RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 YTHDF2Q9Y5A9 579 aaKnown RBP10.21□□□□□ -0.77
HOXC9-202ENST00000504557 TMEM189A5PLL7 270 aa10.2□□□□□ -0.78
HOXC9-202ENST00000504557 LINC01587Q99440 93 aa10.2□□□□□ -0.78
HOXC9-202ENST00000504557 RNF126Q9BV68 326 aa10.2□□□□□ -0.78
HOXC9-202ENST00000504557 APLNQ9ULZ1 77 aa10.2□□□□□ -0.78
HOXC9-202ENST00000504557 TIMM9Q9Y5J7 89 aa10.2□□□□□ -0.78
HOXC9-202ENST00000504557 RPL12P30050 165 aaKnown RBP10.19□□□□□ -0.78
HOXC9-202ENST00000504557 LGALS9CQ6DKI2 356 aa10.19□□□□□ -0.78
HOXC9-202ENST00000504557 MIR17HGQ75NE6 70 aa10.19□□□□□ -0.78
HOXC9-202ENST00000504557 ATP5SQ99766 215 aa10.19□□□□□ -0.78
HOXC9-202ENST00000504557 NIPSNAP3BQ9BS92 247 aa10.19□□□□□ -0.78
HOXC9-202ENST00000504557 WDR61Q9GZS3 305 aaKnown RBP10.19□□□□□ -0.78
HOXC9-202ENST00000504557 DKK2Q9UBU2 259 aa10.19□□□□□ -0.78
HOXC9-202ENST00000504557 HSPB11Q9Y547 144 aa10.19□□□□□ -0.78
HOXC9-202ENST00000504557 C17orf112F2Z3M2 114 aa10.18□□□□□ -0.78
HOXC9-202ENST00000504557 KIR3DS1Q14943 382 aa10.18□□□□□ -0.78
HOXC9-202ENST00000504557 GUK1Q16774 197 aa10.18□□□□□ -0.78
HOXC9-202ENST00000504557 CHAC2Q8WUX2 184 aa10.18□□□□□ -0.78
HOXC9-202ENST00000504557 SAT2Q96F10 170 aaPredicted RBP10.18□□□□□ -0.78
HOXC9-202ENST00000504557 SLC25A2Q9BXI2 301 aa10.18□□□□□ -0.78
HOXC9-202ENST00000504557 TRBV19A0A075B6N1 114 aa10.17□□□□□ -0.78
HOXC9-202ENST00000504557 M0R3E3 92 aa10.17□□□□□ -0.78
HOXC9-202ENST00000504557 IFNA5P01569 189 aa10.17□□□□□ -0.78
HOXC9-202ENST00000504557 OR10J4P0C629 311 aa10.17□□□□□ -0.78
HOXC9-202ENST00000504557 AZU1P20160 251 aa10.17□□□□□ -0.78
HOXC9-202ENST00000504557 CDKN1BP46527 198 aa10.17□□□□□ -0.78
HOXC9-202ENST00000504557 DAD1P61803 113 aa10.17□□□□□ -0.78
HOXC9-202ENST00000504557 ERCC8Q13216 396 aa10.17□□□□□ -0.78
HOXC9-202ENST00000504557 FCN2Q15485 313 aa10.17□□□□□ -0.78
HOXC9-202ENST00000504557 EXOC3-AS1Q8N2X6 119 aa10.17□□□□□ -0.78
HOXC9-202ENST00000504557 SCGB1C1Q8TD33 95 aa10.17□□□□□ -0.78
HOXC9-202ENST00000504557 KCNIP2Q9NS61 270 aa10.17□□□□□ -0.78
HOXC9-202ENST00000504557 EIF3GO75821 320 aaKnown RBP eCLIP10.16□□□□□ -0.78
HOXC9-202ENST00000504557 PTTG1O95997 202 aa10.16□□□□□ -0.78
HOXC9-202ENST00000504557 DEFB130BP0DP73 79 aa10.16□□□□□ -0.78
HOXC9-202ENST00000504557 DEFB130AP0DP74 79 aa10.16□□□□□ -0.78
HOXC9-202ENST00000504557 HIST1H1EP10412 219 aaKnown RBP10.16□□□□□ -0.78
HOXC9-202ENST00000504557 FFAR4Q5NUL3 377 aa10.16□□□□□ -0.78
HOXC9-202ENST00000504557 FAM122CQ6P4D5 195 aa10.16□□□□□ -0.78
HOXC9-202ENST00000504557 MED28Q9H204 178 aa10.16□□□□□ -0.78
HOXC9-202ENST00000504557 TMEM14CQ9P0S9 112 aa10.16□□□□□ -0.78
HOXC9-202ENST00000504557 TEX48A0A1B0GUV7 120 aa10.15□□□□□ -0.78
HOXC9-202ENST00000504557 OR7C2O60412 319 aa10.15□□□□□ -0.78
HOXC9-202ENST00000504557 NDUFB4O95168 129 aa10.15□□□□□ -0.78
HOXC9-202ENST00000504557 TSPOP30536 169 aa10.15□□□□□ -0.78
HOXC9-202ENST00000504557 TCTAP57738 103 aa10.15□□□□□ -0.78
HOXC9-202ENST00000504557 ICAM4Q14773 271 aa10.15□□□□□ -0.78
HOXC9-202ENST00000504557 LCE2DQ5TA82 110 aaPredicted RBP10.15□□□□□ -0.78
HOXC9-202ENST00000504557 NDUFAF3Q9BU61 184 aa10.15□□□□□ -0.78
HOXC9-202ENST00000504557 PAXXQ9BUH6 204 aa10.15□□□□□ -0.78
HOXC9-202ENST00000504557 OR51M1Q9H341 326 aa10.15□□□□□ -0.78
HOXC9-202ENST00000504557 AAMDCQ9H7C9 122 aa10.15□□□□□ -0.78
HOXC9-202ENST00000504557 CT45A10P0DMU9 189 aa10.14□□□□□ -0.79
HOXC9-202ENST00000504557 GFI1BQ5VTD9 330 aa10.14□□□□□ -0.79
HOXC9-202ENST00000504557 TMEM256Q8N2U0 113 aa10.14□□□□□ -0.79
HOXC9-202ENST00000504557 FAM167A-AS1Q96KT0 104 aa10.14□□□□□ -0.79
HOXC9-202ENST00000504557 MRPL32Q9BYC8 188 aaKnown RBP10.14□□□□□ -0.79
HOXC9-202ENST00000504557 WFDC1Q9HC57 220 aa10.14□□□□□ -0.79
HOXC9-202ENST00000504557 FUT9Q9Y231 359 aa10.14□□□□□ -0.79
HOXC9-202ENST00000504557 IGKV2-40A0A087WW87 121 aaPredicted RBP10.13□□□□□ -0.79
HOXC9-202ENST00000504557 TRAV12-3A0A0B4J271 114 aa10.13□□□□□ -0.79
HOXC9-202ENST00000504557 ZNF253O75346 499 aa10.13□□□□□ -0.79
HOXC9-202ENST00000504557 IGKV2D-40P01614 121 aaPredicted RBP10.13□□□□□ -0.79
HOXC9-202ENST00000504557 NBEAP1P0C6P0 100 aa10.13□□□□□ -0.79
HOXC9-202ENST00000504557 LEPP41159 167 aa10.13□□□□□ -0.79
HOXC9-202ENST00000504557 TAS2R60P59551 318 aa10.13□□□□□ -0.79
HOXC9-202ENST00000504557 NPIPB6E9PJ23 425 aa10.12□□□□□ -0.79
HOXC9-202ENST00000504557 UBE2L3P68036 154 aaKnown RBP10.12□□□□□ -0.79
HOXC9-202ENST00000504557 PDE6HQ13956 83 aa10.12□□□□□ -0.79
HOXC9-202ENST00000504557 RNF141Q8WVD5 230 aa10.12□□□□□ -0.79
HOXC9-202ENST00000504557 FXYD5Q96DB9 178 aa10.12□□□□□ -0.79
HOXC9-202ENST00000504557 PHYHIPLQ96FC7 376 aa10.12□□□□□ -0.79
HOXC9-202ENST00000504557 C16orf74Q96GX8 76 aa10.12□□□□□ -0.79
HOXC9-202ENST00000504557 KMT2AQ03164 3969 aa10.11□□□□□ -0.79
HOXC9-202ENST00000504557 PLAC8L1A1L4L8 177 aa10.11□□□□□ -0.79
HOXC9-202ENST00000504557 H7BYZ3 331 aa10.11□□□□□ -0.79
HOXC9-202ENST00000504557 RANP62826 216 aaKnown RBP10.11□□□□□ -0.79
HOXC9-202ENST00000504557 UBE2DNLQ8IWF7 75 aa10.11□□□□□ -0.79
HOXC9-202ENST00000504557 MRPL53Q96EL3 112 aaKnown RBP10.11□□□□□ -0.79
HOXC9-202ENST00000504557 NOP10Q9NPE3 64 aaKnown RBP10.11□□□□□ -0.79
HOXC9-202ENST00000504557 RPH3ALQ9UNE2 315 aa10.11□□□□□ -0.79
HOXC9-202ENST00000504557 PRELID1Q9Y255 219 aa10.11□□□□□ -0.79
HOXC9-202ENST00000504557 EPPK1P58107 5090 aaKnown RBP10.11□□□□□ -0.79
HOXC9-202ENST00000504557 LYRM9A8MSI8 78 aa10.1□□□□□ -0.79
HOXC9-202ENST00000504557 F5H768 121 aa10.1□□□□□ -0.79
HOXC9-202ENST00000504557 HMGB3O15347 200 aaKnown RBP10.1□□□□□ -0.79
HOXC9-202ENST00000504557 RNASE4P34096 147 aaKnown RBP10.1□□□□□ -0.79
HOXC9-202ENST00000504557 RAB2AP61019 212 aa10.1□□□□□ -0.79
HOXC9-202ENST00000504557 BTN1A1Q13410 526 aa10.1□□□□□ -0.79
HOXC9-202ENST00000504557 KHDC3LQ587J8 217 aa10.1□□□□□ -0.79
HOXC9-202ENST00000504557 Q5BKY6 102 aa10.1□□□□□ -0.79
HOXC9-202ENST00000504557 TMEM88Q6PEY1 159 aa10.1□□□□□ -0.79
HOXC9-202ENST00000504557 CCDC28AQ8IWP9 274 aa10.1□□□□□ -0.79
HOXC9-202ENST00000504557 HSD17B11Q8NBQ5 300 aa10.1□□□□□ -0.79
HOXC9-202ENST00000504557 VGLL1Q99990 258 aa10.1□□□□□ -0.79
HOXC9-202ENST00000504557 AGPAT4-IT1Q9H0P7 198 aa10.1□□□□□ -0.79
HOXC9-202ENST00000504557 TIMM8BQ9Y5J9 83 aaPredicted RBP10.1□□□□□ -0.79
HOXC9-202ENST00000504557 A0A1W2PPV4 95 aa10.09□□□□□ -0.79
HOXC9-202ENST00000504557 TAS2R45P59539 299 aa10.09□□□□□ -0.79
HOXC9-202ENST00000504557 CD300CQ08708 224 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms