RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 H3BT86 120 aa1.95□□□□□ -2.1
TRAPPC13-205ENST00000504243 YPEL1O60688 119 aa1.95□□□□□ -2.1
TRAPPC13-205ENST00000504243 TNFP01375 233 aa1.95□□□□□ -2.1
TRAPPC13-205ENST00000504243 UBE2BP63146 152 aa1.95□□□□□ -2.1
TRAPPC13-205ENST00000504243 RPL18Q07020 188 aaKnown RBP1.95□□□□□ -2.1
TRAPPC13-205ENST00000504243 KISS1Q15726 138 aa1.95□□□□□ -2.1
TRAPPC13-205ENST00000504243 CCSMST1Q4G0I0 132 aa1.95□□□□□ -2.1
TRAPPC13-205ENST00000504243 LINC01545Q5VT33 79 aa1.95□□□□□ -2.1
TRAPPC13-205ENST00000504243 LYZL1Q6UWQ5 148 aa1.95□□□□□ -2.1
TRAPPC13-205ENST00000504243 LCN15Q6UWW0 184 aa1.95□□□□□ -2.1
TRAPPC13-205ENST00000504243 GKN2Q86XP6 184 aa1.95□□□□□ -2.1
TRAPPC13-205ENST00000504243 C4orf33Q8N1A6 199 aa1.95□□□□□ -2.1
TRAPPC13-205ENST00000504243 SVBPQ8N300 66 aa1.95□□□□□ -2.1
TRAPPC13-205ENST00000504243 C9orf62Q8N4C0 152 aa1.95□□□□□ -2.1
TRAPPC13-205ENST00000504243 KCNRGQ8N5I3 272 aa1.95□□□□□ -2.1
TRAPPC13-205ENST00000504243 RAB37Q96AX2 223 aa1.95□□□□□ -2.1
TRAPPC13-205ENST00000504243 SNRNP25Q9BV90 132 aaKnown RBP1.95□□□□□ -2.1
TRAPPC13-205ENST00000504243 SNHG12Q9BXW3 62 aa1.95□□□□□ -2.1
TRAPPC13-205ENST00000504243 TMEM133Q9H2Q1 129 aa1.95□□□□□ -2.1
TRAPPC13-205ENST00000504243 BANF2Q9H503 90 aa1.95□□□□□ -2.1
TRAPPC13-205ENST00000504243 NAA60Q9H7X0 242 aa1.95□□□□□ -2.1
TRAPPC13-205ENST00000504243 RPRMQ9NS64 109 aa1.95□□□□□ -2.1
TRAPPC13-205ENST00000504243 MAPKBP1O60336 1514 aa1.95□□□□□ -2.1
TRAPPC13-205ENST00000504243 TOPBP1Q92547 1522 aa1.95□□□□□ -2.1
TRAPPC13-205ENST00000504243 NCKAP5O14513 1909 aa1.95□□□□□ -2.1
TRAPPC13-205ENST00000504243 KTN1Q86UP2 1357 aaKnown RBP1.95□□□□□ -2.1
TRAPPC13-205ENST00000504243 ABCC10Q5T3U5 1492 aa1.94□□□□□ -2.1
TRAPPC13-205ENST00000504243 ARHGAP31Q2M1Z3 1444 aa1.94□□□□□ -2.1
TRAPPC13-205ENST00000504243 MYH7P12883 1935 aa1.94□□□□□ -2.1
TRAPPC13-205ENST00000504243 IGHV3-64A0A075B6Q5 118 aa1.94□□□□□ -2.1
TRAPPC13-205ENST00000504243 TRAV27A0A087WT01 109 aa1.94□□□□□ -2.1
TRAPPC13-205ENST00000504243 A0A0J9YW62 118 aa1.94□□□□□ -2.1
TRAPPC13-205ENST00000504243 C7orf71A4D174 169 aa1.94□□□□□ -2.1
TRAPPC13-205ENST00000504243 UQCRQO14949 82 aa1.94□□□□□ -2.1
