RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 PSG9Q00887 426 aa8.76□□□□□ -1.01
PDLIM5-208ENST00000504489 GDF5OSQ5U4N7 250 aa8.76□□□□□ -1.01
PDLIM5-208ENST00000504489 RNF182Q8N6D2 247 aa8.76□□□□□ -1.01
PDLIM5-208ENST00000504489 BLNKQ8WV28 456 aa8.76□□□□□ -1.01
PDLIM5-208ENST00000504489 CLUHP3Q96NS8 147 aa8.76□□□□□ -1.01
PDLIM5-208ENST00000504489 TM2D3Q9BRN9 247 aa8.76□□□□□ -1.01
PDLIM5-208ENST00000504489 MRPL18Q9H0U6 180 aaKnown RBP8.76□□□□□ -1.01
PDLIM5-208ENST00000504489 NBEAL2Q6ZNJ1 2754 aa8.76□□□□□ -1.01
PDLIM5-208ENST00000504489 A0A0J9YX75 114 aa8.75□□□□□ -1.01
PDLIM5-208ENST00000504489 CTXND1A0A1B0GTU2 59 aa8.75□□□□□ -1.01
PDLIM5-208ENST00000504489 UMAD1C9J7I0 102 aa8.75□□□□□ -1.01
PDLIM5-208ENST00000504489 DEFB1P60022 68 aa8.75□□□□□ -1.01
PDLIM5-208ENST00000504489 UBE2L3P68036 154 aaKnown RBP8.75□□□□□ -1.01
PDLIM5-208ENST00000504489 EBLN2Q6P2I7 272 aa8.75□□□□□ -1.01
PDLIM5-208ENST00000504489 SLC51BQ86UW2 128 aa8.75□□□□□ -1.01
PDLIM5-208ENST00000504489 ZNF738Q8NE65 137 aa8.75□□□□□ -1.01
PDLIM5-208ENST00000504489 CSTL1Q9H114 145 aa8.75□□□□□ -1.01
PDLIM5-208ENST00000504489 PRELID1Q9Y255 219 aa8.75□□□□□ -1.01
PDLIM5-208ENST00000504489 TENM3Q9P273 2699 aa8.74□□□□□ -1.01
PDLIM5-208ENST00000504489 A8MTW9 85 aa8.74□□□□□ -1.01
PDLIM5-208ENST00000504489 F6UB75 175 aa8.74□□□□□ -1.01
PDLIM5-208ENST00000504489 HMGB3O15347 200 aaKnown RBP8.74□□□□□ -1.01
PDLIM5-208ENST00000504489 EIF3GO75821 320 aaKnown RBP eCLIP8.74□□□□□ -1.01
PDLIM5-208ENST00000504489 CXorf1O96002 111 aa8.74□□□□□ -1.01
PDLIM5-208ENST00000504489 ARL14EPLP0DKL9 152 aa8.74□□□□□ -1.01
PDLIM5-208ENST00000504489 ZNF726P1Q15940 193 aa8.74□□□□□ -1.01
PDLIM5-208ENST00000504489 EIF5AL1Q6IS14 154 aaKnown RBP8.74□□□□□ -1.01
PDLIM5-208ENST00000504489 MORN3Q6PF18 240 aaPredicted RBP8.74□□□□□ -1.01
PDLIM5-208ENST00000504489 LYPD1Q8N2G4 141 aa8.74□□□□□ -1.01
PDLIM5-208ENST00000504489 SUN5Q8TC36 379 aa8.74□□□□□ -1.01
PDLIM5-208ENST00000504489 RPUSD4Q96CM3 377 aaKnown RBP8.74□□□□□ -1.01
PDLIM5-208ENST00000504489 MRPL53Q96EL3 112 aaKnown RBP8.74□□□□□ -1.01
PDLIM5-208ENST00000504489 ZMAT4Q9H898 229 aa8.74□□□□□ -1.01
PDLIM5-208ENST00000504489 DUSP14O95147 198 aaKnown RBP8.73□□□□□ -1.01
PDLIM5-208ENST00000504489 GCHFRP30047 84 aa8.73□□□□□ -1.01
PDLIM5-208ENST00000504489 DPPA3Q6W0C5 159 aa8.73□□□□□ -1.01
PDLIM5-208ENST00000504489 Q6ZWC4 215 aa8.73□□□□□ -1.01
PDLIM5-208ENST00000504489 SSX7Q7RTT5 188 aa8.73□□□□□ -1.01
PDLIM5-208ENST00000504489 OR8A1Q8NGG7 326 aa8.73□□□□□ -1.01
PDLIM5-208ENST00000504489 TMED6Q8WW62 240 aa8.73□□□□□ -1.01
PDLIM5-208ENST00000504489 PHYHIPLQ96FC7 376 aa8.73□□□□□ -1.01
PDLIM5-208ENST00000504489 SPATA25Q9BR10 227 aa8.73□□□□□ -1.01
PDLIM5-208ENST00000504489 AAMDCQ9H7C9 122 aa8.73□□□□□ -1.01
PDLIM5-208ENST00000504489 ZNF705FA8MVS1 300 aaPredicted RBP8.72□□□□□ -1.01
PDLIM5-208ENST00000504489 GIG44P09565 113 aaPredicted RBP8.72□□□□□ -1.01
PDLIM5-208ENST00000504489 NKX2-5P52952 324 aaPredicted RBP8.72□□□□□ -1.01
PDLIM5-208ENST00000504489 NUTF2P61970 127 aaKnown RBP8.72□□□□□ -1.01
PDLIM5-208ENST00000504489 ICAM4Q14773 271 aa8.72□□□□□ -1.01
PDLIM5-208ENST00000504489 EXOC3-AS1Q8N2X6 119 aa8.72□□□□□ -1.01
PDLIM5-208ENST00000504489 OR4B1Q8NGF8 309 aa8.72□□□□□ -1.01
PDLIM5-208ENST00000504489 TMEM167BQ9NRX6 74 aa8.72□□□□□ -1.01
PDLIM5-208ENST00000504489 TP53TG1Q9Y2A0 90 aa8.72□□□□□ -1.01
PDLIM5-208ENST00000504489 HUWE1Q7Z6Z7 4374 aaKnown RBP8.71□□□□□ -1.01
PDLIM5-208ENST00000504489 M0R3E3 92 aa8.71□□□□□ -1.02
PDLIM5-208ENST00000504489 CA1P00915 261 aaPredicted RBP8.71□□□□□ -1.02
PDLIM5-208ENST00000504489 RAB5CP51148 216 aa8.71□□□□□ -1.02
PDLIM5-208ENST00000504489 CNN1P51911 297 aaKnown RBP8.71□□□□□ -1.02
PDLIM5-208ENST00000504489 RANP62826 216 aaKnown RBP8.71□□□□□ -1.02
PDLIM5-208ENST00000504489 AMTNQ6UX39 209 aa8.71□□□□□ -1.02
PDLIM5-208ENST00000504489 MBD3L1Q8WWY6 194 aa8.71□□□□□ -1.02
PDLIM5-208ENST00000504489 C1QTNF4Q9BXJ3 329 aa8.71□□□□□ -1.02
PDLIM5-208ENST00000504489 Q9H3A6 140 aa8.71□□□□□ -1.02
PDLIM5-208ENST00000504489 MAP1LC3B2A6NCE7 125 aa8.7□□□□□ -1.02
PDLIM5-208ENST00000504489 PRAC2D3DTV9 90 aa8.7□□□□□ -1.02
PDLIM5-208ENST00000504489 IGKV3-20P01619 116 aa8.7□□□□□ -1.02
PDLIM5-208ENST00000504489 ZNF705DP0CH99 300 aaPredicted RBP8.7□□□□□ -1.02
PDLIM5-208ENST00000504489 ZNF705BP0CI00 300 aaPredicted RBP8.7□□□□□ -1.02
PDLIM5-208ENST00000504489 FHITP49789 147 aa8.7□□□□□ -1.02
PDLIM5-208ENST00000504489 SULT1A2P50226 295 aa8.7□□□□□ -1.02
PDLIM5-208ENST00000504489 HIST1H1AQ02539 215 aaPredicted RBP8.7□□□□□ -1.02
PDLIM5-208ENST00000504489 DEFB135Q30KP9 77 aa8.7□□□□□ -1.02
PDLIM5-208ENST00000504489 FAM74A1Q5RGS3 127 aa8.7□□□□□ -1.02
PDLIM5-208ENST00000504489 ARL6IP6Q8N6S5 226 aa8.7□□□□□ -1.02
PDLIM5-208ENST00000504489 OR10J6PQ8NGY7 276 aa8.7□□□□□ -1.02
PDLIM5-208ENST00000504489 FAM213BQ8TBF2 198 aa8.7□□□□□ -1.02
PDLIM5-208ENST00000504489 RNF183Q96D59 192 aa8.7□□□□□ -1.02
PDLIM5-208ENST00000504489 OVOL2Q9BRP0 275 aa8.7□□□□□ -1.02
PDLIM5-208ENST00000504489 MAP1LC3BQ9GZQ8 125 aa8.7□□□□□ -1.02
PDLIM5-208ENST00000504489 OTORQ9NRC9 128 aa8.7□□□□□ -1.02
PDLIM5-208ENST00000504489 U3KQK5 164 aa8.7□□□□□ -1.02
PDLIM5-208ENST00000504489 PGPA6NDG6 321 aa8.69□□□□□ -1.02
PDLIM5-208ENST00000504489 NPIPB6E9PJ23 425 aa8.69□□□□□ -1.02
PDLIM5-208ENST00000504489 SPRY2O43597 315 aa8.69□□□□□ -1.02
PDLIM5-208ENST00000504489 AMBPP02760 352 aa8.69□□□□□ -1.02
PDLIM5-208ENST00000504489 CSN1S1P47710 185 aa8.69□□□□□ -1.02
PDLIM5-208ENST00000504489 CSNK1G2-AS1Q8NCQ2 148 aa8.69□□□□□ -1.02
PDLIM5-208ENST00000504489 RXFP4Q8TDU9 374 aa8.69□□□□□ -1.02
PDLIM5-208ENST00000504489 RCHY1Q96PM5 261 aa8.69□□□□□ -1.02
PDLIM5-208ENST00000504489 RETNQ9HD89 108 aa8.69□□□□□ -1.02
PDLIM5-208ENST00000504489 A0A1W2PRE2 83 aa8.68□□□□□ -1.02
PDLIM5-208ENST00000504489 PRB4P10163 310 aaPredicted RBP8.68□□□□□ -1.02
PDLIM5-208ENST00000504489 FGF8P55075 233 aaPredicted RBP8.68□□□□□ -1.02
PDLIM5-208ENST00000504489 C9orf47Q6ZRZ4 202 aa8.68□□□□□ -1.02
PDLIM5-208ENST00000504489 IQCF2Q8IXL9 164 aa8.68□□□□□ -1.02
PDLIM5-208ENST00000504489 SFT2D1Q8WV19 159 aa8.68□□□□□ -1.02
PDLIM5-208ENST00000504489 LINC00477Q96M19 166 aa8.68□□□□□ -1.02
PDLIM5-208ENST00000504489 ODF3Q96PU9 254 aa8.68□□□□□ -1.02
PDLIM5-208ENST00000504489 SLC35B3Q9H1N7 401 aa8.68□□□□□ -1.02
PDLIM5-208ENST00000504489 TMPRSS5Q9H3S3 457 aa8.68□□□□□ -1.02
PDLIM5-208ENST00000504489 XCL2Q9UBD3 114 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms