RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 IL22RA2Q969J5 263 aa3.93□□□□□ -1.78
GYPB-208ENST00000507009 VSIG2Q96IQ7 327 aa3.93□□□□□ -1.78
GYPB-208ENST00000507009 SHANK2-AS3Q9BTD1 123 aa3.93□□□□□ -1.78
GYPB-208ENST00000507009 GSN-AS1Q9NRJ2 163 aa3.93□□□□□ -1.78
GYPB-208ENST00000507009 SHPKQ9UHJ6 478 aa3.93□□□□□ -1.78
GYPB-208ENST00000507009 SLC45A2Q9UMX9 530 aa3.93□□□□□ -1.78
GYPB-208ENST00000507009 ICOSQ9Y6W8 199 aa3.93□□□□□ -1.78
GYPB-208ENST00000507009 UBR4Q5T4S7 5183 aa3.93□□□□□ -1.78
GYPB-208ENST00000507009 A0A087WXM4 84 aa3.92□□□□□ -1.78
GYPB-208ENST00000507009 IGLV5-52A0A0A0MRZ9 124 aa3.92□□□□□ -1.78
GYPB-208ENST00000507009 PMS2P5A8MQ11 134 aa3.92□□□□□ -1.78
GYPB-208ENST00000507009 PRAC2D3DTV9 90 aa3.92□□□□□ -1.78
GYPB-208ENST00000507009 PSCAO43653 123 aa3.92□□□□□ -1.78
GYPB-208ENST00000507009 LINC00869P0C866 280 aa3.92□□□□□ -1.78
GYPB-208ENST00000507009 ATP5IP56385 69 aaPredicted RBP3.92□□□□□ -1.78
GYPB-208ENST00000507009 RPP30P78346 268 aaKnown RBP3.92□□□□□ -1.78
GYPB-208ENST00000507009 IL18Q14116 193 aa3.92□□□□□ -1.78
GYPB-208ENST00000507009 SURF2Q15527 256 aaPredicted RBP3.92□□□□□ -1.78
GYPB-208ENST00000507009 NFE4Q86UQ8 179 aa3.92□□□□□ -1.78
GYPB-208ENST00000507009 CLRN3Q8NCR9 226 aa3.92□□□□□ -1.78
GYPB-208ENST00000507009 PRRT1Q99946 306 aa3.92□□□□□ -1.78
GYPB-208ENST00000507009 NAA50Q9GZZ1 169 aaKnown RBP3.92□□□□□ -1.78
GYPB-208ENST00000507009 ARL6Q9H0F7 186 aa3.92□□□□□ -1.78
GYPB-208ENST00000507009 FUT9Q9Y231 359 aa3.92□□□□□ -1.78
GYPB-208ENST00000507009 TRAV9-2A0A087WT02 112 aa3.91□□□□□ -1.78
GYPB-208ENST00000507009 LINC00854A0A1B0GVQ3 168 aa3.91□□□□□ -1.78
GYPB-208ENST00000507009 E5RGE8 158 aa3.91□□□□□ -1.78
GYPB-208ENST00000507009 H3BNG1 76 aa3.91□□□□□ -1.78
GYPB-208ENST00000507009 SLC17A3O00476 420 aa3.91□□□□□ -1.78
GYPB-208ENST00000507009 SYNGR2O43760 224 aa3.91□□□□□ -1.78
GYPB-208ENST00000507009 PRAF2O60831 178 aa3.91□□□□□ -1.78
GYPB-208ENST00000507009 MED6O75586 246 aa3.91□□□□□ -1.78
GYPB-208ENST00000507009 HOXB5P09067 269 aa3.91□□□□□ -1.78
GYPB-208ENST00000507009 LEPP41159 167 aa3.91□□□□□ -1.78
GYPB-208ENST00000507009 SRPXP78539 464 aa3.91□□□□□ -1.78
GYPB-208ENST00000507009 ZNF415Q09FC8 603 aa3.91□□□□□ -1.78
GYPB-208ENST00000507009 ERCC8Q13216 396 aa3.91□□□□□ -1.78
GYPB-208ENST00000507009 WFDC10BQ8IUB3 73 aa3.91□□□□□ -1.78
GYPB-208ENST00000507009 LINC00612Q8N6U2 182 aa3.91□□□□□ -1.78
GYPB-208ENST00000507009 C15orf40Q8WUR7 153 aa3.91□□□□□ -1.78
GYPB-208ENST00000507009 C8orf49Q96NF6 230 aa3.91□□□□□ -1.78
GYPB-208ENST00000507009 CIB3Q96Q77 187 aaPredicted RBP3.91□□□□□ -1.78
GYPB-208ENST00000507009 MIXL1Q9H2W2 232 aa3.91□□□□□ -1.78
GYPB-208ENST00000507009 MRPL16Q9NX20 251 aaKnown RBP3.91□□□□□ -1.78
GYPB-208ENST00000507009 MSRB1Q9NZV6 116 aa3.91□□□□□ -1.78
GYPB-208ENST00000507009 SCP2D1Q9UJQ7 156 aa3.91□□□□□ -1.78
GYPB-208ENST00000507009 STRAPQ9Y3F4 350 aaKnown RBP3.91□□□□□ -1.78
GYPB-208ENST00000507009 KLF12Q9Y4X4 402 aa3.91□□□□□ -1.78
GYPB-208ENST00000507009 LY96Q9Y6Y9 160 aa3.91□□□□□ -1.78
GYPB-208ENST00000507009 A0A087X0K7 114 aa3.9□□□□□ -1.79
GYPB-208ENST00000507009 TRGV4A0A0C4DH28 118 aa3.9□□□□□ -1.79
GYPB-208ENST00000507009 PRSS46E5RG02 174 aa3.9□□□□□ -1.79
GYPB-208ENST00000507009 CTDSP2O14595 271 aa3.9□□□□□ -1.79
GYPB-208ENST00000507009 CCNKO75909 580 aa3.9□□□□□ -1.79
GYPB-208ENST00000507009 CT45A10P0DMU9 189 aa3.9□□□□□ -1.79
GYPB-208ENST00000507009 EVI2AP22794 236 aa3.9□□□□□ -1.79
GYPB-208ENST00000507009 RNASE4P34096 147 aaKnown RBP3.9□□□□□ -1.79
GYPB-208ENST00000507009 SLC38A11Q08AI6 406 aa3.9□□□□□ -1.79
GYPB-208ENST00000507009 DAZ2Q13117 558 aaKnown RBP3.9□□□□□ -1.79
GYPB-208ENST00000507009 BTN1A1Q13410 526 aa3.9□□□□□ -1.79
GYPB-208ENST00000507009 LYPD5Q6UWN5 251 aa3.9□□□□□ -1.79
GYPB-208ENST00000507009 LCN15Q6UWW0 184 aa3.9□□□□□ -1.79
GYPB-208ENST00000507009 S100A7AQ86SG5 101 aa3.9□□□□□ -1.79
GYPB-208ENST00000507009 ZBTB8BQ8NAP8 495 aaPredicted RBP3.9□□□□□ -1.79
GYPB-208ENST00000507009 SMIM4Q8WVI0 70 aa3.9□□□□□ -1.79
GYPB-208ENST00000507009 SCGB3A2Q96PL1 93 aa3.9□□□□□ -1.79
GYPB-208ENST00000507009 C20orf144Q9BQM9 153 aa3.9□□□□□ -1.79
GYPB-208ENST00000507009 PYGO2Q9BRQ0 406 aa3.9□□□□□ -1.79
GYPB-208ENST00000507009 LINC00467Q9BRT7 94 aa3.9□□□□□ -1.79
GYPB-208ENST00000507009 ARV1Q9H2C2 271 aa3.9□□□□□ -1.79
GYPB-208ENST00000507009 Q9HAA7 133 aa3.9□□□□□ -1.79
GYPB-208ENST00000507009 ZNF331Q9NQX6 463 aaPredicted RBP3.9□□□□□ -1.79
GYPB-208ENST00000507009 PSENENQ9NZ42 101 aa3.9□□□□□ -1.79
GYPB-208ENST00000507009 CCDC59Q9P031 241 aaKnown RBP3.9□□□□□ -1.79
GYPB-208ENST00000507009 ANKRD20A5PA0PJZ0 165 aa3.89□□□□□ -1.79
GYPB-208ENST00000507009 C7orf71A4D174 169 aa3.89□□□□□ -1.79
GYPB-208ENST00000507009 GOSR2O14653 212 aa3.89□□□□□ -1.79
GYPB-208ENST00000507009 SSSCA1O60232 199 aa3.89□□□□□ -1.79
GYPB-208ENST00000507009 COX7A2P2O60397 106 aa3.89□□□□□ -1.79
GYPB-208ENST00000507009 PITX3O75364 302 aa3.89□□□□□ -1.79
GYPB-208ENST00000507009 ZNF324O75467 553 aaPredicted RBP3.89□□□□□ -1.79
GYPB-208ENST00000507009 METTL15P1P0C7V9 234 aa3.89□□□□□ -1.79
GYPB-208ENST00000507009 SELENOTP62341 195 aa3.89□□□□□ -1.79
GYPB-208ENST00000507009 POLR2GP62487 172 aaKnown RBP eCLIP3.89□□□□□ -1.79
GYPB-208ENST00000507009 MRPS10P82664 201 aaKnown RBP3.89□□□□□ -1.79
GYPB-208ENST00000507009 SSBP1Q04837 148 aaKnown RBP3.89□□□□□ -1.79
GYPB-208ENST00000507009 MRPL23Q16540 153 aaKnown RBP3.89□□□□□ -1.79
GYPB-208ENST00000507009 PATE2Q6UY27 113 aa3.89□□□□□ -1.79
GYPB-208ENST00000507009 NEGR1Q7Z3B1 354 aa3.89□□□□□ -1.79
GYPB-208ENST00000507009 LINC00305Q7Z4B0 112 aa3.89□□□□□ -1.79
GYPB-208ENST00000507009 BPIFA4PQ86YQ2 179 aa3.89□□□□□ -1.79
GYPB-208ENST00000507009 ZNF431Q8TF32 576 aaPredicted RBP3.89□□□□□ -1.79
GYPB-208ENST00000507009 PCNPQ8WW12 178 aaKnown RBP3.89□□□□□ -1.79
GYPB-208ENST00000507009 DIRAS2Q96HU8 199 aa3.89□□□□□ -1.79
GYPB-208ENST00000507009 SLC50A1Q9BRV3 221 aa3.89□□□□□ -1.79
GYPB-208ENST00000507009 FAM30AQ9NZY2 134 aa3.89□□□□□ -1.79
GYPB-208ENST00000507009 MGAT4CQ9UBM8 478 aa3.89□□□□□ -1.79
GYPB-208ENST00000507009 PRO0255Q9UI72 69 aa3.89□□□□□ -1.79
GYPB-208ENST00000507009 TP53TG3Q9ULZ0 132 aa3.89□□□□□ -1.79
GYPB-208ENST00000507009 RABL2BQ9UNT1 228 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms