RNA–Protein interactions for RNA: ENST00000505066.5

DDR1-256, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 4

Gene DDR1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-256	ENST00000505066	RNF141	Q8WVD5	230 aa		11.5	□□□□□ -0.57
DDR1-256	ENST00000505066	ZNF503	Q96F45	646 aa		11.5	□□□□□ -0.57
DDR1-256	ENST00000505066	ODF3	Q96PU9	254 aa		11.5	□□□□□ -0.57
DDR1-256	ENST00000505066	MGST2	Q99735	147 aa		11.5	□□□□□ -0.57
DDR1-256	ENST00000505066	PRELID1	Q9Y255	219 aa		11.5	□□□□□ -0.57
DDR1-256	ENST00000505066	TRAV26-1	A0A087WT03	109 aa		11.49	□□□□□ -0.57
DDR1-256	ENST00000505066		H3BTX0	84 aa		11.49	□□□□□ -0.57
DDR1-256	ENST00000505066	CCS	O14618	274 aa		11.49	□□□□□ -0.57
DDR1-256	ENST00000505066	SULT1A1	P50225	295 aa		11.49	□□□□□ -0.57
DDR1-256	ENST00000505066	ATP6V1F	Q16864	119 aa		11.49	□□□□□ -0.57
DDR1-256	ENST00000505066	ZNF680	Q8NEM1	530 aa		11.49	□□□□□ -0.57
DDR1-256	ENST00000505066	ZNRF2	Q8NHG8	242 aa		11.49	□□□□□ -0.57
DDR1-256	ENST00000505066	RXFP4	Q8TDU9	374 aa		11.49	□□□□□ -0.57
DDR1-256	ENST00000505066	C2orf50	Q96LR7	162 aa		11.49	□□□□□ -0.57
DDR1-256	ENST00000505066	RBM38	Q9H0Z9	239 aa	Known RBP	11.49	□□□□□ -0.57
DDR1-256	ENST00000505066	NDUFA13	Q9P0J0	144 aa		11.49	□□□□□ -0.57
DDR1-256	ENST00000505066	DNAH10	Q8IVF4	4471 aa		11.49	□□□□□ -0.57
DDR1-256	ENST00000505066	TRAV6	A0A075B6T7	132 aa		11.48	□□□□□ -0.57
DDR1-256	ENST00000505066	TRAV12-3	A0A0B4J271	114 aa		11.48	□□□□□ -0.57
DDR1-256	ENST00000505066	MRPS12	O15235	138 aa	Known RBP	11.48	□□□□□ -0.57
DDR1-256	ENST00000505066	ZNF253	O75346	499 aa		11.48	□□□□□ -0.57
DDR1-256	ENST00000505066	MPDU1	O75352	247 aa		11.48	□□□□□ -0.57
DDR1-256	ENST00000505066	TCRB	P04435	133 aa		11.48	□□□□□ -0.57
DDR1-256	ENST00000505066	SLC25A5	P05141	298 aa	Known RBP	11.48	□□□□□ -0.57
DDR1-256	ENST00000505066	HIST1H1E	P10412	219 aa	Known RBP	11.48	□□□□□ -0.57
DDR1-256	ENST00000505066	RPL29	P47914	159 aa	Known RBP	11.48	□□□□□ -0.57
DDR1-256	ENST00000505066	GFI1B	Q5VTD9	330 aa		11.48	□□□□□ -0.57
DDR1-256	ENST00000505066	MIC13	Q5XKP0	118 aa		11.48	□□□□□ -0.57
DDR1-256	ENST00000505066	MZT2B	Q6NZ67	158 aa		11.48	□□□□□ -0.57
DDR1-256	ENST00000505066	TMEM37	Q8WXS4	190 aa		11.48	□□□□□ -0.57
DDR1-256	ENST00000505066		Q9H8V8	135 aa		11.48	□□□□□ -0.57
DDR1-256	ENST00000505066	SLC39A9	Q9NUM3	307 aa		11.48	□□□□□ -0.57
DDR1-256	ENST00000505066	NUDT15	Q9NV35	164 aa		11.48	□□□□□ -0.57
DDR1-256	ENST00000505066	HECTD4	Q9Y4D8	3996 aa		11.47	□□□□□ -0.57
DDR1-256	ENST00000505066		A0A0J9YY99	117 aa		11.47	□□□□□ -0.57
DDR1-256	ENST00000505066	UBE2L5P	A0A1B0GUS4	154 aa		11.47	□□□□□ -0.57
DDR1-256	ENST00000505066	PLAC8L1	A1L4L8	177 aa		11.47	□□□□□ -0.57
DDR1-256	ENST00000505066	IGLC2	P0DOY2	106 aa		11.47	□□□□□ -0.57
DDR1-256	ENST00000505066	ARL16	Q0P5N6	197 aa		11.47	□□□□□ -0.57
DDR1-256	ENST00000505066	MRPL53	Q96EL3	112 aa	Known RBP	11.47	□□□□□ -0.57
DDR1-256	ENST00000505066	LINC00477	Q96M19	166 aa		11.47	□□□□□ -0.57
DDR1-256	ENST00000505066	GPN1	Q9HCN4	374 aa	Predicted RBP	11.47	□□□□□ -0.57
DDR1-256	ENST00000505066	KCNIP2	Q9NS61	270 aa		11.47	□□□□□ -0.57
DDR1-256	ENST00000505066	WDR83OS	Q9Y284	106 aa		11.47	□□□□□ -0.57
DDR1-256	ENST00000505066	LINC00588	Q9Y4M8	146 aa		11.47	□□□□□ -0.57
DDR1-256	ENST00000505066	FAM240B	A0A1B0GVZ2	78 aa		11.46	□□□□□ -0.57
DDR1-256	ENST00000505066	FAM24A	A6NFZ4	105 aa		11.46	□□□□□ -0.57
DDR1-256	ENST00000505066		H3BNG1	76 aa		11.46	□□□□□ -0.57
DDR1-256	ENST00000505066	SLC17A3	O00476	420 aa		11.46	□□□□□ -0.57
DDR1-256	ENST00000505066	H2AFB2	P0C5Z0	115 aa		11.46	□□□□□ -0.57
DDR1-256	ENST00000505066	PRB4	P10163	310 aa	Predicted RBP	11.46	□□□□□ -0.57
DDR1-256	ENST00000505066	FGF7	P21781	194 aa		11.46	□□□□□ -0.57
DDR1-256	ENST00000505066	TMEM78	Q5T7P6	136 aa		11.46	□□□□□ -0.57
DDR1-256	ENST00000505066	ZNF575	Q86XF7	245 aa		11.46	□□□□□ -0.57
DDR1-256	ENST00000505066	LYRM2	Q9NU23	88 aa	Predicted RBP	11.46	□□□□□ -0.57
DDR1-256	ENST00000505066	VPS13D	Q5THJ4	4388 aa		11.46	□□□□□ -0.58
DDR1-256	ENST00000505066	HERC2	O95714	4834 aa		11.46	□□□□□ -0.58
DDR1-256	ENST00000505066	NPIPB6	E9PJ23	425 aa		11.45	□□□□□ -0.58
DDR1-256	ENST00000505066		H3BQ15	152 aa		11.45	□□□□□ -0.58
DDR1-256	ENST00000505066	GPX1	P07203	203 aa		11.45	□□□□□ -0.58
DDR1-256	ENST00000505066	BTC	P35070	178 aa		11.45	□□□□□ -0.58
DDR1-256	ENST00000505066	DAZ2	Q13117	558 aa	Known RBP	11.45	□□□□□ -0.58
DDR1-256	ENST00000505066	PDE6H	Q13956	83 aa		11.45	□□□□□ -0.58
DDR1-256	ENST00000505066	SLC25A31	Q9H0C2	315 aa		11.45	□□□□□ -0.58
DDR1-256	ENST00000505066	TRAV5	A0A0B4J249	113 aa		11.44	□□□□□ -0.58
DDR1-256	ENST00000505066	C7orf71	A4D174	169 aa		11.44	□□□□□ -0.58
DDR1-256	ENST00000505066	PRAC2	D3DTV9	90 aa		11.44	□□□□□ -0.58
DDR1-256	ENST00000505066	RGS13	O14921	159 aa		11.44	□□□□□ -0.58
DDR1-256	ENST00000505066	CT45A10	P0DMU9	189 aa		11.44	□□□□□ -0.58
DDR1-256	ENST00000505066	TNP2	Q05952	138 aa		11.44	□□□□□ -0.58
DDR1-256	ENST00000505066	BLNK	Q8WV28	456 aa		11.44	□□□□□ -0.58
DDR1-256	ENST00000505066	SAT2	Q96F10	170 aa	Predicted RBP	11.44	□□□□□ -0.58
DDR1-256	ENST00000505066	ARPC5L	Q9BPX5	153 aa		11.44	□□□□□ -0.58
DDR1-256	ENST00000505066	SEC22C	Q9BRL7	303 aa		11.44	□□□□□ -0.58
DDR1-256	ENST00000505066	CCDC32	Q9BV29	185 aa		11.44	□□□□□ -0.58
DDR1-256	ENST00000505066	PARD6G	Q9BYG4	376 aa	Predicted RBP	11.44	□□□□□ -0.58
DDR1-256	ENST00000505066	TMEM14C	Q9P0S9	112 aa		11.44	□□□□□ -0.58
DDR1-256	ENST00000505066	TRBV19	A0A075B6N1	114 aa		11.43	□□□□□ -0.58
DDR1-256	ENST00000505066	TRGV1	A0A0A0MS02	117 aa		11.43	□□□□□ -0.58
DDR1-256	ENST00000505066		A0A1W2PPQ1	181 aa		11.43	□□□□□ -0.58
DDR1-256	ENST00000505066	EREG	O14944	169 aa		11.43	□□□□□ -0.58
DDR1-256	ENST00000505066	BTF3	P20290	206 aa	Known RBP	11.43	□□□□□ -0.58
DDR1-256	ENST00000505066	RNASE4	P34096	147 aa	Known RBP	11.43	□□□□□ -0.58
DDR1-256	ENST00000505066	CSN1S1	P47710	185 aa		11.43	□□□□□ -0.58
DDR1-256	ENST00000505066	EIF4E3	Q8N5X7	224 aa	Known RBP	11.43	□□□□□ -0.58
DDR1-256	ENST00000505066	SDHC	Q99643	169 aa	Predicted RBP	11.43	□□□□□ -0.58
DDR1-256	ENST00000505066	DNAH6	Q9C0G6	4158 aa		11.43	□□□□□ -0.58
DDR1-256	ENST00000505066	C17orf112	F2Z3M2	114 aa		11.42	□□□□□ -0.58
DDR1-256	ENST00000505066	SLA	Q13239	276 aa		11.42	□□□□□ -0.58
DDR1-256	ENST00000505066	VWC2	Q2TAL6	325 aa		11.42	□□□□□ -0.58
DDR1-256	ENST00000505066	MORN5	Q5VZ52	161 aa		11.42	□□□□□ -0.58
DDR1-256	ENST00000505066	TMEM252	Q8N6L7	170 aa		11.42	□□□□□ -0.58
DDR1-256	ENST00000505066	CHAC2	Q8WUX2	184 aa		11.42	□□□□□ -0.58
DDR1-256	ENST00000505066	ZNF586	Q9NXT0	402 aa		11.42	□□□□□ -0.58
DDR1-256	ENST00000505066	PTTG2	Q9NZH5	202 aa		11.42	□□□□□ -0.58
DDR1-256	ENST00000505066	PLA2G10	O15496	165 aa		11.41	□□□□□ -0.58
DDR1-256	ENST00000505066	CYCS	P99999	105 aa	Known RBP	11.41	□□□□□ -0.58
DDR1-256	ENST00000505066	RAB32	Q13637	225 aa		11.41	□□□□□ -0.58
DDR1-256	ENST00000505066	LINC00612	Q8N6U2	182 aa		11.41	□□□□□ -0.58
DDR1-256	ENST00000505066	TMPRSS5	Q9H3S3	457 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms