RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 LEAP2Q969E1 77 aa5.53□□□□□ -1.52
CLCN3-206ENST00000507875 C17orf77Q96MU5 243 aa5.53□□□□□ -1.52
CLCN3-206ENST00000507875 OR4C12Q96R67 309 aa5.53□□□□□ -1.52
CLCN3-206ENST00000507875 MRPL20Q9BYC9 149 aaKnown RBP5.53□□□□□ -1.52
CLCN3-206ENST00000507875 LAMTOR2Q9Y2Q5 125 aa5.53□□□□□ -1.52
CLCN3-206ENST00000507875 PRRC2AP48634 2157 aaKnown RBP5.53□□□□□ -1.52
CLCN3-206ENST00000507875 MED13LQ71F56 2210 aa5.53□□□□□ -1.52
CLCN3-206ENST00000507875 AKAP6Q13023 2319 aa5.53□□□□□ -1.52
CLCN3-206ENST00000507875 IGHV1-3A0A0C4DH29 117 aa5.53□□□□□ -1.52
CLCN3-206ENST00000507875 LINC01548A6NM66 108 aa5.53□□□□□ -1.52
CLCN3-206ENST00000507875 TOMM40O96008 361 aa5.53□□□□□ -1.52
CLCN3-206ENST00000507875 RPL24P83731 157 aaKnown RBP5.53□□□□□ -1.52
CLCN3-206ENST00000507875 EBI3Q14213 229 aa5.53□□□□□ -1.52
CLCN3-206ENST00000507875 TMEM167AQ8TBQ9 72 aa5.53□□□□□ -1.52
CLCN3-206ENST00000507875 TAF15Q92804 592 aaKnown RBP eCLIP5.53□□□□□ -1.52
CLCN3-206ENST00000507875 CLCC1Q96S66 551 aa5.53□□□□□ -1.52
CLCN3-206ENST00000507875 TBX15Q96SF7 602 aa5.53□□□□□ -1.52
CLCN3-206ENST00000507875 NRN1Q9NPD7 142 aa5.53□□□□□ -1.52
CLCN3-206ENST00000507875 SMCO4Q9NRQ5 59 aa5.53□□□□□ -1.52
CLCN3-206ENST00000507875 RPRMQ9NS64 109 aa5.53□□□□□ -1.52
CLCN3-206ENST00000507875 TEP1Q99973 2627 aaKnown RBP5.53□□□□□ -1.52
CLCN3-206ENST00000507875 ROS1P08922 2347 aa5.52□□□□□ -1.53
CLCN3-206ENST00000507875 UBE2L5PA0A1B0GUS4 154 aa5.52□□□□□ -1.53
CLCN3-206ENST00000507875 GAGE12JA6NER3 117 aa5.52□□□□□ -1.53
CLCN3-206ENST00000507875 PMS2P5A8MQ11 134 aa5.52□□□□□ -1.53
CLCN3-206ENST00000507875 UPK2O00526 184 aa5.52□□□□□ -1.53
CLCN3-206ENST00000507875 IGHV3-7P01780 117 aa5.52□□□□□ -1.53
CLCN3-206ENST00000507875 OR9G9P0C7N8 305 aa5.52□□□□□ -1.53
CLCN3-206ENST00000507875 BATFQ16520 125 aa5.52□□□□□ -1.53
CLCN3-206ENST00000507875 PRSS8Q16651 343 aa5.52□□□□□ -1.53
CLCN3-206ENST00000507875 ZNF506Q5JVG8 444 aa5.52□□□□□ -1.53
CLCN3-206ENST00000507875 LCNL1Q6ZST4 164 aa5.52□□□□□ -1.53
CLCN3-206ENST00000507875 SLC35E3Q7Z769 313 aa5.52□□□□□ -1.53
CLCN3-206ENST00000507875 OR10P1Q8NGE3 313 aa5.52□□□□□ -1.53
CLCN3-206ENST00000507875 VSIRQ9H7M9 311 aa5.52□□□□□ -1.53
CLCN3-206ENST00000507875 RPS10P5Q9NQ39 176 aa5.52□□□□□ -1.53
CLCN3-206ENST00000507875 KLF12Q9Y4X4 402 aa5.52□□□□□ -1.53
CLCN3-206ENST00000507875 TIMM9Q9Y5J7 89 aa5.52□□□□□ -1.53
CLCN3-206ENST00000507875 A0A0G2JLM5 398 aa5.52□□□□□ -1.53
CLCN3-206ENST00000507875 C7orf77A4D0Y5 90 aa5.52□□□□□ -1.53
CLCN3-206ENST00000507875 C15orf61A6NNL5 157 aa5.52□□□□□ -1.53
CLCN3-206ENST00000507875 COLCA2A8K830 154 aa5.52□□□□□ -1.53
CLCN3-206ENST00000507875 CEBPZOSA8MTT3 80 aa5.52□□□□□ -1.53
CLCN3-206ENST00000507875 HSPB1P04792 205 aaKnown RBP5.52□□□□□ -1.53
CLCN3-206ENST00000507875 GALR1P47211 349 aa5.52□□□□□ -1.53
CLCN3-206ENST00000507875 HILS1P60008 231 aa5.52□□□□□ -1.53
CLCN3-206ENST00000507875 ZNF664Q8N3J9 261 aa5.52□□□□□ -1.53
CLCN3-206ENST00000507875 MBD3L1Q8WWY6 194 aa5.52□□□□□ -1.53
CLCN3-206ENST00000507875 UBE2E2Q96LR5 201 aa5.52□□□□□ -1.53
CLCN3-206ENST00000507875 OVOL2Q9BRP0 275 aa5.52□□□□□ -1.53
CLCN3-206ENST00000507875 FBXL15Q9H469 300 aa5.52□□□□□ -1.53
CLCN3-206ENST00000507875 MAP1AP78559 2803 aaPredicted RBP5.51□□□□□ -1.53
CLCN3-206ENST00000507875 MALRD1Q5VYJ5 2156 aa5.51□□□□□ -1.53
CLCN3-206ENST00000507875 IGHV1-69DA0A0B4J2H0 117 aa5.51□□□□□ -1.53
CLCN3-206ENST00000507875 K7EMT4 169 aa5.51□□□□□ -1.53
CLCN3-206ENST00000507875 NPFFO15130 113 aa5.51□□□□□ -1.53
CLCN3-206ENST00000507875 IGHV1-69P01742 117 aa5.51□□□□□ -1.53
CLCN3-206ENST00000507875 SRP19P09132 144 aaKnown RBP5.51□□□□□ -1.53
CLCN3-206ENST00000507875 COX7A1P24310 79 aa5.51□□□□□ -1.53
CLCN3-206ENST00000507875 TFPI2P48307 235 aa5.51□□□□□ -1.53
CLCN3-206ENST00000507875 CD164Q04900 197 aa5.51□□□□□ -1.53
CLCN3-206ENST00000507875 RHEBQ15382 184 aa5.51□□□□□ -1.53
CLCN3-206ENST00000507875 ZNF726P1Q15940 193 aa5.51□□□□□ -1.53
CLCN3-206ENST00000507875 KRTAP21-3Q3LHN1 58 aa5.51□□□□□ -1.53
CLCN3-206ENST00000507875 KHDC3LQ587J8 217 aa5.51□□□□□ -1.53
CLCN3-206ENST00000507875 FAM231DQ6ZW35 169 aa5.51□□□□□ -1.53
CLCN3-206ENST00000507875 C15orf54Q8N8G6 183 aa5.51□□□□□ -1.53
CLCN3-206ENST00000507875 NPBQ8NG41 125 aa5.51□□□□□ -1.53
CLCN3-206ENST00000507875 OR2T10Q8NGZ9 312 aa5.51□□□□□ -1.53
CLCN3-206ENST00000507875 RXFP4Q8TDU9 374 aa5.51□□□□□ -1.53
CLCN3-206ENST00000507875 ZC2HC1AQ96GY0 325 aa5.51□□□□□ -1.53
CLCN3-206ENST00000507875 TMEM147Q9BVK8 224 aa5.51□□□□□ -1.53
CLCN3-206ENST00000507875 TUBA4BQ9H853 241 aa5.51□□□□□ -1.53
CLCN3-206ENST00000507875 TMEM14BQ9NUH8 114 aa5.51□□□□□ -1.53
CLCN3-206ENST00000507875 CR1P17927 2039 aa5.51□□□□□ -1.53
CLCN3-206ENST00000507875 TET2Q6N021 2002 aaPredicted RBP5.51□□□□□ -1.53
CLCN3-206ENST00000507875 KBTBD11O94819 623 aa5.51□□□□□ -1.53
CLCN3-206ENST00000507875 S100A2P29034 98 aa5.51□□□□□ -1.53
CLCN3-206ENST00000507875 HOXD3P31249 432 aaPredicted RBP5.51□□□□□ -1.53
CLCN3-206ENST00000507875 HSPE1P61604 102 aaKnown RBP5.51□□□□□ -1.53
CLCN3-206ENST00000507875 TIGITQ495A1 244 aa5.51□□□□□ -1.53
CLCN3-206ENST00000507875 SPINK9Q5DT21 86 aa5.51□□□□□ -1.53
CLCN3-206ENST00000507875 LCN15Q6UWW0 184 aa5.51□□□□□ -1.53
CLCN3-206ENST00000507875 KRTAP1-3Q8IUG1 177 aa5.51□□□□□ -1.53
CLCN3-206ENST00000507875 VKORC1L1Q8N0U8 176 aa5.51□□□□□ -1.53
CLCN3-206ENST00000507875 ZNF502Q8TBZ5 544 aa5.51□□□□□ -1.53
CLCN3-206ENST00000507875 FAM218AQ96MZ4 157 aa5.51□□□□□ -1.53
CLCN3-206ENST00000507875 GPR82Q96P67 336 aa5.51□□□□□ -1.53
CLCN3-206ENST00000507875 A0A087WZ39 114 aa5.5□□□□□ -1.53
CLCN3-206ENST00000507875 IGLV5-52A0A0A0MRZ9 124 aa5.5□□□□□ -1.53
CLCN3-206ENST00000507875 PHOX2AO14813 284 aa5.5□□□□□ -1.53
CLCN3-206ENST00000507875 MOSP00540 346 aa5.5□□□□□ -1.53
CLCN3-206ENST00000507875 PFN1P07737 140 aaKnown RBP5.5□□□□□ -1.53
CLCN3-206ENST00000507875 COL5A1-AS1Q5SY13 56 aa5.5□□□□□ -1.53
CLCN3-206ENST00000507875 FA2HQ7L5A8 372 aa5.5□□□□□ -1.53
CLCN3-206ENST00000507875 CYB561D1Q8N8Q1 229 aa5.5□□□□□ -1.53
CLCN3-206ENST00000507875 ZNF114Q8NC26 417 aa5.5□□□□□ -1.53
CLCN3-206ENST00000507875 C2orf48Q96LS8 159 aa5.5□□□□□ -1.53
CLCN3-206ENST00000507875 GNG13Q9P2W3 67 aa5.5□□□□□ -1.53
CLCN3-206ENST00000507875 IGLV9-49A0A0B4J1Y8 123 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms