RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 TMEM147Q9BVK8 224 aa4.63□□□□□ -1.67
SOX2-OT-218ENST00000498731 GGTLC1Q9BX51 225 aa4.63□□□□□ -1.67
SOX2-OT-218ENST00000498731 CUBNO60494 3623 aa4.63□□□□□ -1.67
SOX2-OT-218ENST00000498731 UBR5O95071 2799 aaPredicted RBP4.63□□□□□ -1.67
SOX2-OT-218ENST00000498731 IGHV3-43A0A0B4J1X8 118 aa4.63□□□□□ -1.67
SOX2-OT-218ENST00000498731 A0A1B0GWB2 263 aa4.63□□□□□ -1.67
SOX2-OT-218ENST00000498731 IZUMO1RA6ND01 250 aa4.63□□□□□ -1.67
SOX2-OT-218ENST00000498731 A6NDN8 102 aa4.63□□□□□ -1.67
SOX2-OT-218ENST00000498731 C15orf62A8K5M9 175 aa4.63□□□□□ -1.67
SOX2-OT-218ENST00000498731 DEFB108AA8MXU0 73 aa4.63□□□□□ -1.67
SOX2-OT-218ENST00000498731 FAM229AH3BQW9 127 aa4.63□□□□□ -1.67
SOX2-OT-218ENST00000498731 IGHV3-43DP0DP04 118 aa4.63□□□□□ -1.67
SOX2-OT-218ENST00000498731 FAM159AQ6UWV7 190 aa4.63□□□□□ -1.67
SOX2-OT-218ENST00000498731 RBMXL3Q8N7X1 1067 aaKnown RBP4.63□□□□□ -1.67
SOX2-OT-218ENST00000498731 OR8A1Q8NGG7 326 aa4.63□□□□□ -1.67
SOX2-OT-218ENST00000498731 TMEM191AQ9H0A3 160 aa4.63□□□□□ -1.67
SOX2-OT-218ENST00000498731 TLN2Q9Y4G6 2542 aa4.62□□□□□ -1.67
SOX2-OT-218ENST00000498731 ITPR3Q14573 2671 aa4.62□□□□□ -1.67
SOX2-OT-218ENST00000498731 TRAV4A0A0B4J268 109 aa4.62□□□□□ -1.67
SOX2-OT-218ENST00000498731 TREML4Q6UXN2 200 aa4.62□□□□□ -1.67
SOX2-OT-218ENST00000498731 IGF2BP2-AS1Q96M15 143 aa4.62□□□□□ -1.67
SOX2-OT-218ENST00000498731 IDI2-AS1Q9NZ38 188 aa4.62□□□□□ -1.67
SOX2-OT-218ENST00000498731 DKK2Q9UBU2 259 aa4.62□□□□□ -1.67
SOX2-OT-218ENST00000498731 TRAV9-1A0A075B6T8 112 aa4.62□□□□□ -1.67
SOX2-OT-218ENST00000498731 A1L4Q6 167 aa4.62□□□□□ -1.67
SOX2-OT-218ENST00000498731 FABP5P3A8MUU1 101 aa4.62□□□□□ -1.67
SOX2-OT-218ENST00000498731 IGLL5B9A064 214 aa4.62□□□□□ -1.67
SOX2-OT-218ENST00000498731 APOMO95445 188 aa4.62□□□□□ -1.67
SOX2-OT-218ENST00000498731 CSN1S1P47710 185 aa4.62□□□□□ -1.67
SOX2-OT-218ENST00000498731 COX19Q49B96 90 aa4.62□□□□□ -1.67
SOX2-OT-218ENST00000498731 ZC2HC1BQ5TFG8 222 aa4.62□□□□□ -1.67
SOX2-OT-218ENST00000498731 FA2HQ7L5A8 372 aa4.62□□□□□ -1.67
SOX2-OT-218ENST00000498731 VKORC1L1Q8N0U8 176 aa4.62□□□□□ -1.67
SOX2-OT-218ENST00000498731 TTC9CQ8N5M4 171 aa4.62□□□□□ -1.67
SOX2-OT-218ENST00000498731 SAP30LQ9HAJ7 183 aa4.62□□□□□ -1.67
SOX2-OT-218ENST00000498731 LRBAP50851 2863 aa4.62□□□□□ -1.67
SOX2-OT-218ENST00000498731 PLXNB1O43157 2135 aa4.62□□□□□ -1.67
SOX2-OT-218ENST00000498731 TRAV5A0A0B4J249 113 aa4.61□□□□□ -1.67
SOX2-OT-218ENST00000498731 LRRC30A6NM36 301 aa4.61□□□□□ -1.67
SOX2-OT-218ENST00000498731 SS18L1O75177 396 aaPredicted RBP4.61□□□□□ -1.67
SOX2-OT-218ENST00000498731 MYOD1P15172 320 aa4.61□□□□□ -1.67
SOX2-OT-218ENST00000498731 UCNP55089 124 aa4.61□□□□□ -1.67
SOX2-OT-218ENST00000498731 LINC01620Q4KN68 170 aa4.61□□□□□ -1.67
SOX2-OT-218ENST00000498731 COQ2Q96H96 371 aa4.61□□□□□ -1.67
SOX2-OT-218ENST00000498731 JMJD1CQ15652 2540 aa4.61□□□□□ -1.67
SOX2-OT-218ENST00000498731 A8MWL6 223 aa4.61□□□□□ -1.67
SOX2-OT-218ENST00000498731 K7ENP7 123 aa4.61□□□□□ -1.67
SOX2-OT-218ENST00000498731 SMIM13P0DJ93 91 aa4.61□□□□□ -1.67
SOX2-OT-218ENST00000498731 REG1BP48304 166 aa4.61□□□□□ -1.67
SOX2-OT-218ENST00000498731 CACNG7P62955 275 aa4.61□□□□□ -1.67
SOX2-OT-218ENST00000498731 UTF1Q5T230 341 aa4.61□□□□□ -1.67
SOX2-OT-218ENST00000498731 OR5AN1Q8NGI8 311 aa4.61□□□□□ -1.67
SOX2-OT-218ENST00000498731 Q8TCH9 128 aa4.61□□□□□ -1.67
SOX2-OT-218ENST00000498731 ZNF747Q9BV97 191 aa4.61□□□□□ -1.67
SOX2-OT-218ENST00000498731 WNK2Q9Y3S1 2297 aa4.61□□□□□ -1.67
SOX2-OT-218ENST00000498731 C17orf98A8MV24 154 aa4.61□□□□□ -1.67
SOX2-OT-218ENST00000498731 C9JCJ5 164 aa4.61□□□□□ -1.67
SOX2-OT-218ENST00000498731 E9PLD3 99 aa4.61□□□□□ -1.67
SOX2-OT-218ENST00000498731 CCL24O00175 119 aa4.61□□□□□ -1.67
SOX2-OT-218ENST00000498731 IGHG3P01860 377 aa4.61□□□□□ -1.67
SOX2-OT-218ENST00000498731 FGF12P61328 243 aa4.61□□□□□ -1.67
SOX2-OT-218ENST00000498731 GNG5P63218 68 aa4.61□□□□□ -1.67
SOX2-OT-218ENST00000498731 CCL8P80075 99 aa4.61□□□□□ -1.67
SOX2-OT-218ENST00000498731 BAALCQ8WXS3 180 aa4.61□□□□□ -1.67
SOX2-OT-218ENST00000498731 POLDIP2Q9Y2S7 368 aa4.61□□□□□ -1.67
SOX2-OT-218ENST00000498731 TRAV3A0A0B4J244 114 aa4.6□□□□□ -1.67
SOX2-OT-218ENST00000498731 J3QT63 122 aa4.6□□□□□ -1.67
SOX2-OT-218ENST00000498731 OR2H2O95918 312 aa4.6□□□□□ -1.67
SOX2-OT-218ENST00000498731 MLANAQ16655 118 aa4.6□□□□□ -1.67
SOX2-OT-218ENST00000498731 ZNF474Q6S9Z5 364 aaPredicted RBP4.6□□□□□ -1.67
SOX2-OT-218ENST00000498731 ZFP2Q6ZN57 461 aa4.6□□□□□ -1.67
SOX2-OT-218ENST00000498731 Q6ZS92 163 aa4.6□□□□□ -1.67
SOX2-OT-218ENST00000498731 C11orf52Q96A22 123 aa4.6□□□□□ -1.67
SOX2-OT-218ENST00000498731 PGLYRP4Q96LB8 373 aa4.6□□□□□ -1.67
SOX2-OT-218ENST00000498731 HSD17B10Q99714 261 aaKnown RBP4.6□□□□□ -1.67
SOX2-OT-218ENST00000498731 DCTN5Q9BTE1 182 aa4.6□□□□□ -1.67
SOX2-OT-218ENST00000498731 TCF19Q9Y242 345 aa4.6□□□□□ -1.67
SOX2-OT-218ENST00000498731 CYSLTR1Q9Y271 337 aa4.6□□□□□ -1.67
SOX2-OT-218ENST00000498731 KLK5Q9Y337 293 aaPredicted RBP4.6□□□□□ -1.67
SOX2-OT-218ENST00000498731 IGHV1-18A0A0C4DH31 117 aa4.6□□□□□ -1.67
SOX2-OT-218ENST00000498731 LOC389332A0A1B0GUA5 103 aa4.6□□□□□ -1.67
SOX2-OT-218ENST00000498731 A0A1B0GXF2 115 aa4.6□□□□□ -1.67
SOX2-OT-218ENST00000498731 CXorf1O96002 111 aa4.6□□□□□ -1.67
SOX2-OT-218ENST00000498731 GAGE13Q4V321 117 aa4.6□□□□□ -1.67
SOX2-OT-218ENST00000498731 Q6ZSR3 168 aa4.6□□□□□ -1.67
SOX2-OT-218ENST00000498731 IL17RELQ6ZVW7 336 aa4.6□□□□□ -1.67
SOX2-OT-218ENST00000498731 WDR31Q8NA23 367 aa4.6□□□□□ -1.67
SOX2-OT-218ENST00000498731 GRAMD2BQ96HH9 432 aa4.6□□□□□ -1.67
SOX2-OT-218ENST00000498731 MS4A6AQ9H2W1 248 aa4.6□□□□□ -1.67
SOX2-OT-218ENST00000498731 OSTCQ9NRP0 149 aa4.6□□□□□ -1.67
SOX2-OT-218ENST00000498731 WDR83OSQ9Y284 106 aa4.6□□□□□ -1.67
SOX2-OT-218ENST00000498731 DCHS2Q6V1P9 2916 aa4.6□□□□□ -1.67
SOX2-OT-218ENST00000498731 NPIPB6E9PJ23 425 aa4.6□□□□□ -1.67
SOX2-OT-218ENST00000498731 F8W1H4 67 aa4.6□□□□□ -1.67
SOX2-OT-218ENST00000498731 OVOL3O00110 214 aa4.6□□□□□ -1.67
SOX2-OT-218ENST00000498731 OPRK1P41145 380 aa4.6□□□□□ -1.67
SOX2-OT-218ENST00000498731 TMEM42Q69YG0 159 aa4.6□□□□□ -1.67
SOX2-OT-218ENST00000498731 ZNF843Q8N446 348 aa4.6□□□□□ -1.67
SOX2-OT-218ENST00000498731 DRAM1Q8N682 238 aa4.6□□□□□ -1.67
SOX2-OT-218ENST00000498731 MAPKAPK5-AS1Q8N8E1 139 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms