RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 NPBQ8NG41 125 aa19.17■□□□□ 0.66
DDX41-202ENST00000503078 ABHD17AQ96GS6 310 aa19.17■□□□□ 0.66
DDX41-202ENST00000503078 IGKV2-40A0A087WW87 121 aaPredicted RBP19.17■□□□□ 0.66
DDX41-202ENST00000503078 IGKV2D-40P01614 121 aaPredicted RBP19.17■□□□□ 0.66
DDX41-202ENST00000503078 MAP1BP46821 2468 aaKnown RBP19.17■□□□□ 0.66
DDX41-202ENST00000503078 FXYD7P58549 80 aa19.17■□□□□ 0.66
DDX41-202ENST00000503078 CFHR4Q92496 578 aa19.17■□□□□ 0.66
DDX41-202ENST00000503078 ZNF48Q96MX3 618 aaPredicted RBP19.17■□□□□ 0.66
DDX41-202ENST00000503078 FANCD2OSQ96PS1 177 aa19.17■□□□□ 0.66
DDX41-202ENST00000503078 UQCRFS1P47985 274 aa19.16■□□□□ 0.66
DDX41-202ENST00000503078 PRR25Q96S07 402 aa19.16■□□□□ 0.66
DDX41-202ENST00000503078 VPS25Q9BRG1 176 aa19.16■□□□□ 0.66
DDX41-202ENST00000503078 DPM3Q9P2X0 92 aa19.16■□□□□ 0.66
DDX41-202ENST00000503078 HILPDAQ9Y5L2 63 aa19.16■□□□□ 0.66
DDX41-202ENST00000503078 DCHS1Q96JQ0 3298 aa19.16■□□□□ 0.66
DDX41-202ENST00000503078 PTPRZ1P23471 2315 aaPredicted RBP19.16■□□□□ 0.66
DDX41-202ENST00000503078 IGLV11-55A0A075B6I3 123 aa19.15■□□□□ 0.66
DDX41-202ENST00000503078 SMAD7O15105 426 aaKnown RBP19.15■□□□□ 0.66
DDX41-202ENST00000503078 DMXL2Q8TDJ6 3036 aa19.15■□□□□ 0.66
DDX41-202ENST00000503078 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP19.15■□□□□ 0.66
DDX41-202ENST00000503078 A6NDN8 102 aa19.15■□□□□ 0.66
DDX41-202ENST00000503078 EGR2P11161 476 aaPredicted RBP19.15■□□□□ 0.66
DDX41-202ENST00000503078 CKS2P33552 79 aa19.15■□□□□ 0.66
DDX41-202ENST00000503078 Q8NA96 180 aa19.15■□□□□ 0.66
DDX41-202ENST00000503078 OR9G4Q8NGQ1 327 aa19.15■□□□□ 0.66
DDX41-202ENST00000503078 IFI27L1Q96BM0 104 aa19.15■□□□□ 0.66
DDX41-202ENST00000503078 H3BRM9 83 aa19.14■□□□□ 0.66
DDX41-202ENST00000503078 ARL6IP6Q8N6S5 226 aa19.14■□□□□ 0.66
DDX41-202ENST00000503078 ADGRG4Q8IZF6 3080 aa19.14■□□□□ 0.65
DDX41-202ENST00000503078 GAGE10A6NGK3 116 aa19.14■□□□□ 0.65
DDX41-202ENST00000503078 F8W735 103 aaPredicted RBP19.14■□□□□ 0.65
DDX41-202ENST00000503078 NPYP01303 97 aa19.14■□□□□ 0.65
DDX41-202ENST00000503078 TWIST1Q15672 202 aa19.14■□□□□ 0.65
DDX41-202ENST00000503078 FER1L6-AS1Q8NA97 138 aa19.14■□□□□ 0.65
DDX41-202ENST00000503078 LY6G5BQ8NDX9 201 aa19.14■□□□□ 0.65
DDX41-202ENST00000503078 SPTBN2O15020 2390 aa19.13■□□□□ 0.65
DDX41-202ENST00000503078 A1L4Q6 167 aa19.13■□□□□ 0.65
DDX41-202ENST00000503078 FBLL1A6NHQ2 334 aaKnown RBP19.13■□□□□ 0.65
DDX41-202ENST00000503078 NPIPB5A8MRT5 1133 aa19.13■□□□□ 0.65
DDX41-202ENST00000503078 SIVA1O15304 175 aa19.13■□□□□ 0.65
DDX41-202ENST00000503078 RPL7P18124 248 aaKnown RBP19.13■□□□□ 0.65
DDX41-202ENST00000503078 THYN1Q9P016 225 aa19.13■□□□□ 0.65
DDX41-202ENST00000503078 BSNQ9UPA5 3926 aa19.13■□□□□ 0.65
DDX41-202ENST00000503078 APC2O95996 2303 aa19.13■□□□□ 0.65
DDX41-202ENST00000503078 A0A1W2PRD5 423 aa19.13■□□□□ 0.65
DDX41-202ENST00000503078 A0A1W2PRF3 423 aa19.13■□□□□ 0.65
DDX41-202ENST00000503078 A0A1W2PRM7 423 aa19.13■□□□□ 0.65
DDX41-202ENST00000503078 C9orf118A6NHY6 69 aa19.13■□□□□ 0.65
DDX41-202ENST00000503078 SMKR1H3BMG3 65 aa19.13■□□□□ 0.65
DDX41-202ENST00000503078 HSD52Q0P140 79 aa19.13■□□□□ 0.65
DDX41-202ENST00000503078 OR11H6Q8NGC7 330 aa19.13■□□□□ 0.65
DDX41-202ENST00000503078 KALRNO60229 2985 aa19.13■□□□□ 0.65
DDX41-202ENST00000503078 C5orf64Q2M2E5 130 aa19.12■□□□□ 0.65
DDX41-202ENST00000503078 AP1S3Q96PC3 154 aa19.12■□□□□ 0.65
DDX41-202ENST00000503078 ATMQ13315 3056 aa19.12■□□□□ 0.65
DDX41-202ENST00000503078 BMI1P35226 326 aa19.12■□□□□ 0.65
DDX41-202ENST00000503078 IGFBPL1Q8WX77 278 aa19.12■□□□□ 0.65
DDX41-202ENST00000503078 C21orf62Q9NYP8 219 aa19.12■□□□□ 0.65
DDX41-202ENST00000503078 ACACAQ13085 2346 aa19.12■□□□□ 0.65
DDX41-202ENST00000503078 K7ERU9 68 aa19.11■□□□□ 0.65
DDX41-202ENST00000503078 IGLC6P0CF74 106 aa19.11■□□□□ 0.65
DDX41-202ENST00000503078 CEACAM3P40198 252 aa19.11■□□□□ 0.65
DDX41-202ENST00000503078 TCTAP57738 103 aa19.11■□□□□ 0.65
DDX41-202ENST00000503078 ZNF80P51504 273 aaPredicted RBP19.11■□□□□ 0.65
DDX41-202ENST00000503078 HES1Q14469 280 aa19.11■□□□□ 0.65
DDX41-202ENST00000503078 UFSP1Q6NVU6 142 aa19.11■□□□□ 0.65
DDX41-202ENST00000503078 GTF2H5Q6ZYL4 71 aa19.11■□□□□ 0.65
DDX41-202ENST00000503078 NPFFR1Q9GZQ6 430 aa19.11■□□□□ 0.65
DDX41-202ENST00000503078 NDUFS7O75251 213 aa19.1■□□□□ 0.65
DDX41-202ENST00000503078 ZNF672Q499Z4 452 aaPredicted RBP19.1■□□□□ 0.65
DDX41-202ENST00000503078 ADAMTSL5Q6ZMM2 481 aa19.1■□□□□ 0.65
DDX41-202ENST00000503078 OR4X2Q8NGF9 303 aa19.1■□□□□ 0.65
DDX41-202ENST00000503078 Q8TAT8 98 aa19.1■□□□□ 0.65
DDX41-202ENST00000503078 ZNF562Q6V9R5 426 aa19.09■□□□□ 0.65
DDX41-202ENST00000503078 TTC9CQ8N5M4 171 aa19.09■□□□□ 0.65
DDX41-202ENST00000503078 ARPC1AQ92747 370 aa19.09■□□□□ 0.65
DDX41-202ENST00000503078 VGLL1Q99990 258 aa19.09■□□□□ 0.65
DDX41-202ENST00000503078 FOXC1Q12948 553 aa19.08■□□□□ 0.65
DDX41-202ENST00000503078 KIR3DS1Q14943 382 aa19.08■□□□□ 0.65
DDX41-202ENST00000503078 SMIM15Q7Z3B0 74 aa19.08■□□□□ 0.65
DDX41-202ENST00000503078 COL25A1Q9BXS0 654 aaPredicted RBP19.08■□□□□ 0.65
DDX41-202ENST00000503078 JMJD8Q96S16 334 aa19.08■□□□□ 0.64
DDX41-202ENST00000503078 POLEQ07864 2286 aa19.08■□□□□ 0.64
DDX41-202ENST00000503078 ZNF575Q86XF7 245 aa19.07■□□□□ 0.64
DDX41-202ENST00000503078 H3BUT2 72 aa19.07■□□□□ 0.64
DDX41-202ENST00000503078 IGHV3-23P01764 117 aa19.07■□□□□ 0.64
DDX41-202ENST00000503078 NMUP48645 174 aa19.07■□□□□ 0.64
DDX41-202ENST00000503078 SRSF2Q01130 221 aaKnown RBP19.07■□□□□ 0.64
DDX41-202ENST00000503078 KLRD1Q13241 179 aa19.07■□□□□ 0.64
DDX41-202ENST00000503078 DKK2Q9UBU2 259 aa19.07■□□□□ 0.64
DDX41-202ENST00000503078 SMAD5-AS1Q9Y6J3 95 aa19.07■□□□□ 0.64
DDX41-202ENST00000503078 NDPQ00604 133 aa19.06■□□□□ 0.64
DDX41-202ENST00000503078 PRR30Q53SZ7 412 aaPredicted RBP19.06■□□□□ 0.64
DDX41-202ENST00000503078 PCP2Q8IVA1 136 aa19.06■□□□□ 0.64
DDX41-202ENST00000503078 MAP1LC3AQ9H492 121 aa19.06■□□□□ 0.64
DDX41-202ENST00000503078 IGHG4P01861 327 aa19.06■□□□□ 0.64
DDX41-202ENST00000503078 RNF185Q96GF1 192 aa19.06■□□□□ 0.64
DDX41-202ENST00000503078 IGFL4Q6B9Z1 124 aa19.05■□□□□ 0.64
DDX41-202ENST00000503078 WFDC3Q8IUB2 231 aa19.05■□□□□ 0.64
DDX41-202ENST00000503078 LINC01560Q8TB33 94 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms