RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 GFI1BQ5VTD9 330 aa17.27■□□□□ 0.36
HERC4-212ENST00000505760 NRARPQ7Z6K4 114 aa17.27■□□□□ 0.36
HERC4-212ENST00000505760 C5orf51A6NDU8 294 aa17.26■□□□□ 0.35
HERC4-212ENST00000505760 H3BQ15 152 aa17.26■□□□□ 0.35
HERC4-212ENST00000505760 PLA2G10O15496 165 aa17.26■□□□□ 0.35
HERC4-212ENST00000505760 LYRM1O43325 122 aa17.26■□□□□ 0.35
HERC4-212ENST00000505760 CST7O76096 145 aa17.26■□□□□ 0.35
HERC4-212ENST00000505760 LINC00588Q9Y4M8 146 aa17.26■□□□□ 0.35
HERC4-212ENST00000505760 TRAV6A0A075B6T7 132 aa17.25■□□□□ 0.35
HERC4-212ENST00000505760 OR5I1Q13606 314 aa17.25■□□□□ 0.35
HERC4-212ENST00000505760 GUK1Q16774 197 aa17.25■□□□□ 0.35
HERC4-212ENST00000505760 MIC13Q5XKP0 118 aa17.25■□□□□ 0.35
HERC4-212ENST00000505760 C6orf223Q8N319 242 aa17.25■□□□□ 0.35
HERC4-212ENST00000505760 OR1L4Q8NGR5 311 aa17.25■□□□□ 0.35
HERC4-212ENST00000505760 UQCC1Q9NVA1 299 aa17.25■□□□□ 0.35
HERC4-212ENST00000505760 J3KRW8 73 aa17.24■□□□□ 0.35
HERC4-212ENST00000505760 TCRBP04435 133 aa17.24■□□□□ 0.35
HERC4-212ENST00000505760 PVALBP20472 110 aaPredicted RBP17.24■□□□□ 0.35
HERC4-212ENST00000505760 SAT2Q96F10 170 aaPredicted RBP17.24■□□□□ 0.35
HERC4-212ENST00000505760 PFDN5Q99471 154 aa17.24■□□□□ 0.35
HERC4-212ENST00000505760 TRAV5A0A0B4J249 113 aa17.23■□□□□ 0.35
HERC4-212ENST00000505760 FAM24AA6NFZ4 105 aa17.23■□□□□ 0.35
HERC4-212ENST00000505760 LEPP41159 167 aa17.23■□□□□ 0.35
HERC4-212ENST00000505760 TNP2Q05952 138 aa17.23■□□□□ 0.35
HERC4-212ENST00000505760 SSX7Q7RTT5 188 aa17.23■□□□□ 0.35
HERC4-212ENST00000505760 ZNF431Q8TF32 576 aaPredicted RBP17.23■□□□□ 0.35
HERC4-212ENST00000505760 GNPNAT1Q96EK6 184 aaPredicted RBP17.23■□□□□ 0.35
HERC4-212ENST00000505760 SEC22CQ9BRL7 303 aa17.23■□□□□ 0.35
HERC4-212ENST00000505760 NUDT15Q9NV35 164 aa17.23■□□□□ 0.35
HERC4-212ENST00000505760 WDR83OSQ9Y284 106 aa17.23■□□□□ 0.35
HERC4-212ENST00000505760 SNURFLB1AK76 121 aa17.22■□□□□ 0.35
HERC4-212ENST00000505760 RLN2P04090 185 aa17.22■□□□□ 0.35
HERC4-212ENST00000505760 TRAV26-1A0A087WT03 109 aa17.21■□□□□ 0.35
HERC4-212ENST00000505760 TRAV12-3A0A0B4J271 114 aa17.21■□□□□ 0.35
HERC4-212ENST00000505760 GAGE12BA1L429 117 aa17.21■□□□□ 0.35
HERC4-212ENST00000505760 GAGE7O76087 117 aa17.21■□□□□ 0.35
HERC4-212ENST00000505760 GAGE12FP0CL80 117 aa17.21■□□□□ 0.35
HERC4-212ENST00000505760 GAGE12GP0CL81 117 aa17.21■□□□□ 0.35
HERC4-212ENST00000505760 GAGE12IP0CL82 117 aa17.21■□□□□ 0.35
HERC4-212ENST00000505760 CT45A10P0DMU9 189 aa17.21■□□□□ 0.35
HERC4-212ENST00000505760 M6PRP20645 277 aa17.21■□□□□ 0.35
HERC4-212ENST00000505760 S100A10P60903 97 aa17.21■□□□□ 0.35
HERC4-212ENST00000505760 BAXQ07812 192 aa17.21■□□□□ 0.35
HERC4-212ENST00000505760 C12orf45Q8N5I9 185 aaPredicted RBP17.21■□□□□ 0.35
HERC4-212ENST00000505760 LINC00612Q8N6U2 182 aa17.21■□□□□ 0.35
HERC4-212ENST00000505760 C2orf50Q96LR7 162 aa17.21■□□□□ 0.35
HERC4-212ENST00000505760 ODF3Q96PU9 254 aa17.21■□□□□ 0.35
HERC4-212ENST00000505760 UBE2L5PA0A1B0GUS4 154 aa17.2■□□□□ 0.34
HERC4-212ENST00000505760 NPIPB6E9PJ23 425 aa17.2■□□□□ 0.34
HERC4-212ENST00000505760 SULT1A1P50225 295 aa17.2■□□□□ 0.34
HERC4-212ENST00000505760 C11orf1Q9H5F2 150 aa17.2■□□□□ 0.34
HERC4-212ENST00000505760 SLC39A9Q9NUM3 307 aa17.2■□□□□ 0.34
HERC4-212ENST00000505760 ZNF586Q9NXT0 402 aa17.2■□□□□ 0.34
HERC4-212ENST00000505760 S100A11P31949 105 aa17.19■□□□□ 0.34
HERC4-212ENST00000505760 RPL29P47914 159 aaKnown RBP17.19■□□□□ 0.34
HERC4-212ENST00000505760 VWC2Q2TAL6 325 aa17.19■□□□□ 0.34
HERC4-212ENST00000505760 STX12Q86Y82 276 aa17.19■□□□□ 0.34
HERC4-212ENST00000505760 RXFP4Q8TDU9 374 aa17.19■□□□□ 0.34
HERC4-212ENST00000505760 PYGO2Q9BRQ0 406 aa17.19■□□□□ 0.34
HERC4-212ENST00000505760 LYRM2Q9NU23 88 aaPredicted RBP17.19■□□□□ 0.34
HERC4-212ENST00000505760 A0A0J9YY99 117 aa17.18■□□□□ 0.34
HERC4-212ENST00000505760 C16orf90A8MZG2 172 aa17.18■□□□□ 0.34
HERC4-212ENST00000505760 ZNF253O75346 499 aa17.18■□□□□ 0.34
HERC4-212ENST00000505760 HBG1P69891 147 aa17.18■□□□□ 0.34
HERC4-212ENST00000505760 HBG2P69892 147 aa17.18■□□□□ 0.34
HERC4-212ENST00000505760 ZNF503Q96F45 646 aa17.18■□□□□ 0.34
HERC4-212ENST00000505760 Q9H8V8 135 aa17.18■□□□□ 0.34
HERC4-212ENST00000505760 HOXA5P20719 270 aa17.17■□□□□ 0.34
HERC4-212ENST00000505760 TRBV19A0A075B6N1 114 aa17.16■□□□□ 0.34
HERC4-212ENST00000505760 IGSF23A1L1A6 192 aa17.16■□□□□ 0.34
HERC4-212ENST00000505760 H2AFB2P0C5Z0 115 aa17.16■□□□□ 0.34
HERC4-212ENST00000505760 FGF7P21781 194 aa17.16■□□□□ 0.34
HERC4-212ENST00000505760 TMEM252Q8N6L7 170 aa17.16■□□□□ 0.34
HERC4-212ENST00000505760 MRPL53Q96EL3 112 aaKnown RBP17.16■□□□□ 0.34
HERC4-212ENST00000505760 ABCA13Q86UQ4 5058 aa17.15■□□□□ 0.34
HERC4-212ENST00000505760 M0R3E3 92 aa17.15■□□□□ 0.34
HERC4-212ENST00000505760 SLC25A5P05141 298 aaKnown RBP17.15■□□□□ 0.34
HERC4-212ENST00000505760 RAB32Q13637 225 aa17.15■□□□□ 0.34
HERC4-212ENST00000505760 TMEM14CQ9P0S9 112 aa17.15■□□□□ 0.34
HERC4-212ENST00000505760 TIMM9Q9Y5J7 89 aa17.15■□□□□ 0.34
HERC4-212ENST00000505760 DAZ2Q13117 558 aaKnown RBP17.14■□□□□ 0.33
HERC4-212ENST00000505760 ERCC8Q13216 396 aa17.14■□□□□ 0.33
HERC4-212ENST00000505760 ATP6V1FQ16864 119 aa17.14■□□□□ 0.33
HERC4-212ENST00000505760 TTC32Q5I0X7 151 aa17.14■□□□□ 0.33
HERC4-212ENST00000505760 Q6ZTI0 123 aa17.14■□□□□ 0.33
HERC4-212ENST00000505760 CHAC2Q8WUX2 184 aa17.14■□□□□ 0.33
HERC4-212ENST00000505760 TMPRSS5Q9H3S3 457 aa17.14■□□□□ 0.33
HERC4-212ENST00000505760 GPN1Q9HCN4 374 aaPredicted RBP17.14■□□□□ 0.33
HERC4-212ENST00000505760 HSPG2P98160 4391 aa17.14■□□□□ 0.33
HERC4-212ENST00000505760 C7orf71A4D174 169 aa17.13■□□□□ 0.33
HERC4-212ENST00000505760 H3BNG1 76 aa17.13■□□□□ 0.33
HERC4-212ENST00000505760 HIST1H1EP10412 219 aaKnown RBP17.13■□□□□ 0.33
HERC4-212ENST00000505760 PRELID1Q9Y255 219 aa17.13■□□□□ 0.33
HERC4-212ENST00000505760 FAM240BA0A1B0GVZ2 78 aa17.12■□□□□ 0.33
HERC4-212ENST00000505760 MPDU1O75352 247 aa17.12■□□□□ 0.33
HERC4-212ENST00000505760 IL15RAQ13261 267 aa17.12■□□□□ 0.33
HERC4-212ENST00000505760 PDE6HQ13956 83 aa17.12■□□□□ 0.33
HERC4-212ENST00000505760 ZNF680Q8NEM1 530 aa17.12■□□□□ 0.33
HERC4-212ENST00000505760 BLNKQ8WV28 456 aa17.12■□□□□ 0.33
HERC4-212ENST00000505760 CCDC32Q9BV29 185 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms