RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 SYNE1Q8NF91 8797 aaKnown RBP1.02□□□□□ -2.25
XRN1-214ENST00000498077 A0A087WZ39 114 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 TMSB15BA0A087X1C1 80 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 IGLV9-49A0A0B4J1Y8 123 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 OR2C1O95371 312 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 ZNF682O95780 498 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 PIPP12273 146 aaPredicted RBP1.02□□□□□ -2.25
XRN1-214ENST00000498077 RRN3P1Q2M238 152 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 DNLZQ5SXM8 178 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 TEX36Q5VZQ5 186 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 C11orf71Q6IPW1 123 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 MYOZ3Q8TDC0 251 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 SH3BGRL3Q9H299 93 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 CHCHD3Q9NX63 227 aaKnown RBP1.02□□□□□ -2.25
XRN1-214ENST00000498077 KMT2AQ03164 3969 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 SCN2AQ99250 2005 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 IGHV3-73A0A0B4J1V6 119 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 TMEM223A0PJW6 202 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 LY6G6CO95867 125 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 IGLV7-43P04211 117 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 CD14P08571 375 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 HOXD4P09016 255 aaPredicted RBP1.02□□□□□ -2.25
XRN1-214ENST00000498077 SAA1P0DJI8 122 aaPredicted RBP1.02□□□□□ -2.25
XRN1-214ENST00000498077 ATP5DP30049 168 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 RPS24P62847 133 aaKnown RBP1.02□□□□□ -2.25
XRN1-214ENST00000498077 CXCL6P80162 114 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 MRPS6P82932 125 aaKnown RBP1.02□□□□□ -2.25
XRN1-214ENST00000498077 PMAIP1Q13794 54 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 SLC17A1Q14916 467 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 CTXN3Q4LDR2 81 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 SPANXN2Q5MJ10 180 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 C1orf185Q5T7R7 199 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 CBLN3Q6UW01 205 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 C2orf66Q6UXQ4 117 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 C17orf82Q86X59 251 aaPredicted RBP1.02□□□□□ -2.25
XRN1-214ENST00000498077 OR8A1Q8NGG7 326 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 ST3GAL6Q9Y274 331 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 C22orf24Q9Y442 160 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 CELSR1Q9NYQ6 3014 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 SVEP1Q4LDE5 3571 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 PCDH15Q96QU1 1955 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 C9orf170A2RU37 121 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 PATE4P0C8F1 98 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 CTLA4P16410 223 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 C4BPBP20851 252 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 COL8A2P25067 703 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 BACE1P56817 501 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 KRTAP10-12P60413 245 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 PRR3P79522 188 aaKnown RBP1.02□□□□□ -2.25
XRN1-214ENST00000498077 DEFB112Q30KQ8 113 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 DEFB110Q30KQ9 67 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 PIGYQ3MUY2 71 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 C9orf47Q6ZRZ4 202 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 DEFB128Q7Z7B8 93 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 LINC01560Q8TB33 94 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 GPX7Q96SL4 187 aaPredicted RBP1.02□□□□□ -2.25
XRN1-214ENST00000498077 C11orf70Q9BRQ4 267 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 METTL1Q9UBP6 276 aaKnown RBP1.02□□□□□ -2.25
XRN1-214ENST00000498077 FUT9Q9Y231 359 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 CHST2Q9Y4C5 530 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 NBEAQ8NFP9 2946 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 LOXHD1Q8IVV2 1947 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 C11orf97A0A1B0GVM6 126 aaPredicted RBP1.02□□□□□ -2.25
XRN1-214ENST00000498077 RAMP1O60894 148 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 HYPMO75409 117 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 TOM1L1O75674 476 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 CEACAM4O75871 244 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 IGHV1-69P01742 117 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 RFPL3SP0C7P2 107 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 BAALC-AS2P0C853 105 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 PSMB4P28070 264 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 DYNLT3P51808 116 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 KRTAP10-9P60411 292 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 CAV1Q03135 178 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 PLGLAQ15195 96 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 ZNF726P1Q15940 193 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 SPRNQ5BIV9 151 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 C9orf66Q5T8R8 295 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 GLYATQ6IB77 296 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 SLC48A1Q6P1K1 146 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 Q6ZR54 194 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 HIST3H2BBQ8N257 126 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 ZNF433Q8N7K0 673 aaPredicted RBP1.02□□□□□ -2.25
XRN1-214ENST00000498077 C19orf18Q8NEA5 215 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 OR5R1Q8NH85 324 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 TMEM234Q8WY98 164 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 WFDC6Q9BQY6 131 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 GLRX2Q9NS18 164 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 TMEM242Q9NWH2 141 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 PILRBQ9UKJ0 227 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 PLXND1Q9Y4D7 1925 aa1.01□□□□□ -2.25
XRN1-214ENST00000498077 A0A087WWV3 80 aa1.01□□□□□ -2.25
XRN1-214ENST00000498077 IGHV3-15A0A0B4J1V0 119 aa1.01□□□□□ -2.25
XRN1-214ENST00000498077 NDUFS8O00217 210 aa1.01□□□□□ -2.25
XRN1-214ENST00000498077 IFRD1O00458 451 aaPredicted RBP1.01□□□□□ -2.25
XRN1-214ENST00000498077 CDIPTO14735 213 aa1.01□□□□□ -2.25
XRN1-214ENST00000498077 LEPROTL1O95214 131 aa1.01□□□□□ -2.25
XRN1-214ENST00000498077 GABRB3P28472 473 aa1.01□□□□□ -2.25
XRN1-214ENST00000498077 IL12AP29459 219 aa1.01□□□□□ -2.25
XRN1-214ENST00000498077 ASCL1P50553 236 aa1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms