RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-208ENST00000508258 MT-ND6P03923 174 aa0.59□□□□□ -2.31
SMN2-208ENST00000508258 ANGP03950 147 aaKnown RBP0.59□□□□□ -2.31
SMN2-208ENST00000508258 CD2P06729 351 aa0.59□□□□□ -2.31
SMN2-208ENST00000508258 FABP4P15090 132 aa0.59□□□□□ -2.31
SMN2-208ENST00000508258 IL9P15248 144 aa0.59□□□□□ -2.31
SMN2-208ENST00000508258 PSG9Q00887 426 aa0.59□□□□□ -2.31
SMN2-208ENST00000508258 ALX1Q15699 326 aa0.59□□□□□ -2.31
SMN2-208ENST00000508258 Q5XG85 94 aa0.59□□□□□ -2.31
SMN2-208ENST00000508258 LINC00305Q7Z4B0 112 aa0.59□□□□□ -2.31
SMN2-208ENST00000508258 LINC00269Q8N2A0 174 aa0.59□□□□□ -2.31
SMN2-208ENST00000508258 MORN4Q8NDC4 146 aa0.59□□□□□ -2.31
SMN2-208ENST00000508258 OR4B1Q8NGF8 309 aa0.59□□□□□ -2.31
SMN2-208ENST00000508258 OR5H6Q8NGV6 325 aa0.59□□□□□ -2.31
SMN2-208ENST00000508258 LINC00526Q96FQ7 95 aa0.59□□□□□ -2.31
SMN2-208ENST00000508258 OBSCN-AS1Q96MR7 158 aa0.59□□□□□ -2.31
SMN2-208ENST00000508258 LXNQ9BS40 222 aa0.59□□□□□ -2.31
SMN2-208ENST00000508258 NIT2Q9NQR4 276 aa0.59□□□□□ -2.31
SMN2-208ENST00000508258 ORMDL1Q9P0S3 153 aa0.59□□□□□ -2.31
SMN2-208ENST00000508258 A2MP01023 1474 aa0.59□□□□□ -2.32
SMN2-208ENST00000508258 MCM3APO60318 1980 aa0.59□□□□□ -2.32
SMN2-208ENST00000508258 MYH10P35580 1976 aa0.59□□□□□ -2.32
SMN2-208ENST00000508258 FREM1Q5H8C1 2179 aa0.59□□□□□ -2.32
SMN2-208ENST00000508258 MYOFQ9NZM1 2061 aa0.58□□□□□ -2.32
SMN2-208ENST00000508258 OVOS2A0A0G2JMS6 1433 aa0.58□□□□□ -2.32
SMN2-208ENST00000508258 TRAV36DV7A0A075B6V5 113 aa0.58□□□□□ -2.32
SMN2-208ENST00000508258 TRBV6-7A0A0A0MS04 114 aa0.58□□□□□ -2.32
SMN2-208ENST00000508258 TRAV13-1A0A0B4J241 112 aa0.58□□□□□ -2.32
SMN2-208ENST00000508258 LOC105371267A0A1B0GV96 52 aa0.58□□□□□ -2.32
SMN2-208ENST00000508258 ARL5CA6NH57 179 aa0.58□□□□□ -2.32
SMN2-208ENST00000508258 CCL25O15444 150 aa0.58□□□□□ -2.32
SMN2-208ENST00000508258 NUPR1O60356 82 aa0.58□□□□□ -2.32
SMN2-208ENST00000508258 SCGB1A1P11684 91 aa0.58□□□□□ -2.32
SMN2-208ENST00000508258 COX7CP15954 63 aa0.58□□□□□ -2.32
SMN2-208ENST00000508258 NDUFA6P56556 154 aa0.58□□□□□ -2.32
SMN2-208ENST00000508258 KRTAP10-4P60372 401 aaPredicted RBP0.58□□□□□ -2.32
SMN2-208ENST00000508258 MRPS36P82909 103 aaKnown RBP0.58□□□□□ -2.32
SMN2-208ENST00000508258 OR8B8Q15620 311 aa0.58□□□□□ -2.32
SMN2-208ENST00000508258 VMA21Q3ZAQ7 101 aa0.58□□□□□ -2.32
SMN2-208ENST00000508258 SPRNQ5BIV9 151 aa0.58□□□□□ -2.32
SMN2-208ENST00000508258 FAM74A1Q5RGS3 127 aa0.58□□□□□ -2.32
SMN2-208ENST00000508258 GDF5OSQ5U4N7 250 aa0.58□□□□□ -2.32
SMN2-208ENST00000508258 TEX29Q8N6K0 151 aa0.58□□□□□ -2.32
SMN2-208ENST00000508258 TMEM229BQ8NBD8 167 aa0.58□□□□□ -2.32
SMN2-208ENST00000508258 TMEM35BQ8NCS4 154 aa0.58□□□□□ -2.32
SMN2-208ENST00000508258 OR10AG1Q8NH19 301 aa0.58□□□□□ -2.32
SMN2-208ENST00000508258 NAT14Q8WUY8 206 aa0.58□□□□□ -2.32
SMN2-208ENST00000508258 PRELID3AQ96N28 172 aa0.58□□□□□ -2.32
SMN2-208ENST00000508258 OR4C12Q96R67 309 aa0.58□□□□□ -2.32
SMN2-208ENST00000508258 SPANXA1Q9NS26 97 aa0.58□□□□□ -2.32
SMN2-208ENST00000508258 CBLN4Q9NTU7 201 aa0.58□□□□□ -2.32
SMN2-208ENST00000508258 JPT1Q9UK76 154 aa0.58□□□□□ -2.32
SMN2-208ENST00000508258 ZFP30Q9Y2G7 519 aa0.58□□□□□ -2.32
SMN2-208ENST00000508258 XIRP1Q702N8 1843 aaKnown RBP0.58□□□□□ -2.32
SMN2-208ENST00000508258 USP54Q70EL1 1684 aa0.58□□□□□ -2.32
SMN2-208ENST00000508258 MED23Q9ULK4 1368 aa0.57□□□□□ -2.32
SMN2-208ENST00000508258 EXPH5Q8NEV8 1989 aa0.57□□□□□ -2.32
SMN2-208ENST00000508258 KIAA1549Q9HCM3 1950 aa0.57□□□□□ -2.32
SMN2-208ENST00000508258 RP1P56715 2156 aa0.57□□□□□ -2.32
SMN2-208ENST00000508258 WDR97A6NE52 1622 aa0.57□□□□□ -2.32
SMN2-208ENST00000508258 FER1L6Q2WGJ9 1857 aa0.57□□□□□ -2.32
SMN2-208ENST00000508258 F8W1H4 67 aa0.57□□□□□ -2.32
SMN2-208ENST00000508258 H3BMG7 143 aa0.57□□□□□ -2.32
SMN2-208ENST00000508258 DEGS1O15121 323 aa0.57□□□□□ -2.32
SMN2-208ENST00000508258 ARL14EPLP0DKL9 152 aa0.57□□□□□ -2.32
SMN2-208ENST00000508258 ZNF25P17030 456 aaPredicted RBP0.57□□□□□ -2.32
SMN2-208ENST00000508258 CRYGSP22914 178 aa0.57□□□□□ -2.32
SMN2-208ENST00000508258 RPL22P35268 128 aaKnown RBP0.57□□□□□ -2.32
SMN2-208ENST00000508258 SRP9P49458 86 aaKnown RBP0.57□□□□□ -2.32
SMN2-208ENST00000508258 FOXA3P55318 350 aaPredicted RBP0.57□□□□□ -2.32
SMN2-208ENST00000508258 MAXP61244 160 aa0.57□□□□□ -2.32
SMN2-208ENST00000508258 MIR22HGQ0VDD5 57 aa0.57□□□□□ -2.32
SMN2-208ENST00000508258 CIRBPQ14011 172 aaKnown RBP0.57□□□□□ -2.32
SMN2-208ENST00000508258 LINC00322Q6ZN03 302 aaPredicted RBP0.57□□□□□ -2.32
SMN2-208ENST00000508258 FOXI2Q6ZQN5 318 aa0.57□□□□□ -2.32
SMN2-208ENST00000508258 ZCCHC23Q6ZST2 131 aa0.57□□□□□ -2.32
SMN2-208ENST00000508258 FAM19A2Q8N3H0 131 aa0.57□□□□□ -2.32
SMN2-208ENST00000508258 OR5A2Q8NGI9 324 aa0.57□□□□□ -2.32
SMN2-208ENST00000508258 ZNF431Q8TF32 576 aaPredicted RBP0.57□□□□□ -2.32
SMN2-208ENST00000508258 BORCS5Q969J3 196 aa0.57□□□□□ -2.32
SMN2-208ENST00000508258 ODF3Q96PU9 254 aa0.57□□□□□ -2.32
SMN2-208ENST00000508258 MRPL57Q9BQC6 102 aaKnown RBP0.57□□□□□ -2.32
SMN2-208ENST00000508258 CST11Q9H112 138 aa0.57□□□□□ -2.32
SMN2-208ENST00000508258 TPRKBQ9Y3C4 175 aa0.57□□□□□ -2.32
SMN2-208ENST00000508258 SIP14410 1827 aa0.57□□□□□ -2.32
SMN2-208ENST00000508258 PHRF1Q9P1Y6 1649 aaKnown RBP0.56□□□□□ -2.32
SMN2-208ENST00000508258 ERBINQ96RT1 1412 aa0.56□□□□□ -2.32
SMN2-208ENST00000508258 E9PCH4 1651 aa0.56□□□□□ -2.32
SMN2-208ENST00000508258 ALPK3Q96L96 1907 aa0.56□□□□□ -2.32
SMN2-208ENST00000508258 ALPK2Q86TB3 2170 aa0.56□□□□□ -2.32
SMN2-208ENST00000508258 COL1A1P02452 1464 aaPredicted RBP0.56□□□□□ -2.32
SMN2-208ENST00000508258 PEAK1Q9H792 1746 aa0.56□□□□□ -2.32
SMN2-208ENST00000508258 H3BRM9 83 aa0.56□□□□□ -2.32
SMN2-208ENST00000508258 IGHV3-33P01772 117 aa0.56□□□□□ -2.32
SMN2-208ENST00000508258 TRACP01848 142 aa0.56□□□□□ -2.32
SMN2-208ENST00000508258 SCTP09683 121 aa0.56□□□□□ -2.32
SMN2-208ENST00000508258 SAA1P0DJI8 122 aaPredicted RBP0.56□□□□□ -2.32
SMN2-208ENST00000508258 CCL4P13236 92 aa0.56□□□□□ -2.32
SMN2-208ENST00000508258 TPT1P13693 172 aaKnown RBP0.56□□□□□ -2.32
SMN2-208ENST00000508258 DIAPH2-AS1Q14236 149 aa0.56□□□□□ -2.32
SMN2-208ENST00000508258 TEN1Q86WV5 123 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms