RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 SOHLH1Q5JUK2 328 aa7.82□□□□□ -1.16
TPM3-217ENST00000504663 LINC00479Q96M42 142 aa7.82□□□□□ -1.16
TPM3-217ENST00000504663 NKX6-2Q9C056 277 aaPredicted RBP7.82□□□□□ -1.16
TPM3-217ENST00000504663 EPDR1Q9UM22 224 aa7.82□□□□□ -1.16
TPM3-217ENST00000504663 TRRAPQ9Y4A5 3859 aa7.82□□□□□ -1.16
TPM3-217ENST00000504663 PGPEP1LA6NFU8 196 aa7.81□□□□□ -1.16
TPM3-217ENST00000504663 ZNF785A8K8V0 405 aa7.81□□□□□ -1.16
TPM3-217ENST00000504663 C9JCJ5 164 aa7.81□□□□□ -1.16
TPM3-217ENST00000504663 PRAC2D3DTV9 90 aa7.81□□□□□ -1.16
TPM3-217ENST00000504663 ZNF561-AS1K7EIQ3 104 aa7.81□□□□□ -1.16
TPM3-217ENST00000504663 SLC25A5P05141 298 aaKnown RBP7.81□□□□□ -1.16
TPM3-217ENST00000504663 RPL35P42766 123 aaKnown RBP7.81□□□□□ -1.16
TPM3-217ENST00000504663 NSUN5P1Q3KNT7 163 aa7.81□□□□□ -1.16
TPM3-217ENST00000504663 TCF24Q7RTU0 167 aa7.81□□□□□ -1.16
TPM3-217ENST00000504663 FAM24BQ8N5W8 94 aa7.81□□□□□ -1.16
TPM3-217ENST00000504663 RNF182Q8N6D2 247 aa7.81□□□□□ -1.16
TPM3-217ENST00000504663 LINC00482Q8N8I6 264 aa7.81□□□□□ -1.16
TPM3-217ENST00000504663 DPF1Q92782 380 aa7.81□□□□□ -1.16
TPM3-217ENST00000504663 SLC50A1Q9BRV3 221 aa7.81□□□□□ -1.16
TPM3-217ENST00000504663 SDF2L1Q9HCN8 221 aa7.81□□□□□ -1.16
TPM3-217ENST00000504663 WNK1Q9H4A3 2382 aa7.81□□□□□ -1.16
TPM3-217ENST00000504663 TRBV6-1A0A0K0K1D8 114 aa7.8□□□□□ -1.16
TPM3-217ENST00000504663 ZNF705FA8MVS1 300 aaPredicted RBP7.8□□□□□ -1.16
TPM3-217ENST00000504663 DIRC3C9JPN6 131 aa7.8□□□□□ -1.16
TPM3-217ENST00000504663 K7EN84 100 aa7.8□□□□□ -1.16
TPM3-217ENST00000504663 ISLRO14498 428 aa7.8□□□□□ -1.16
TPM3-217ENST00000504663 APOC3P02656 99 aa7.8□□□□□ -1.16
TPM3-217ENST00000504663 MEOX2P50222 304 aa7.8□□□□□ -1.16
TPM3-217ENST00000504663 CEBPGP53567 150 aa7.8□□□□□ -1.16
TPM3-217ENST00000504663 RPL23P62829 140 aaKnown RBP7.8□□□□□ -1.16
TPM3-217ENST00000504663 PSG9Q00887 426 aa7.8□□□□□ -1.16
TPM3-217ENST00000504663 ARL6IP6Q8N6S5 226 aa7.8□□□□□ -1.16
TPM3-217ENST00000504663 HIST1H2BAQ96A08 127 aa7.8□□□□□ -1.16
TPM3-217ENST00000504663 GRAMD2BQ96HH9 432 aa7.8□□□□□ -1.16
TPM3-217ENST00000504663 SMIM7Q9BQ49 75 aa7.8□□□□□ -1.16
TPM3-217ENST00000504663 ATG101Q9BSB4 218 aa7.8□□□□□ -1.16
TPM3-217ENST00000504663 NRN1Q9NPD7 142 aa7.8□□□□□ -1.16
TPM3-217ENST00000504663 SIGLEC8Q9NYZ4 499 aa7.8□□□□□ -1.16
TPM3-217ENST00000504663 IGKV2-40A0A087WW87 121 aaPredicted RBP7.79□□□□□ -1.16
TPM3-217ENST00000504663 TRAV8-1A0A0A6YYK1 113 aa7.79□□□□□ -1.16
TPM3-217ENST00000504663 TRAV34A0A0B4J273 112 aa7.79□□□□□ -1.16
TPM3-217ENST00000504663 HELTA6NFD8 242 aa7.79□□□□□ -1.16
TPM3-217ENST00000504663 ZNF727A8MUV8 499 aa7.79□□□□□ -1.16
TPM3-217ENST00000504663 K7EQG2 157 aa7.79□□□□□ -1.16
TPM3-217ENST00000504663 OVOL1O14753 267 aa7.79□□□□□ -1.16
TPM3-217ENST00000504663 SCO1O75880 301 aa7.79□□□□□ -1.16
TPM3-217ENST00000504663 IGKV2D-40P01614 121 aaPredicted RBP7.79□□□□□ -1.16
TPM3-217ENST00000504663 SMCPP49901 116 aaPredicted RBP7.79□□□□□ -1.16
TPM3-217ENST00000504663 TMEM183BQ1AE95 376 aa7.79□□□□□ -1.16
TPM3-217ENST00000504663 ZNF674Q2M3X9 581 aa7.79□□□□□ -1.16
TPM3-217ENST00000504663 FAM74A3Q4VXF1 159 aa7.79□□□□□ -1.16
TPM3-217ENST00000504663 CENPWQ5EE01 88 aa7.79□□□□□ -1.16
TPM3-217ENST00000504663 Q86TA4 180 aa7.79□□□□□ -1.16
TPM3-217ENST00000504663 LINC01551Q86U37 167 aa7.79□□□□□ -1.16
TPM3-217ENST00000504663 MRPL53Q96EL3 112 aaKnown RBP7.79□□□□□ -1.16
TPM3-217ENST00000504663 MS4A6AQ9H2W1 248 aa7.79□□□□□ -1.16
TPM3-217ENST00000504663 PEMTQ9UBM1 199 aa7.79□□□□□ -1.16
TPM3-217ENST00000504663 NAT8Q9UHE5 227 aa7.79□□□□□ -1.16
TPM3-217ENST00000504663 IZUMO1RA6ND01 250 aa7.78□□□□□ -1.16
TPM3-217ENST00000504663 LTAP01374 205 aa7.78□□□□□ -1.16
TPM3-217ENST00000504663 AKR1C3P42330 323 aa7.78□□□□□ -1.16
TPM3-217ENST00000504663 TAS2R60P59551 318 aa7.78□□□□□ -1.16
TPM3-217ENST00000504663 DEFB1P60022 68 aa7.78□□□□□ -1.16
TPM3-217ENST00000504663 PSG3Q16557 428 aa7.78□□□□□ -1.16
TPM3-217ENST00000504663 DEFB114Q30KQ6 69 aa7.78□□□□□ -1.16
TPM3-217ENST00000504663 GOLT1AQ6ZVE7 132 aa7.78□□□□□ -1.16
TPM3-217ENST00000504663 TMEM61Q8N0U2 210 aa7.78□□□□□ -1.16
TPM3-217ENST00000504663 TMEM75Q8N9X5 138 aa7.78□□□□□ -1.16
TPM3-217ENST00000504663 TVP23CQ96ET8 276 aa7.78□□□□□ -1.16
TPM3-217ENST00000504663 ASCL2Q99929 193 aa7.78□□□□□ -1.16
TPM3-217ENST00000504663 MLST8Q9BVC4 326 aa7.78□□□□□ -1.16
TPM3-217ENST00000504663 RPH3ALQ9UNE2 315 aa7.78□□□□□ -1.16
TPM3-217ENST00000504663 LCN12Q6JVE5 192 aa7.77□□□□□ -1.17
TPM3-217ENST00000504663 SVBPQ8N300 66 aa7.77□□□□□ -1.17
TPM3-217ENST00000504663 OCC1Q8TAD7 63 aa7.77□□□□□ -1.17
TPM3-217ENST00000504663 ISOC2Q96AB3 205 aa7.77□□□□□ -1.17
TPM3-217ENST00000504663 SGK494Q96LW2 274 aa7.77□□□□□ -1.17
TPM3-217ENST00000504663 VGLL1Q99990 258 aa7.77□□□□□ -1.17
TPM3-217ENST00000504663 NIPSNAP3BQ9BS92 247 aa7.77□□□□□ -1.17
TPM3-217ENST00000504663 ZNF747Q9BV97 191 aa7.77□□□□□ -1.17
TPM3-217ENST00000504663 CDIP1Q9H305 208 aa7.77□□□□□ -1.17
TPM3-217ENST00000504663 PRELID1Q9Y255 219 aa7.77□□□□□ -1.17
TPM3-217ENST00000504663 LY96Q9Y6Y9 160 aa7.77□□□□□ -1.17
TPM3-217ENST00000504663 STAB1Q9NY15 2570 aa7.76□□□□□ -1.17
TPM3-217ENST00000504663 IGKV3-7A0A075B6H7 116 aa7.76□□□□□ -1.17
TPM3-217ENST00000504663 TRAV2A0A0B4J234 112 aa7.76□□□□□ -1.17
TPM3-217ENST00000504663 TSPAN4O14817 238 aa7.76□□□□□ -1.17
TPM3-217ENST00000504663 IGLV1-51P01701 117 aa7.76□□□□□ -1.17
TPM3-217ENST00000504663 BMI1P35226 326 aa7.76□□□□□ -1.17
TPM3-217ENST00000504663 CNN1P51911 297 aaKnown RBP7.76□□□□□ -1.17
TPM3-217ENST00000504663 TMEM241Q24JQ0 296 aa7.76□□□□□ -1.17
TPM3-217ENST00000504663 CD300EQ496F6 205 aaPredicted RBP7.76□□□□□ -1.17
TPM3-217ENST00000504663 CT83Q5H943 113 aa7.76□□□□□ -1.17
TPM3-217ENST00000504663 COX8CQ7Z4L0 72 aa7.76□□□□□ -1.17
TPM3-217ENST00000504663 GBGT1Q8N5D6 347 aa7.76□□□□□ -1.17
TPM3-217ENST00000504663 FMC1Q96HJ9 113 aa7.76□□□□□ -1.17
TPM3-217ENST00000504663 C16orf92Q96LL3 132 aa7.76□□□□□ -1.17
TPM3-217ENST00000504663 YPEL4Q96NS1 127 aa7.76□□□□□ -1.17
TPM3-217ENST00000504663 GPR61Q9BZJ8 451 aa7.76□□□□□ -1.17
TPM3-217ENST00000504663 AAMDCQ9H7C9 122 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms