 131 aa6.39□□□□□ -1.39
USP46-207ENST00000508499 NPIPB6E9PJ23 425 aa6.39□□□□□ -1.39
USP46-207ENST00000508499 TMEM250H0YL14 139 aa6.39□□□□□ -1.39
USP46-207ENST00000508499 PDE6DO43924 150 aa6.39□□□□□ -1.39
USP46-207ENST00000508499 PAGE4O60829 102 aa6.39□□□□□ -1.39
USP46-207ENST00000508499 EIF3GO75821 320 aaKnown RBP eCLIP6.39□□□□□ -1.39
USP46-207ENST00000508499 DUSP14O95147 198 aaKnown RBP6.39□□□□□ -1.39
USP46-207ENST00000508499 TCRAP04437 139 aa6.39□□□□□ -1.39
USP46-207ENST00000508499 CSN1S1P47710 185 aa6.39□□□□□ -1.39
USP46-207ENST00000508499 TFPI2P48307 235 aa6.39□□□□□ -1.39
USP46-207ENST00000508499 DEFB131AP59861 70 aa6.39□□□□□ -1.39
USP46-207ENST00000508499 SUMO1P63165 101 aaKnown RBP6.39□□□□□ -1.39
USP46-207ENST00000508499 ZNF506Q5JVG8 444 aa6.39□□□□□ -1.39
USP46-207ENST00000508499 LINC00322Q6ZN03 302 aaPredicted RBP6.39□□□□□ -1.39
USP46-207ENST00000508499 WFDC3Q8IUB2 231 aa6.39□□□□□ -1.39
USP46-207ENST00000508499 RNF182Q8N6D2 247 aa6.39□□□□□ -1.39
USP46-207ENST00000508499 OR8A1Q8NGG7 326 aa6.39□□□□□ -1.39
USP46-207ENST00000508499 C11orf52Q96A22 123 aa6.39□□□□□ -1.39
USP46-207ENST00000508499 ATG101Q9BSB4 218 aa6.39□□□□□ -1.39
USP46-207ENST00000508499 EPDR1Q9UM22 224 aa6.39□□□□□ -1.39
USP46-207ENST00000508499 AGRNO00468 2067 aa6.38□□□□□ -1.39
USP46-207ENST00000508499 KIR2DL5BA0A0G2JN68 375 aa6.38□□□□□ -1.39
USP46-207ENST00000508499 KIR2DL5BA0A0G2JPC4 375 aa6.38□□□□□ -1.39
USP46-207ENST00000508499 LOC102723971A0A1B0GUV8 181 aa6.38□□□□□ -1.39
USP46-207ENST00000508499 RAB19A4D1S5 217 aa6.38□□□□□ -1.39
USP46-207ENST00000508499 RBFOX3A6NFN3 312 aa6.38□□□□□ -1.39
USP46-207ENST00000508499 C11orf94C9JXX5 98 aa6.38□□□□□ -1.39
USP46-207ENST00000508499 F6UZH7 168 aa6.38□□□□□ -1.39
USP46-207ENST00000508499 H3BMM0 161 aa6.38□□□□□ -1.39
USP46-207ENST00000508499 H3BTX0 84 aa6.38□□□□□ -1.39
USP46-207ENST00000508499 K7EQM0 130 aa6.38□□□□□ -1.39
USP46-207ENST00000508499 M0R3E3 92 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms