RNA–Protein interactions for RNA: ENST00000497318.1

SUPT20H-223, Transcript of SPT20 homolog, SAGA complex component, human

TSL 3

Gene SUPT20H, Length 734 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT20H-223	ENST00000497318	PMS2P5	A8MQ11	134 aa		11.3	□□□□□ -0.6
SUPT20H-223	ENST00000497318		K7EP13	123 aa		11.3	□□□□□ -0.6
SUPT20H-223	ENST00000497318	OR5G3	P0C626	314 aa		11.3	□□□□□ -0.6
SUPT20H-223	ENST00000497318	DNAH10OS	P0CZ25	163 aa		11.3	□□□□□ -0.6
SUPT20H-223	ENST00000497318	ANXA7	P20073	488 aa	Known RBP	11.3	□□□□□ -0.6
SUPT20H-223	ENST00000497318	S100A5	P33763	92 aa		11.3	□□□□□ -0.6
SUPT20H-223	ENST00000497318		Q6ZTI0	123 aa		11.3	□□□□□ -0.6
SUPT20H-223	ENST00000497318	TNFRSF18	Q9Y5U5	241 aa		11.3	□□□□□ -0.6
SUPT20H-223	ENST00000497318	ICOS	Q9Y6W8	199 aa		11.3	□□□□□ -0.6
SUPT20H-223	ENST00000497318	SMCO3	A2RU48	225 aa		11.29	□□□□□ -0.6
SUPT20H-223	ENST00000497318	CXCL2	P19875	107 aa		11.29	□□□□□ -0.6
SUPT20H-223	ENST00000497318	BTC	P35070	178 aa		11.29	□□□□□ -0.6
SUPT20H-223	ENST00000497318	UBE2M	P61081	183 aa	Known RBP	11.29	□□□□□ -0.6
SUPT20H-223	ENST00000497318	SELENOT	P62341	195 aa		11.29	□□□□□ -0.6
SUPT20H-223	ENST00000497318	ID3	Q02535	119 aa		11.29	□□□□□ -0.6
SUPT20H-223	ENST00000497318	GFI1B	Q5VTD9	330 aa		11.29	□□□□□ -0.6
SUPT20H-223	ENST00000497318	CYP2G1P	Q6ZSU1	146 aa		11.29	□□□□□ -0.6
SUPT20H-223	ENST00000497318	PYGO2	Q9BRQ0	406 aa		11.29	□□□□□ -0.6
SUPT20H-223	ENST00000497318	TMEM70	Q9BUB7	260 aa		11.29	□□□□□ -0.6
SUPT20H-223	ENST00000497318	STRAP	Q9Y3F4	350 aa	Known RBP	11.29	□□□□□ -0.6
SUPT20H-223	ENST00000497318	PAX4	O43316	350 aa		11.28	□□□□□ -0.6
SUPT20H-223	ENST00000497318	SSSCA1	O60232	199 aa		11.28	□□□□□ -0.6
SUPT20H-223	ENST00000497318	NDUFB6	O95139	128 aa		11.28	□□□□□ -0.6
SUPT20H-223	ENST00000497318	RRAS2	P62070	204 aa	Predicted RBP	11.28	□□□□□ -0.6
SUPT20H-223	ENST00000497318	SERTAD4-AS1	Q5TG53	156 aa		11.28	□□□□□ -0.6
SUPT20H-223	ENST00000497318	LCN15	Q6UWW0	184 aa		11.28	□□□□□ -0.6
SUPT20H-223	ENST00000497318	SLC50A1	Q9BRV3	221 aa		11.28	□□□□□ -0.6
SUPT20H-223	ENST00000497318	PSENEN	Q9NZ42	101 aa		11.28	□□□□□ -0.6
SUPT20H-223	ENST00000497318	MSRB1	Q9NZV6	116 aa		11.28	□□□□□ -0.6
SUPT20H-223	ENST00000497318	LY96	Q9Y6Y9	160 aa		11.28	□□□□□ -0.6
SUPT20H-223	ENST00000497318	NPIPB6	E9PJ23	425 aa		11.27	□□□□□ -0.61
SUPT20H-223	ENST00000497318	LINC00869	P0C866	280 aa		11.27	□□□□□ -0.61
SUPT20H-223	ENST00000497318	LEP	P41159	167 aa		11.27	□□□□□ -0.61
SUPT20H-223	ENST00000497318	PLP1	P60201	277 aa		11.27	□□□□□ -0.61
SUPT20H-223	ENST00000497318	SLA	Q13239	276 aa		11.27	□□□□□ -0.61
SUPT20H-223	ENST00000497318	KIR3DS1	Q14943	382 aa		11.27	□□□□□ -0.61
SUPT20H-223	ENST00000497318	SYT8	Q8NBV8	401 aa		11.27	□□□□□ -0.61
SUPT20H-223	ENST00000497318	ZNF680	Q8NEM1	530 aa		11.27	□□□□□ -0.61
SUPT20H-223	ENST00000497318	UBR4	Q5T4S7	5183 aa		11.27	□□□□□ -0.61
SUPT20H-223	ENST00000497318	TRGV1	A0A0A0MS02	117 aa		11.26	□□□□□ -0.61
SUPT20H-223	ENST00000497318	TRAV12-3	A0A0B4J271	114 aa		11.26	□□□□□ -0.61
SUPT20H-223	ENST00000497318	ZNF324	O75467	553 aa	Predicted RBP	11.26	□□□□□ -0.61
SUPT20H-223	ENST00000497318	SNRPC	P09234	159 aa	Known RBP	11.26	□□□□□ -0.61
SUPT20H-223	ENST00000497318	OR4E1	P0C645	316 aa		11.26	□□□□□ -0.61
SUPT20H-223	ENST00000497318	EVI2A	P22794	236 aa		11.26	□□□□□ -0.61
SUPT20H-223	ENST00000497318	PATE2	Q6UY27	113 aa		11.26	□□□□□ -0.61
SUPT20H-223	ENST00000497318	ZNF331	Q9NQX6	463 aa	Predicted RBP	11.26	□□□□□ -0.61
SUPT20H-223	ENST00000497318	FUT9	Q9Y231	359 aa		11.26	□□□□□ -0.61
SUPT20H-223	ENST00000497318	IGLV5-52	A0A0A0MRZ9	124 aa		11.25	□□□□□ -0.61
SUPT20H-223	ENST00000497318	KRTAP29-1	A8MX34	341 aa	Predicted RBP	11.25	□□□□□ -0.61
SUPT20H-223	ENST00000497318	SCGB1D2	O95969	90 aa		11.25	□□□□□ -0.61
SUPT20H-223	ENST00000497318	PLA2G1B	P04054	148 aa	Known RBP	11.25	□□□□□ -0.61
SUPT20H-223	ENST00000497318	METTL15P1	P0C7V9	234 aa		11.25	□□□□□ -0.61
SUPT20H-223	ENST00000497318	ARL16	Q0P5N6	197 aa		11.25	□□□□□ -0.61
SUPT20H-223	ENST00000497318	MRPL23	Q16540	153 aa	Known RBP	11.25	□□□□□ -0.61
SUPT20H-223	ENST00000497318	SPANXN2	Q5MJ10	180 aa		11.25	□□□□□ -0.61
SUPT20H-223	ENST00000497318	LYPD5	Q6UWN5	251 aa		11.25	□□□□□ -0.61
SUPT20H-223	ENST00000497318	NTN5	Q8WTR8	489 aa	Predicted RBP	11.25	□□□□□ -0.61
SUPT20H-223	ENST00000497318	DEDD2	Q8WXF8	326 aa		11.25	□□□□□ -0.61
SUPT20H-223	ENST00000497318	PARD6G	Q9BYG4	376 aa	Predicted RBP	11.25	□□□□□ -0.61
SUPT20H-223	ENST00000497318	GSN-AS1	Q9NRJ2	163 aa		11.25	□□□□□ -0.61
SUPT20H-223	ENST00000497318		J3KRW8	73 aa		11.24	□□□□□ -0.61
SUPT20H-223	ENST00000497318	HAMP	P81172	84 aa		11.24	□□□□□ -0.61
SUPT20H-223	ENST00000497318	PXDC1	Q5TGL8	231 aa		11.24	□□□□□ -0.61
SUPT20H-223	ENST00000497318	TRIQK	Q629K1	86 aa		11.24	□□□□□ -0.61
SUPT20H-223	ENST00000497318	TMEM14EP	Q6UXP3	125 aa		11.24	□□□□□ -0.61
SUPT20H-223	ENST00000497318	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	11.24	□□□□□ -0.61
SUPT20H-223	ENST00000497318	SMIM8	Q96KF7	97 aa		11.24	□□□□□ -0.61
SUPT20H-223	ENST00000497318	ODF3	Q96PU9	254 aa		11.24	□□□□□ -0.61
SUPT20H-223	ENST00000497318	LINC00467	Q9BRT7	94 aa		11.24	□□□□□ -0.61
SUPT20H-223	ENST00000497318	ARL6	Q9H0F7	186 aa		11.24	□□□□□ -0.61
SUPT20H-223	ENST00000497318	PRO0255	Q9UI72	69 aa		11.24	□□□□□ -0.61
SUPT20H-223	ENST00000497318	CCS	O14618	274 aa		11.23	□□□□□ -0.61
SUPT20H-223	ENST00000497318	INPP1	P49441	399 aa		11.23	□□□□□ -0.61
SUPT20H-223	ENST00000497318	SLC38A11	Q08AI6	406 aa		11.23	□□□□□ -0.61
SUPT20H-223	ENST00000497318	C4orf46	Q504U0	113 aa		11.23	□□□□□ -0.61
SUPT20H-223	ENST00000497318	NEGR1	Q7Z3B1	354 aa		11.23	□□□□□ -0.61
SUPT20H-223	ENST00000497318	BPIFA4P	Q86YQ2	179 aa		11.23	□□□□□ -0.61
SUPT20H-223	ENST00000497318	RCL1	Q9Y2P8	373 aa	Known RBP	11.23	□□□□□ -0.61
SUPT20H-223	ENST00000497318	PXMP4	Q9Y6I8	212 aa		11.23	□□□□□ -0.61
SUPT20H-223	ENST00000497318	MRPS12	O15235	138 aa	Known RBP	11.22	□□□□□ -0.61
SUPT20H-223	ENST00000497318	IAH1	Q2TAA2	248 aa	Predicted RBP	11.22	□□□□□ -0.61
SUPT20H-223	ENST00000497318	C10orf126	Q8N4M7	172 aa		11.22	□□□□□ -0.61
SUPT20H-223	ENST00000497318	ZNF431	Q8TF32	576 aa	Predicted RBP	11.22	□□□□□ -0.61
SUPT20H-223	ENST00000497318	ST6GAL2	Q96JF0	529 aa		11.22	□□□□□ -0.61
SUPT20H-223	ENST00000497318	ARV1	Q9H2C2	271 aa		11.22	□□□□□ -0.61
SUPT20H-223	ENST00000497318	GSKIP	Q9P0R6	139 aa		11.22	□□□□□ -0.61
SUPT20H-223	ENST00000497318	HHLA3	Q9XRX5	114 aa		11.22	□□□□□ -0.61
SUPT20H-223	ENST00000497318	NAP1L6	A6NFF2	107 aa		11.21	□□□□□ -0.61
SUPT20H-223	ENST00000497318	PRAC2	D3DTV9	90 aa		11.21	□□□□□ -0.61
SUPT20H-223	ENST00000497318		H3BTX0	84 aa		11.21	□□□□□ -0.61
SUPT20H-223	ENST00000497318	PSCA	O43653	123 aa		11.21	□□□□□ -0.61
SUPT20H-223	ENST00000497318	SLC25A5	P05141	298 aa	Known RBP	11.21	□□□□□ -0.61
SUPT20H-223	ENST00000497318	CT45A10	P0DMU9	189 aa		11.21	□□□□□ -0.61
SUPT20H-223	ENST00000497318	IL7	P13232	177 aa		11.21	□□□□□ -0.61
SUPT20H-223	ENST00000497318	DEFB104A	Q8WTQ1	72 aa		11.21	□□□□□ -0.61
SUPT20H-223	ENST00000497318	PLA2G10	O15496	165 aa		11.2	□□□□□ -0.62
SUPT20H-223	ENST00000497318	MBP	P02686	304 aa	Predicted RBP	11.2	□□□□□ -0.62
SUPT20H-223	ENST00000497318	ANXA2R	Q3ZCQ2	193 aa		11.2	□□□□□ -0.62
SUPT20H-223	ENST00000497318	MORN5	Q5VZ52	161 aa		11.2	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 173.3 ms