RNA–Protein interactions for RNA: ENST00000498187.6

NKX2-1-202, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 2,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-202ENST00000498187 VPS25Q9BRG1 176 aa15.48■□□□□ 0.07
NKX2-1-202ENST00000498187 MSRB2Q9Y3D2 182 aa15.48■□□□□ 0.07
NKX2-1-202ENST00000498187 TRAV8-6A0A0B4J262 113 aa15.47■□□□□ 0.07
NKX2-1-202ENST00000498187 SERTM2A0A1B0GWG4 89 aa15.47■□□□□ 0.07
NKX2-1-202ENST00000498187 GAGE12BA1L429 117 aa15.47■□□□□ 0.07
NKX2-1-202ENST00000498187 MRPS12O15235 138 aaKnown RBP15.47■□□□□ 0.07
NKX2-1-202ENST00000498187 OR11H6Q8NGC7 330 aa15.47■□□□□ 0.07
NKX2-1-202ENST00000498187 OR8A1Q8NGG7 326 aa15.47■□□□□ 0.07
NKX2-1-202ENST00000498187 U3KQK5 164 aa15.47■□□□□ 0.07
NKX2-1-202ENST00000498187 D6R8Y8 96 aa15.46■□□□□ 0.07
NKX2-1-202ENST00000498187 SNAI2O43623 268 aa15.46■□□□□ 0.07
NKX2-1-202ENST00000498187 LGALS9BQ3B8N2 356 aa15.46■□□□□ 0.07
NKX2-1-202ENST00000498187 LGALS9CQ6DKI2 356 aa15.46■□□□□ 0.07
NKX2-1-202ENST00000498187 PRELID3AQ96N28 172 aa15.46■□□□□ 0.07
NKX2-1-202ENST00000498187 SIGLEC8Q9NYZ4 499 aa15.46■□□□□ 0.07
NKX2-1-202ENST00000498187 WI2-2373I1.2A0A1W2PRP0 233 aa15.46■□□□□ 0.07
NKX2-1-202ENST00000498187 NDUFA3O95167 84 aa15.46■□□□□ 0.07
NKX2-1-202ENST00000498187 HES1Q14469 280 aa15.46■□□□□ 0.07
NKX2-1-202ENST00000498187 FAM104BQ5XKR9 115 aa15.46■□□□□ 0.07
NKX2-1-202ENST00000498187 ORMDL3Q8N138 153 aa15.46■□□□□ 0.07
NKX2-1-202ENST00000498187 BCL6BQ8N143 479 aaPredicted RBP15.46■□□□□ 0.07
NKX2-1-202ENST00000498187 NPBQ8NG41 125 aa15.46■□□□□ 0.07
NKX2-1-202ENST00000498187 AAMDCQ9H7C9 122 aa15.46■□□□□ 0.07
NKX2-1-202ENST00000498187 A0A096LNJ9 63 aa15.45■□□□□ 0.06
NKX2-1-202ENST00000498187 LOC389332A0A1B0GUA5 103 aa15.45■□□□□ 0.06
NKX2-1-202ENST00000498187 A0A1W2PRD5 423 aa15.45■□□□□ 0.06
NKX2-1-202ENST00000498187 A0A1W2PRF3 423 aa15.45■□□□□ 0.06
NKX2-1-202ENST00000498187 A0A1W2PRM7 423 aa15.45■□□□□ 0.06
NKX2-1-202ENST00000498187 TMEM189A5PLL7 270 aa15.45■□□□□ 0.06
NKX2-1-202ENST00000498187 M0R3E3 92 aa15.45■□□□□ 0.06
NKX2-1-202ENST00000498187 GNG7O60262 68 aa15.45■□□□□ 0.06
NKX2-1-202ENST00000498187 PDE6HQ13956 83 aa15.45■□□□□ 0.06
NKX2-1-202ENST00000498187 LYZL1Q6UWQ5 148 aa15.45■□□□□ 0.06
NKX2-1-202ENST00000498187 FAM106CPP0CH98 169 aa15.45■□□□□ 0.06
NKX2-1-202ENST00000498187 FGF6P10767 208 aa15.45■□□□□ 0.06
NKX2-1-202ENST00000498187 CEACAM3P40198 252 aa15.45■□□□□ 0.06
NKX2-1-202ENST00000498187 FAM106AQ4KMX7 169 aa15.45■□□□□ 0.06
NKX2-1-202ENST00000498187 SMIM15Q7Z3B0 74 aa15.45■□□□□ 0.06
NKX2-1-202ENST00000498187 A6NDN8 102 aa15.44■□□□□ 0.06
NKX2-1-202ENST00000498187 K7ERU9 68 aa15.44■□□□□ 0.06
NKX2-1-202ENST00000498187 UCNP55089 124 aa15.44■□□□□ 0.06
NKX2-1-202ENST00000498187 C8orf49Q96NF6 230 aa15.44■□□□□ 0.06
NKX2-1-202ENST00000498187 RAB1BQ9H0U4 201 aa15.44■□□□□ 0.06
NKX2-1-202ENST00000498187 LOXL1Q08397 574 aaPredicted RBP15.44■□□□□ 0.06
NKX2-1-202ENST00000498187 C5orf64Q2M2E5 130 aa15.44■□□□□ 0.06
NKX2-1-202ENST00000498187 FBXL19-AS1Q494R0 122 aa15.44■□□□□ 0.06
NKX2-1-202ENST00000498187 ABCA4P78363 2273 aa15.43■□□□□ 0.06
NKX2-1-202ENST00000498187 GAGE10A6NGK3 116 aa15.43■□□□□ 0.06
NKX2-1-202ENST00000498187 AP1S3Q96PC3 154 aa15.43■□□□□ 0.06
NKX2-1-202ENST00000498187 FANCD2OSQ96PS1 177 aa15.43■□□□□ 0.06
NKX2-1-202ENST00000498187 RABAC1Q9UI14 185 aa15.43■□□□□ 0.06
NKX2-1-202ENST00000498187 PTPRQQ9UMZ3 2332 aa15.43■□□□□ 0.06
NKX2-1-202ENST00000498187 TLN1Q9Y490 2541 aaKnown RBP15.43■□□□□ 0.06
NKX2-1-202ENST00000498187 FOXE3Q13461 319 aa15.43■□□□□ 0.06
NKX2-1-202ENST00000498187 AMN1Q8IY45 258 aa15.43■□□□□ 0.06
NKX2-1-202ENST00000498187 BOD1L2Q8IYS8 172 aa15.43■□□□□ 0.06
NKX2-1-202ENST00000498187 TIMD4Q96H15 378 aa15.43■□□□□ 0.06
NKX2-1-202ENST00000498187 ANKHD1Q8IWZ3 2542 aaKnown RBP15.42■□□□□ 0.06
NKX2-1-202ENST00000498187 IGLV11-55A0A075B6I3 123 aa15.42■□□□□ 0.06
NKX2-1-202ENST00000498187 TMEM213A2RRL7 107 aa15.42■□□□□ 0.06
NKX2-1-202ENST00000498187 ODF3BA8MYP8 253 aa15.42■□□□□ 0.06
NKX2-1-202ENST00000498187 H3BRM9 83 aa15.42■□□□□ 0.06
NKX2-1-202ENST00000498187 HBDP02042 147 aa15.42■□□□□ 0.06
NKX2-1-202ENST00000498187 GTF2H5Q6ZYL4 71 aa15.42■□□□□ 0.06
NKX2-1-202ENST00000498187 OR9G4Q8NGQ1 327 aa15.42■□□□□ 0.06
NKX2-1-202ENST00000498187 TACC2O95359 2948 aa15.42■□□□□ 0.06
NKX2-1-202ENST00000498187 CCL21O00585 134 aa15.42■□□□□ 0.06
NKX2-1-202ENST00000498187 SIVA1O15304 175 aa15.42■□□□□ 0.06
NKX2-1-202ENST00000498187 MFAP4P55083 255 aa15.42■□□□□ 0.06
NKX2-1-202ENST00000498187 TMSB15BA0A087X1C1 80 aa15.41■□□□□ 0.06
NKX2-1-202ENST00000498187 SH2D1AO60880 128 aa15.41■□□□□ 0.06
NKX2-1-202ENST00000498187 CACNG7P62955 275 aa15.41■□□□□ 0.06
NKX2-1-202ENST00000498187 CDSNQ15517 529 aa15.41■□□□□ 0.06
NKX2-1-202ENST00000498187 PIP4P2Q8N4L2 257 aa15.41■□□□□ 0.06
NKX2-1-202ENST00000498187 NPIPB5A8MRT5 1133 aa15.4■□□□□ 0.06
NKX2-1-202ENST00000498187 M0R1W7 72 aa15.4■□□□□ 0.06
NKX2-1-202ENST00000498187 SMAD7O15105 426 aaKnown RBP15.4■□□□□ 0.06
NKX2-1-202ENST00000498187 ARPC1AQ92747 370 aa15.4■□□□□ 0.06
NKX2-1-202ENST00000498187 A1L4Q6 167 aa15.4■□□□□ 0.06
NKX2-1-202ENST00000498187 C9orf118A6NHY6 69 aa15.4■□□□□ 0.06
NKX2-1-202ENST00000498187 F8W735 103 aaPredicted RBP15.4■□□□□ 0.06
NKX2-1-202ENST00000498187 PRTN3P24158 256 aa15.4■□□□□ 0.06
NKX2-1-202ENST00000498187 UQCRFS1P47985 274 aa15.4■□□□□ 0.06
NKX2-1-202ENST00000498187 NDPQ00604 133 aa15.4■□□□□ 0.06
NKX2-1-202ENST00000498187 HSD52Q0P140 79 aa15.4■□□□□ 0.06
NKX2-1-202ENST00000498187 MRPL51Q4U2R6 128 aaKnown RBP15.4■□□□□ 0.06
NKX2-1-202ENST00000498187 CLEC2AQ6UVW9 174 aa15.4■□□□□ 0.06
NKX2-1-202ENST00000498187 CACNA1AO00555 2505 aa15.4■□□□□ 0.06
NKX2-1-202ENST00000498187 COX8CQ7Z4L0 72 aa15.39■□□□□ 0.05
NKX2-1-202ENST00000498187 ZNF562Q6V9R5 426 aa15.39■□□□□ 0.05
NKX2-1-202ENST00000498187 OR4X2Q8NGF9 303 aa15.39■□□□□ 0.05
NKX2-1-202ENST00000498187 ZNF48Q96MX3 618 aaPredicted RBP15.39■□□□□ 0.05
NKX2-1-202ENST00000498187 FBLL1A6NHQ2 334 aaKnown RBP15.38■□□□□ 0.05
NKX2-1-202ENST00000498187 NCBP2LA6PVI3 153 aaKnown RBP15.38■□□□□ 0.05
NKX2-1-202ENST00000498187 IGHV3-23P01764 117 aa15.38■□□□□ 0.05
NKX2-1-202ENST00000498187 CKS2P33552 79 aa15.38■□□□□ 0.05
NKX2-1-202ENST00000498187 LRBAP50851 2863 aa15.38■□□□□ 0.05
NKX2-1-202ENST00000498187 PAX8Q06710 450 aa15.38■□□□□ 0.05
NKX2-1-202ENST00000498187 IFI27L1Q96BM0 104 aa15.38■□□□□ 0.05
NKX2-1-202ENST00000498187 C21orf62Q9NYP8 219 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms