RNA–Protein interactions for RNA: ENST00000505625.5

MATR3-211, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 7,306 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-211ENST00000505625 HOXA6P31267 233 aa4.19□□□□□ -1.74
MATR3-211ENST00000505625 CFHR2P36980 270 aa4.19□□□□□ -1.74
MATR3-211ENST00000505625 HERV-K104P63124 156 aa4.19□□□□□ -1.74
MATR3-211ENST00000505625 PVRIGQ6DKI7 326 aa4.19□□□□□ -1.74
MATR3-211ENST00000505625 CD177Q8N6Q3 437 aa4.19□□□□□ -1.74
MATR3-211ENST00000505625 U3KQE9 123 aa4.19□□□□□ -1.74
MATR3-211ENST00000505625 IGLV3-16A0A075B6K0 115 aa4.19□□□□□ -1.74
MATR3-211ENST00000505625 A0A0A6YYD4 124 aa4.19□□□□□ -1.74
MATR3-211ENST00000505625 XGP55808 180 aa4.19□□□□□ -1.74
MATR3-211ENST00000505625 LAGE3Q14657 143 aa4.19□□□□□ -1.74
MATR3-211ENST00000505625 TMEM30BQ3MIR4 351 aa4.19□□□□□ -1.74
MATR3-211ENST00000505625 FAM90A1Q86YD7 464 aa4.19□□□□□ -1.74
MATR3-211ENST00000505625 ZNF479Q96JC4 524 aa4.19□□□□□ -1.74
MATR3-211ENST00000505625 C9orf85Q96MD7 179 aa4.19□□□□□ -1.74
MATR3-211ENST00000505625 RNASE7Q9H1E1 156 aaKnown RBP4.19□□□□□ -1.74
MATR3-211ENST00000505625 CABIN1Q9Y6J0 2220 aa4.19□□□□□ -1.74
MATR3-211ENST00000505625 IGKV1-12A0A0C4DH73 117 aa4.19□□□□□ -1.74
MATR3-211ENST00000505625 A0A0J9YWU9 116 aa4.19□□□□□ -1.74
MATR3-211ENST00000505625 A8MXK9 166 aa4.19□□□□□ -1.74
MATR3-211ENST00000505625 SMKR1H3BMG3 65 aa4.19□□□□□ -1.74
MATR3-211ENST00000505625 IGHV4-30-4P0DP06 118 aa4.19□□□□□ -1.74
MATR3-211ENST00000505625 IGHV4-31P0DP07 118 aa4.19□□□□□ -1.74
MATR3-211ENST00000505625 ZFP36L1Q07352 338 aaKnown RBP4.19□□□□□ -1.74
MATR3-211ENST00000505625 C5orf64Q2M2E5 130 aa4.19□□□□□ -1.74
MATR3-211ENST00000505625 SPCS1Q9Y6A9 102 aa4.19□□□□□ -1.74
MATR3-211ENST00000505625 SIPA1L1O43166 1804 aa4.19□□□□□ -1.74
MATR3-211ENST00000505625 RP1L1Q8IWN7 2480 aaPredicted RBP4.19□□□□□ -1.74
MATR3-211ENST00000505625 A0A1B0GUT8 65 aa4.19□□□□□ -1.74
MATR3-211ENST00000505625 LINC00587B1AMM8 73 aa4.19□□□□□ -1.74
MATR3-211ENST00000505625 EGR2P11161 476 aaPredicted RBP4.19□□□□□ -1.74
MATR3-211ENST00000505625 HOXB4P17483 251 aaPredicted RBP4.19□□□□□ -1.74
MATR3-211ENST00000505625 DPRXA6NFQ7 191 aa4.18□□□□□ -1.74
MATR3-211ENST00000505625 HIGD1CA8MV81 97 aa4.18□□□□□ -1.74
MATR3-211ENST00000505625 SPINK8P0C7L1 97 aa4.18□□□□□ -1.74
MATR3-211ENST00000505625 SPTA1P02549 2419 aa4.18□□□□□ -1.74
MATR3-211ENST00000505625 SHISA3A0PJX4 238 aa4.18□□□□□ -1.74
MATR3-211ENST00000505625 K7EM74 188 aa4.18□□□□□ -1.74
MATR3-211ENST00000505625 HIGD2BQ4VC39 106 aa4.18□□□□□ -1.74
MATR3-211ENST00000505625 AMTNQ6UX39 209 aa4.18□□□□□ -1.74
MATR3-211ENST00000505625 PLSCR4Q9NRQ2 329 aa4.18□□□□□ -1.74
MATR3-211ENST00000505625 MTFP1Q9UDX5 166 aa4.18□□□□□ -1.74
MATR3-211ENST00000505625 IGHV1-24A0A0C4DH33 117 aa4.18□□□□□ -1.74
MATR3-211ENST00000505625 UPK2O00526 184 aa4.18□□□□□ -1.74
MATR3-211ENST00000505625 SERF1AO75920 110 aa4.18□□□□□ -1.74
MATR3-211ENST00000505625 CD55P08174 381 aa4.18□□□□□ -1.74
MATR3-211ENST00000505625 HAMPP81172 84 aa4.18□□□□□ -1.74
MATR3-211ENST00000505625 LIME1Q9H400 295 aa4.18□□□□□ -1.74
MATR3-211ENST00000505625 SPTBN1Q01082 2364 aaKnown RBP4.18□□□□□ -1.74
MATR3-211ENST00000505625 PAQR4Q8N4S7 273 aaPredicted RBP4.18□□□□□ -1.74
MATR3-211ENST00000505625 PSG8Q9UQ74 426 aa4.18□□□□□ -1.74
MATR3-211ENST00000505625 PRSS46E5RG02 174 aa4.18□□□□□ -1.74
MATR3-211ENST00000505625 NGFRP08138 427 aa4.18□□□□□ -1.74
MATR3-211ENST00000505625 AWAT1Q58HT5 328 aa4.18□□□□□ -1.74
MATR3-211ENST00000505625 APCDD1LQ8NCL9 501 aa4.18□□□□□ -1.74
MATR3-211ENST00000505625 LCTP09848 1927 aa4.18□□□□□ -1.74
MATR3-211ENST00000505625 DEFB131BA0A096LNP1 70 aa4.18□□□□□ -1.74
MATR3-211ENST00000505625 A0A1W2PPI3 338 aa4.18□□□□□ -1.74
MATR3-211ENST00000505625 ATXN8Q156A1 80 aa4.18□□□□□ -1.74
MATR3-211ENST00000505625 KIR2DL5BQ8NHK3 375 aa4.18□□□□□ -1.74
MATR3-211ENST00000505625 MED12Q93074 2177 aa4.17□□□□□ -1.74
MATR3-211ENST00000505625 PRR20EP86478 221 aa4.17□□□□□ -1.74
MATR3-211ENST00000505625 PRR20CP86479 221 aa4.17□□□□□ -1.74
MATR3-211ENST00000505625 PRR20DP86480 221 aa4.17□□□□□ -1.74
MATR3-211ENST00000505625 PRR20BP86481 221 aa4.17□□□□□ -1.74
MATR3-211ENST00000505625 PRR20AP86496 221 aa4.17□□□□□ -1.74
MATR3-211ENST00000505625 MAJINQ3KP22 176 aa4.17□□□□□ -1.74
MATR3-211ENST00000505625 ZNF660Q6AZW8 331 aaPredicted RBP4.17□□□□□ -1.74
MATR3-211ENST00000505625 SAXO1Q8IYX7 474 aa4.17□□□□□ -1.74
MATR3-211ENST00000505625 FGFBP3Q8TAT2 258 aa4.17□□□□□ -1.74
MATR3-211ENST00000505625 PLPPR1Q8TBJ4 325 aa4.17□□□□□ -1.74
MATR3-211ENST00000505625 TINCRA0A1B0GVN0 87 aa4.17□□□□□ -1.74
MATR3-211ENST00000505625 A0A1B0GWB2 263 aa4.17□□□□□ -1.74
MATR3-211ENST00000505625 TRACP01848 142 aa4.17□□□□□ -1.74
MATR3-211ENST00000505625 ZNF138P52744 262 aa4.17□□□□□ -1.74
MATR3-211ENST00000505625 MRPL23Q16540 153 aaKnown RBP4.17□□□□□ -1.74
MATR3-211ENST00000505625 SMIM4Q8WVI0 70 aa4.17□□□□□ -1.74
MATR3-211ENST00000505625 AMELYQ99218 206 aa4.17□□□□□ -1.74
MATR3-211ENST00000505625 WFDC6Q9BQY6 131 aa4.17□□□□□ -1.74
MATR3-211ENST00000505625 TANC1Q9C0D5 1861 aa4.17□□□□□ -1.74
MATR3-211ENST00000505625 ZDBF2Q9HCK1 2354 aa4.17□□□□□ -1.74
MATR3-211ENST00000505625 HHLA3Q9XRX5 114 aa4.17□□□□□ -1.74
MATR3-211ENST00000505625 SH2D1AO60880 128 aa4.17□□□□□ -1.74
MATR3-211ENST00000505625 NDUFB1O75438 58 aa4.17□□□□□ -1.74
MATR3-211ENST00000505625 SHISA2Q6UWI4 295 aa4.17□□□□□ -1.74
MATR3-211ENST00000505625 C5orf38Q86SI9 138 aa4.17□□□□□ -1.74
MATR3-211ENST00000505625 GGNQ86UU5 652 aa4.17□□□□□ -1.74
MATR3-211ENST00000505625 STPG2Q8N412 459 aa4.17□□□□□ -1.74
MATR3-211ENST00000505625 GAFA1Q96PS6 74 aa4.17□□□□□ -1.74
MATR3-211ENST00000505625 TIMM21Q9BVV7 248 aa4.17□□□□□ -1.74
MATR3-211ENST00000505625 TMEM222Q9H0R3 208 aa4.17□□□□□ -1.74
MATR3-211ENST00000505625 C12orf73Q69YU5 71 aa4.17□□□□□ -1.74
MATR3-211ENST00000505625 CD200R1LQ6Q8B3 271 aa4.17□□□□□ -1.74
MATR3-211ENST00000505625 LINC00337Q8N6G1 96 aa4.17□□□□□ -1.74
MATR3-211ENST00000505625 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.17□□□□□ -1.74
MATR3-211ENST00000505625 GATAD1Q8WUU5 269 aa4.17□□□□□ -1.74
MATR3-211ENST00000505625 IL36BQ9NZH7 164 aa4.17□□□□□ -1.74
MATR3-211ENST00000505625 KLF2Q9Y5W3 355 aaPredicted RBP4.17□□□□□ -1.74
MATR3-211ENST00000505625 IGLV9-49A0A0B4J1Y8 123 aa4.17□□□□□ -1.74
MATR3-211ENST00000505625 IGHV4-61A0A0C4DH41 118 aa4.17□□□□□ -1.74
MATR3-211ENST00000505625 SIGLEC5O15389 551 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms