RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 NPC2P61916 151 aa8.47□□□□□ -1.05
PDLIM5-210ENST00000508216 MRPS36P82909 103 aaKnown RBP8.47□□□□□ -1.05
PDLIM5-210ENST00000508216 PLPPR2Q96GM1 343 aa8.47□□□□□ -1.05
PDLIM5-210ENST00000508216 LYZL4Q96KX0 146 aa8.47□□□□□ -1.05
PDLIM5-210ENST00000508216 GPHA2Q96T91 129 aa8.47□□□□□ -1.05
PDLIM5-210ENST00000508216 Q9UFV3 132 aa8.47□□□□□ -1.05
PDLIM5-210ENST00000508216 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.46□□□□□ -1.05
PDLIM5-210ENST00000508216 PGPA6NDG6 321 aa8.46□□□□□ -1.05
PDLIM5-210ENST00000508216 EIF4EBP3O60516 100 aaPredicted RBP8.46□□□□□ -1.05
PDLIM5-210ENST00000508216 IFI27P40305 119 aaPredicted RBP8.46□□□□□ -1.05
PDLIM5-210ENST00000508216 PMAIP1Q13794 54 aa8.46□□□□□ -1.05
PDLIM5-210ENST00000508216 TTTY13Q9BZ97 58 aa8.46□□□□□ -1.05
PDLIM5-210ENST00000508216 ZNF442Q9H7R0 627 aa8.46□□□□□ -1.05
PDLIM5-210ENST00000508216 PLEKHA3Q9HB20 300 aa8.46□□□□□ -1.05
PDLIM5-210ENST00000508216 LAMTOR3Q9UHA4 124 aa8.46□□□□□ -1.05
PDLIM5-210ENST00000508216 HEATR1Q9H583 2144 aaKnown RBP8.46□□□□□ -1.06
PDLIM5-210ENST00000508216 COL5A1P20908 1838 aaPredicted RBP8.46□□□□□ -1.06
PDLIM5-210ENST00000508216 A0A1B0GUT8 65 aa8.45□□□□□ -1.06
PDLIM5-210ENST00000508216 SPINT2O43291 252 aa8.45□□□□□ -1.06
PDLIM5-210ENST00000508216 FCGR3BO75015 233 aa8.45□□□□□ -1.06
PDLIM5-210ENST00000508216 LEPP41159 167 aa8.45□□□□□ -1.06
PDLIM5-210ENST00000508216 CCL11P51671 97 aa8.45□□□□□ -1.06
PDLIM5-210ENST00000508216 ZNF816Q0VGE8 651 aaPredicted RBP8.45□□□□□ -1.06
PDLIM5-210ENST00000508216 FAM201AQ5SY85 155 aa8.45□□□□□ -1.06
PDLIM5-210ENST00000508216 IL17DQ8TAD2 202 aa8.45□□□□□ -1.06
PDLIM5-210ENST00000508216 METTL26Q96S19 204 aa8.45□□□□□ -1.06
PDLIM5-210ENST00000508216 AMMECR1Q9Y4X0 333 aaPredicted RBP8.45□□□□□ -1.06
PDLIM5-210ENST00000508216 TANC2Q9HCD6 1990 aa8.45□□□□□ -1.06
PDLIM5-210ENST00000508216 TRGV5A0A0B4J1U4 118 aa8.45□□□□□ -1.06
PDLIM5-210ENST00000508216 TEX49A0A1B0GTD5 131 aa8.45□□□□□ -1.06
PDLIM5-210ENST00000508216 P01737 135 aa8.45□□□□□ -1.06
PDLIM5-210ENST00000508216 DAZAP2Q15038 168 aaPredicted RBP8.45□□□□□ -1.06
PDLIM5-210ENST00000508216 STHQ8IWL8 128 aa8.45□□□□□ -1.06
PDLIM5-210ENST00000508216 INS-IGF2F8WCM5 200 aa8.44□□□□□ -1.06
PDLIM5-210ENST00000508216 K7EMI3 77 aa8.44□□□□□ -1.06
PDLIM5-210ENST00000508216 ZNF883P0CG24 379 aa8.44□□□□□ -1.06
PDLIM5-210ENST00000508216 FCER1GP30273 86 aa8.44□□□□□ -1.06
PDLIM5-210ENST00000508216 RPL18AQ02543 176 aaKnown RBP8.44□□□□□ -1.06
PDLIM5-210ENST00000508216 ZNF497Q6ZNH5 498 aa8.44□□□□□ -1.06
PDLIM5-210ENST00000508216 RAI1Q7Z5J4 1906 aaPredicted RBP8.44□□□□□ -1.06
PDLIM5-210ENST00000508216 CCL16O15467 120 aa8.43□□□□□ -1.06
PDLIM5-210ENST00000508216 CXCL13O43927 109 aa8.43□□□□□ -1.06
PDLIM5-210ENST00000508216 CDSNQ15517 529 aa8.43□□□□□ -1.06
PDLIM5-210ENST00000508216 PIGYQ3MUY2 71 aa8.43□□□□□ -1.06
PDLIM5-210ENST00000508216 RSPO2Q6UXX9 243 aaPredicted RBP8.43□□□□□ -1.06
PDLIM5-210ENST00000508216 Q6ZRU5 148 aa8.43□□□□□ -1.06
PDLIM5-210ENST00000508216 MIR17HGQ75NE6 70 aa8.43□□□□□ -1.06
PDLIM5-210ENST00000508216 LINC00596Q86U02 117 aa8.43□□□□□ -1.06
PDLIM5-210ENST00000508216 GTSCR1Q86UQ5 136 aa8.43□□□□□ -1.06
PDLIM5-210ENST00000508216 C1orf159Q96HA4 380 aa8.43□□□□□ -1.06
PDLIM5-210ENST00000508216 PGLYRP4Q96LB8 373 aa8.43□□□□□ -1.06
PDLIM5-210ENST00000508216 RTL8AQ9BWD3 113 aa8.43□□□□□ -1.06
PDLIM5-210ENST00000508216 PRO1854Q9UHT4 67 aa8.43□□□□□ -1.06
PDLIM5-210ENST00000508216 RPUSD1Q9UJJ7 312 aaKnown RBP8.43□□□□□ -1.06
PDLIM5-210ENST00000508216 TRBV6-1A0A0K0K1D8 114 aa8.43□□□□□ -1.06
PDLIM5-210ENST00000508216 M0R135 149 aa8.43□□□□□ -1.06
PDLIM5-210ENST00000508216 LINC00271P0C7V0 271 aa8.43□□□□□ -1.06
PDLIM5-210ENST00000508216 GFERP55789 205 aa8.43□□□□□ -1.06
PDLIM5-210ENST00000508216 SRSF9Q13242 221 aaKnown RBP eCLIP8.43□□□□□ -1.06
PDLIM5-210ENST00000508216 ORMDL3Q8N138 153 aa8.43□□□□□ -1.06
PDLIM5-210ENST00000508216 LINC01561Q8N1V8 128 aa8.43□□□□□ -1.06
PDLIM5-210ENST00000508216 Q8N8P6 123 aa8.43□□□□□ -1.06
PDLIM5-210ENST00000508216 CYSTM1Q9H1C7 97 aa8.43□□□□□ -1.06
PDLIM5-210ENST00000508216 COL4A6Q14031 1691 aa8.42□□□□□ -1.06
PDLIM5-210ENST00000508216 IGKV1-12A0A0C4DH73 117 aa8.42□□□□□ -1.06
PDLIM5-210ENST00000508216 IGKV1D-12P01611 117 aa8.42□□□□□ -1.06
PDLIM5-210ENST00000508216 IGHG2P01859 326 aa8.42□□□□□ -1.06
PDLIM5-210ENST00000508216 CD24P25063 80 aa8.42□□□□□ -1.06
PDLIM5-210ENST00000508216 ASPHD1Q5U4P2 390 aa8.42□□□□□ -1.06
PDLIM5-210ENST00000508216 ARHGEF17Q96PE2 2063 aaPredicted RBP8.42□□□□□ -1.06
PDLIM5-210ENST00000508216 CEP192Q8TEP8 1941 aa8.42□□□□□ -1.06
PDLIM5-210ENST00000508216 MYO7BQ6PIF6 2116 aa8.41□□□□□ -1.06
PDLIM5-210ENST00000508216 IGKV1D-43A0A0B4J1Z2 117 aa8.41□□□□□ -1.06
PDLIM5-210ENST00000508216 TRAV12-1A0A0B4J245 112 aa8.41□□□□□ -1.06
PDLIM5-210ENST00000508216 A0A0B4J2C4 111 aa8.41□□□□□ -1.06
PDLIM5-210ENST00000508216 ZNF137PP52743 207 aa8.41□□□□□ -1.06
PDLIM5-210ENST00000508216 HERVK_113P61574 105 aa8.41□□□□□ -1.06
PDLIM5-210ENST00000508216 FAM104BQ5XKR9 115 aa8.41□□□□□ -1.06
PDLIM5-210ENST00000508216 VN1R4Q7Z5H5 301 aa8.41□□□□□ -1.06
PDLIM5-210ENST00000508216 ZNF329Q86UD4 541 aa8.41□□□□□ -1.06
PDLIM5-210ENST00000508216 MDP1Q86V88 176 aa8.41□□□□□ -1.06
PDLIM5-210ENST00000508216 FMC1Q96HJ9 113 aa8.41□□□□□ -1.06
PDLIM5-210ENST00000508216 RETNQ9HD89 108 aa8.41□□□□□ -1.06
PDLIM5-210ENST00000508216 TIMM8BQ9Y5J9 83 aaPredicted RBP8.41□□□□□ -1.06
PDLIM5-210ENST00000508216 EML6Q6ZMW3 1958 aa8.41□□□□□ -1.06
PDLIM5-210ENST00000508216 IGKV1-27A0A075B6S5 117 aa8.4□□□□□ -1.06
PDLIM5-210ENST00000508216 TRGV8A0A0C4DH27 118 aa8.4□□□□□ -1.06
PDLIM5-210ENST00000508216 ADORA2A-AS1P86434 159 aa8.4□□□□□ -1.06
PDLIM5-210ENST00000508216 EIF4EBP1Q13541 118 aaPredicted RBP8.4□□□□□ -1.06
PDLIM5-210ENST00000508216 TSACCQ96A04 125 aaPredicted RBP8.4□□□□□ -1.06
PDLIM5-210ENST00000508216 BORCS8Q96FH0 119 aa8.4□□□□□ -1.06
PDLIM5-210ENST00000508216 C16orf92Q96LL3 132 aa8.4□□□□□ -1.06
PDLIM5-210ENST00000508216 NABP2Q9BQ15 211 aa8.4□□□□□ -1.06
PDLIM5-210ENST00000508216 DYNLRB1Q9NP97 96 aa8.4□□□□□ -1.06
PDLIM5-210ENST00000508216 PEMTQ9UBM1 199 aa8.4□□□□□ -1.06
PDLIM5-210ENST00000508216 DYSFO75923 2080 aa8.4□□□□□ -1.06
PDLIM5-210ENST00000508216 TRBV30A0A0K0K1B3 111 aa8.4□□□□□ -1.07
PDLIM5-210ENST00000508216 C17orf100A8MU93 164 aa8.4□□□□□ -1.07
PDLIM5-210ENST00000508216 PF4P02776 101 aa8.4□□□□□ -1.07
PDLIM5-210ENST00000508216 ITLN1Q8WWA0 313 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 150.4 ms