TRAPPC13-205ENST00000504243 HIST1H2BKO60814 126 aa1.94□□□□□ -2.1
TRAPPC13-205ENST00000504243 NAPSAO96009 420 aa1.94□□□□□ -2.1
TRAPPC13-205ENST00000504243 IGHV3-7P01780 117 aa1.94□□□□□ -2.1
TRAPPC13-205ENST00000504243 PMP2P02689 132 aa1.94□□□□□ -2.1
TRAPPC13-205ENST00000504243 C1QAP02745 245 aa1.94□□□□□ -2.1
TRAPPC13-205ENST00000504243 HIST1H2BJP06899 126 aa1.94□□□□□ -2.1
TRAPPC13-205ENST00000504243 CD14P08571 375 aa1.94□□□□□ -2.1
TRAPPC13-205ENST00000504243 LINC00032P0C843 101 aa1.94□□□□□ -2.1
TRAPPC13-205ENST00000504243 PYYP10082 97 aa1.94□□□□□ -2.1
TRAPPC13-205ENST00000504243 BRS3P32247 399 aa1.94□□□□□ -2.1
TRAPPC13-205ENST00000504243 S100A10P60903 97 aa1.94□□□□□ -2.1
TRAPPC13-205ENST00000504243 HBBP68871 147 aa1.94□□□□□ -2.1
TRAPPC13-205ENST00000504243 QRFPP83859 136 aa1.94□□□□□ -2.1
TRAPPC13-205ENST00000504243 TPRXLQ17RH7 258 aa1.94□□□□□ -2.1
TRAPPC13-205ENST00000504243 Q5XG85 94 aa1.94□□□□□ -2.1
TRAPPC13-205ENST00000504243 EIF5AL1Q6IS14 154 aaKnown RBP1.94□□□□□ -2.1
TRAPPC13-205ENST00000504243 IZUMO2Q6UXV1 221 aa1.94□□□□□ -2.1
TRAPPC13-205ENST00000504243 OR8D4Q8NGM9 314 aa1.94□□□□□ -2.1
TRAPPC13-205ENST00000504243 BRK1Q8WUW1 75 aa1.94□□□□□ -2.1
TRAPPC13-205ENST00000504243 LCN9Q8WX39 176 aa1.94□□□□□ -2.1
TRAPPC13-205ENST00000504243 CARD19Q96LW7 228 aa1.94□□□□□ -2.1
TRAPPC13-205ENST00000504243 ZNF714Q96N38 554 aa1.94□□□□□ -2.1
TRAPPC13-205ENST00000504243 CIB3Q96Q77 187 aaPredicted RBP1.94□□□□□ -2.1
TRAPPC13-205ENST00000504243 MRPL32Q9BYC8 188 aaKnown RBP1.94□□□□□ -2.1
TRAPPC13-205ENST00000504243 NCAPD3P42695 1498 aa1.94□□□□□ -2.1
TRAPPC13-205ENST00000504243 TRANK1O15050 2925 aa1.94□□□□□ -2.1
TRAPPC13-205ENST00000504243 TROQ12816 1431 aaPredicted RBP1.93□□□□□ -2.1
TRAPPC13-205ENST00000504243 N4BP2Q86UW6 1770 aaPredicted RBP1.93□□□□□ -2.1
TRAPPC13-205ENST00000504243 OBSL1O75147 1896 aa1.93□□□□□ -2.1
TRAPPC13-205ENST00000504243 CPAMD8Q8IZJ3 1885 aa1.93□□□□□ -2.1
TRAPPC13-205ENST00000504243 ANKRD31Q8N7Z5 1873 aa1.93□□□□□ -2.1
TRAPPC13-205ENST00000504243 GBF1Q92538 1859 aa1.93□□□□□ -2.1
TRAPPC13-205ENST00000504243 SCN9AQ15858 1988 aa1.93□□□□□ -2.1
TRAPPC13-205ENST00000504243 DOCK4Q8N1I0 1966 aa1.93□□□□□ -2.1
TRAPPC13-205ENST00000504243 IGKV1-9A0A0C4DH69 117 aa1.93□□□□□ -2.1
TRAPPC13-205ENST00000504243 A0A0D9SG52 128 aa1.93□□□□□ -2.1
TRAPPC13-205ENST00000504243 TRBV27A0A0K0K1C4 114 aa1.93□□□□□ -2.1
TRAPPC13-205ENST00000504243 OR51F1A6NGY5 319 aa1.93□□□□□ -2.1
TRAPPC13-205ENST00000504243 PGLYRP1O75594 196 aaPredicted RBP1.93□□□□□ -2.1
TRAPPC13-205ENST00000504243 HLA-DRB4P13762 266 aa1.93□□□□□ -2.1
TRAPPC13-205ENST00000504243 RPL28P46779 137 aaKnown RBP1.93□□□□□ -2.1
TRAPPC13-205ENST00000504243 INSL3P51460 131 aa1.93□□□□□ -2.1
TRAPPC13-205ENST00000504243 FOXA3P55318 350 aaPredicted RBP1.93□□□□□ -2.1
TRAPPC13-205ENST00000504243 ZNF791Q3KP31 576 aaPredicted RBP1.93□□□□□ -2.1
TRAPPC13-205ENST00000504243 KRTAP13-4Q3LI77 160 aa1.93□□□□□ -2.1
TRAPPC13-205ENST00000504243 TMEM155Q4W5P6 130 aa1.93□□□□□ -2.1
TRAPPC13-205ENST00000504243 LINC01554Q52M75 96 aa1.93□□□□□ -2.1
TRAPPC13-205ENST00000504243 C22orf39Q6P5X5 142 aa1.93□□□□□ -2.1
TRAPPC13-205ENST00000504243 PHF5AQ7RTV0 110 aaKnown RBP1.93□□□□□ -2.1
TRAPPC13-205ENST00000504243 RPS19BP1Q86WX3 136 aaKnown RBP1.93□□□□□ -2.1
TRAPPC13-205ENST00000504243 RPP25LQ8N5L8 163 aaKnown RBP1.93□□□□□ -2.1
TRAPPC13-205ENST00000504243 TTC9CQ8N5M4 171 aa1.93□□□□□ -2.1
TRAPPC13-205ENST00000504243 OR4B1Q8NGF8 309 aa1.93□□□□□ -2.1
TRAPPC13-205ENST00000504243 NAT14Q8WUY8 206 aa1.93□□□□□ -2.1
TRAPPC13-205ENST00000504243 ZNF625Q96I27 306 aaPredicted RBP1.93□□□□□ -2.1
TRAPPC13-205ENST00000504243 AQP10Q96PS8 301 aa1.93□□□□□ -2.1
TRAPPC13-205ENST00000504243 OSTCQ9NRP0 149 aa1.93□□□□□ -2.1
TRAPPC13-205ENST00000504243 HLA-DRB4X5D2U9 266 aa1.93□□□□□ -2.1
TRAPPC13-205ENST00000504243 FANCMQ8IYD8 2048 aa1.93□□□□□ -2.1
TRAPPC13-205ENST00000504243 DSPPQ9NZW4 1301 aa1.92□□□□□ -2.1
TRAPPC13-205ENST00000504243 NUP210Q8TEM1 1887 aaPredicted RBP1.92□□□□□ -2.1
TRAPPC13-205ENST00000504243 CUL9Q8IWT3 2517 aa1.92□□□□□ -2.1
TRAPPC13-205ENST00000504243 TCRBV3S1A0A5B6 114 aa1.92□□□□□ -2.1
TRAPPC13-205ENST00000504243 HMSDA8MTL9 139 aa1.92□□□□□ -2.1
TRAPPC13-205ENST00000504243 M0R378 163 aa1.92□□□□□ -2.1
TRAPPC13-205ENST00000504243 RBP4P02753 201 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms