RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 ASCC3Q8N3C0 2202 aaKnown RBP1□□□□□ -2.25
SMC4-225ENST00000497203 RTL9Q8NET4 1388 aa0.99□□□□□ -2.25
SMC4-225ENST00000497203 KPNA4O00629 521 aaPredicted RBP0.99□□□□□ -2.25
SMC4-225ENST00000497203 TMEM78Q5T7P6 136 aa0.99□□□□□ -2.25
SMC4-225ENST00000497203 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.99□□□□□ -2.25
SMC4-225ENST00000497203 CCDC32Q9BV29 185 aa0.99□□□□□ -2.25
SMC4-225ENST00000497203 TCEAL2Q9H3H9 227 aaPredicted RBP0.99□□□□□ -2.25
SMC4-225ENST00000497203 OTORQ9NRC9 128 aa0.99□□□□□ -2.25
SMC4-225ENST00000497203 LAMTOR2Q9Y2Q5 125 aa0.99□□□□□ -2.25
SMC4-225ENST00000497203 COL24A1Q17RW2 1714 aa0.98□□□□□ -2.25
SMC4-225ENST00000497203 A0A096LPI6 279 aa0.98□□□□□ -2.25
SMC4-225ENST00000497203 A0A1B0GV72 72 aa0.98□□□□□ -2.25
SMC4-225ENST00000497203 E7EQ34 232 aa0.98□□□□□ -2.25
SMC4-225ENST00000497203 FABP1P07148 127 aa0.98□□□□□ -2.25
SMC4-225ENST00000497203 PSMF1Q92530 271 aa0.98□□□□□ -2.25
SMC4-225ENST00000497203 NAT8BQ9UHF3 227 aa0.98□□□□□ -2.25
SMC4-225ENST00000497203 LAMA4Q16363 1823 aa0.98□□□□□ -2.25
SMC4-225ENST00000497203 TECPR2O15040 1411 aa0.98□□□□□ -2.25
SMC4-225ENST00000497203 TRAPPC8Q9Y2L5 1435 aa0.98□□□□□ -2.25
SMC4-225ENST00000497203 FRMPD1Q5SYB0 1578 aa0.97□□□□□ -2.25
SMC4-225ENST00000497203 CNTRLQ7Z7A1 2325 aa0.97□□□□□ -2.25
SMC4-225ENST00000497203 TRDV1A0A1B0GX56 115 aa0.97□□□□□ -2.25
SMC4-225ENST00000497203 JMJD7-PLA2G4BH0Y9G9 81 aa0.97□□□□□ -2.25
SMC4-225ENST00000497203 MT-ND6P03923 174 aa0.97□□□□□ -2.25
SMC4-225ENST00000497203 BCL2P10415 239 aa0.97□□□□□ -2.25
SMC4-225ENST00000497203 MRPS36P82909 103 aaKnown RBP0.97□□□□□ -2.25
SMC4-225ENST00000497203 ANGPTL5Q86XS5 388 aa0.97□□□□□ -2.25
SMC4-225ENST00000497203 OR4B1Q8NGF8 309 aa0.97□□□□□ -2.25
SMC4-225ENST00000497203 ZC2HC1AQ96GY0 325 aa0.97□□□□□ -2.25
SMC4-225ENST00000497203 CARD19Q96LW7 228 aa0.97□□□□□ -2.25
SMC4-225ENST00000497203 C9orf170A2RU37 121 aa0.96□□□□□ -2.26
SMC4-225ENST00000497203 C5orf67F2Z3F1 127 aa0.96□□□□□ -2.26
SMC4-225ENST00000497203 FAM107AO95990 144 aa0.96□□□□□ -2.26
SMC4-225ENST00000497203 PPYP01298 95 aa0.96□□□□□ -2.26
SMC4-225ENST00000497203 NDUFA6P56556 154 aa0.96□□□□□ -2.26
SMC4-225ENST00000497203 LRTM1Q9HBL6 345 aa0.96□□□□□ -2.26
SMC4-225ENST00000497203 TPRKBQ9Y3C4 175 aa0.96□□□□□ -2.26
SMC4-225ENST00000497203 COL1A1P02452 1464 aaPredicted RBP0.96□□□□□ -2.26
SMC4-225ENST00000497203 KIAA1107Q9UPP5 1409 aa0.96□□□□□ -2.26
SMC4-225ENST00000497203 NUP210Q8TEM1 1887 aaPredicted RBP0.95□□□□□ -2.26
SMC4-225ENST00000497203 A0A1W2PPM0 123 aa0.95□□□□□ -2.26
SMC4-225ENST00000497203 FABP2P12104 132 aa0.95□□□□□ -2.26
SMC4-225ENST00000497203 EFNA4P52798 201 aa0.95□□□□□ -2.26
SMC4-225ENST00000497203 TFAMQ00059 246 aaKnown RBP0.95□□□□□ -2.26
SMC4-225ENST00000497203 PRB3Q04118 309 aaPredicted RBP0.95□□□□□ -2.26
SMC4-225ENST00000497203 SPATA45Q537H7 98 aa0.95□□□□□ -2.26
SMC4-225ENST00000497203 LINC00575Q6W349 94 aa0.95□□□□□ -2.26
SMC4-225ENST00000497203 Q8N6K4 173 aa0.95□□□□□ -2.26
SMC4-225ENST00000497203 OR4C12Q96R67 309 aa0.95□□□□□ -2.26
SMC4-225ENST00000497203 SELENOSQ9BQE4 189 aa0.95□□□□□ -2.26
SMC4-225ENST00000497203 EFCAB11Q9BUY7 163 aa0.95□□□□□ -2.26
SMC4-225ENST00000497203 CST11Q9H112 138 aa0.95□□□□□ -2.26
SMC4-225ENST00000497203 SMPXQ9UHP9 88 aa0.95□□□□□ -2.26
SMC4-225ENST00000497203 A0A1W2PRE2 83 aa0.94□□□□□ -2.26
SMC4-225ENST00000497203 GABARAPH6UMI1 98 aa0.94□□□□□ -2.26
SMC4-225ENST00000497203 IGLV3-1P01715 115 aa0.94□□□□□ -2.26
SMC4-225ENST00000497203 IGHV3-33P01772 117 aa0.94□□□□□ -2.26
SMC4-225ENST00000497203 FABP4P15090 132 aa0.94□□□□□ -2.26
SMC4-225ENST00000497203 S100A11P31949 105 aa0.94□□□□□ -2.26
SMC4-225ENST00000497203 SDC2P34741 201 aa0.94□□□□□ -2.26
SMC4-225ENST00000497203 VMA21Q3ZAQ7 101 aa0.94□□□□□ -2.26
SMC4-225ENST00000497203 WFDC10AQ9H1F0 79 aa0.94□□□□□ -2.26
SMC4-225ENST00000497203 ANKRD31Q8N7Z5 1873 aa0.94□□□□□ -2.26
SMC4-225ENST00000497203 C5orf58C9J3I9 102 aa0.93□□□□□ -2.26
SMC4-225ENST00000497203 IFNA21P01568 189 aa0.93□□□□□ -2.26
SMC4-225ENST00000497203 MIR22HGQ0VDD5 57 aa0.93□□□□□ -2.26
SMC4-225ENST00000497203 DIAPH2-AS1Q14236 149 aa0.93□□□□□ -2.26
SMC4-225ENST00000497203 FOXI2Q6ZQN5 318 aa0.93□□□□□ -2.26
SMC4-225ENST00000497203 LINC00299Q6ZSB3 139 aa0.93□□□□□ -2.26
SMC4-225ENST00000497203 ZGRF1Q86YA3 2104 aa0.93□□□□□ -2.26
SMC4-225ENST00000497203 OR5H6Q8NGV6 325 aa0.93□□□□□ -2.26
SMC4-225ENST00000497203 OR10AC1Q8NH08 325 aa0.93□□□□□ -2.26
SMC4-225ENST00000497203 DIRC1Q969H9 104 aa0.93□□□□□ -2.26
SMC4-225ENST00000497203 PBRM1Q86U86 1689 aa0.92□□□□□ -2.26
SMC4-225ENST00000497203 TRAV23DV6A0A075B6W5 121 aa0.92□□□□□ -2.26
SMC4-225ENST00000497203 H7BYZ3 331 aa0.92□□□□□ -2.26
SMC4-225ENST00000497203 PGRMC1O00264 195 aaKnown RBP0.92□□□□□ -2.26
SMC4-225ENST00000497203 TRACP01848 142 aa0.92□□□□□ -2.26
SMC4-225ENST00000497203 TOMM20LQ6UXN7 152 aa0.92□□□□□ -2.26
SMC4-225ENST00000497203 LINC00269Q8N2A0 174 aa0.92□□□□□ -2.26
SMC4-225ENST00000497203 OR5AK2Q8NH90 309 aa0.92□□□□□ -2.26
SMC4-225ENST00000497203 CCL4L1Q8NHW4 92 aa0.92□□□□□ -2.26
SMC4-225ENST00000497203 THEM6Q8WUY1 208 aa0.92□□□□□ -2.26
SMC4-225ENST00000497203 PRELID3AQ96N28 172 aa0.92□□□□□ -2.26
SMC4-225ENST00000497203 LXNQ9BS40 222 aa0.92□□□□□ -2.26
SMC4-225ENST00000497203 FANCMQ8IYD8 2048 aa0.92□□□□□ -2.26
SMC4-225ENST00000497203 TET1Q8NFU7 2136 aa0.92□□□□□ -2.26
SMC4-225ENST00000497203 PHRF1Q9P1Y6 1649 aaKnown RBP0.92□□□□□ -2.26
SMC4-225ENST00000497203 ERBINQ96RT1 1412 aa0.91□□□□□ -2.26
SMC4-225ENST00000497203 ZFC3H1O60293 1989 aaKnown RBP0.91□□□□□ -2.26
SMC4-225ENST00000497203 TPT1P13693 172 aaKnown RBP0.91□□□□□ -2.26
SMC4-225ENST00000497203 SMIM15Q7Z3B0 74 aa0.91□□□□□ -2.26
SMC4-225ENST00000497203 LINC00305Q7Z4B0 112 aa0.91□□□□□ -2.26
SMC4-225ENST00000497203 RMND5BQ96G75 393 aaPredicted RBP0.91□□□□□ -2.26
SMC4-225ENST00000497203 DDA1Q9BW61 102 aa0.91□□□□□ -2.26
SMC4-225ENST00000497203 PTPRDP23468 1912 aa0.9□□□□□ -2.27
SMC4-225ENST00000497203 CITO14578 2027 aa0.9□□□□□ -2.27
SMC4-225ENST00000497203 SRP9P49458 86 aaKnown RBP0.9□□□□□ -2.27
SMC4-225ENST00000497203 OR9Q1Q8NGQ5 310 aa0.9□□□□□ -2.27
SMC4-225ENST00000497203 GRPEL2Q8TAA5 225 aa0.9□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms