RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 UPK3BQ9BT76 320 aa2.36□□□□□ -2.03
SNRNP48-202ENST00000496946 NHP2Q9NX24 153 aaKnown RBP2.36□□□□□ -2.03
SNRNP48-202ENST00000496946 EPDR1Q9UM22 224 aa2.36□□□□□ -2.03
SNRNP48-202ENST00000496946 EXPH5Q8NEV8 1989 aa2.36□□□□□ -2.03
SNRNP48-202ENST00000496946 HCFC1P51610 2035 aa2.36□□□□□ -2.03
SNRNP48-202ENST00000496946 IGKV1D-8A0A087WSZ0 117 aa2.36□□□□□ -2.03
SNRNP48-202ENST00000496946 TRAV8-3A0A0A6YYJ7 113 aa2.36□□□□□ -2.03
SNRNP48-202ENST00000496946 C4orf51C9J302 202 aa2.36□□□□□ -2.03
SNRNP48-202ENST00000496946 WNT9BO14905 357 aa2.36□□□□□ -2.03
SNRNP48-202ENST00000496946 EFNA4P52798 201 aa2.36□□□□□ -2.03
SNRNP48-202ENST00000496946 PCBD1P61457 104 aa2.36□□□□□ -2.03
SNRNP48-202ENST00000496946 HBBP68871 147 aa2.36□□□□□ -2.03
SNRNP48-202ENST00000496946 FAM219BQ5XKK7 198 aa2.36□□□□□ -2.03
SNRNP48-202ENST00000496946 FAM19A3Q7Z5A8 133 aa2.36□□□□□ -2.03
SNRNP48-202ENST00000496946 MKXQ8IYA7 352 aa2.36□□□□□ -2.03
SNRNP48-202ENST00000496946 C6orf223Q8N319 242 aa2.36□□□□□ -2.03
SNRNP48-202ENST00000496946 KCPQ6ZWJ8 1503 aa2.36□□□□□ -2.03
SNRNP48-202ENST00000496946 SCN2AQ99250 2005 aa2.35□□□□□ -2.03
SNRNP48-202ENST00000496946 BTAF1O14981 1849 aa2.35□□□□□ -2.03
SNRNP48-202ENST00000496946 KIDINS220Q9ULH0 1771 aa2.35□□□□□ -2.03
SNRNP48-202ENST00000496946 TRBV20OR9-2A0A075B6H5 130 aa2.35□□□□□ -2.03
SNRNP48-202ENST00000496946 IGLV1-36A0A0B4J1U3 117 aa2.35□□□□□ -2.03
SNRNP48-202ENST00000496946 CEBPZOSA8MTT3 80 aa2.35□□□□□ -2.03
SNRNP48-202ENST00000496946 TMEM256-PLSCR3K7ERE1 68 aa2.35□□□□□ -2.03
SNRNP48-202ENST00000496946 FFAR1O14842 300 aa2.35□□□□□ -2.03
SNRNP48-202ENST00000496946 ZNHIT1O43257 154 aa2.35□□□□□ -2.03
SNRNP48-202ENST00000496946 TIMM17BO60830 172 aa2.35□□□□□ -2.03
SNRNP48-202ENST00000496946 IL4P05112 153 aa2.35□□□□□ -2.03
SNRNP48-202ENST00000496946 ACYP1P07311 99 aa2.35□□□□□ -2.03
SNRNP48-202ENST00000496946 ZNF823P16415 610 aa2.35□□□□□ -2.03
SNRNP48-202ENST00000496946 GCHFRP30047 84 aa2.35□□□□□ -2.03
SNRNP48-202ENST00000496946 FXYD2P54710 66 aa2.35□□□□□ -2.03
SNRNP48-202ENST00000496946 ATP5EP56381 51 aaPredicted RBP2.35□□□□□ -2.03
SNRNP48-202ENST00000496946 HIST1H4AP62805 103 aaKnown RBP2.35□□□□□ -2.03
SNRNP48-202ENST00000496946 ADIGQ0VDE8 80 aa2.35□□□□□ -2.03
SNRNP48-202ENST00000496946 ZNF56Q15929 161 aa2.35□□□□□ -2.03
SNRNP48-202ENST00000496946 IL17AQ16552 155 aa2.35□□□□□ -2.03
SNRNP48-202ENST00000496946 TMEM170BQ5T4T1 132 aa2.35□□□□□ -2.03
SNRNP48-202ENST00000496946 RUSC1-AS1Q66K80 236 aa2.35□□□□□ -2.03
SNRNP48-202ENST00000496946 LCA10Q71F78 164 aa2.35□□□□□ -2.03
SNRNP48-202ENST00000496946 TMEM252Q8N6L7 170 aa2.35□□□□□ -2.03
SNRNP48-202ENST00000496946 LINC01600Q96MT4 127 aa2.35□□□□□ -2.03
SNRNP48-202ENST00000496946 TIMM17AQ99595 171 aa2.35□□□□□ -2.03
SNRNP48-202ENST00000496946 IL36BQ9NZH7 164 aa2.35□□□□□ -2.03
SNRNP48-202ENST00000496946 PHF3Q92576 2039 aaKnown RBP2.35□□□□□ -2.03
SNRNP48-202ENST00000496946 THSD7AQ9UPZ6 1657 aa2.35□□□□□ -2.03
SNRNP48-202ENST00000496946 ADGRB1O14514 1584 aa2.35□□□□□ -2.03
SNRNP48-202ENST00000496946 A8MUN3 132 aa2.35□□□□□ -2.03
SNRNP48-202ENST00000496946 K7ERJ3 54 aa2.35□□□□□ -2.03
SNRNP48-202ENST00000496946 M0R381 172 aa2.35□□□□□ -2.03
SNRNP48-202ENST00000496946 LST1O00453 97 aa2.35□□□□□ -2.03
SNRNP48-202ENST00000496946 CCL16O15467 120 aa2.35□□□□□ -2.03
SNRNP48-202ENST00000496946 CSRP3P50461 194 aa2.35□□□□□ -2.03
SNRNP48-202ENST00000496946 RPL30P62888 115 aaKnown RBP2.35□□□□□ -2.03
SNRNP48-202ENST00000496946 INSL4Q14641 139 aa2.35□□□□□ -2.03
SNRNP48-202ENST00000496946 SS18Q15532 418 aa2.35□□□□□ -2.03
SNRNP48-202ENST00000496946 Q6P435 159 aa2.35□□□□□ -2.03
SNRNP48-202ENST00000496946 MORN4Q8NDC4 146 aa2.35□□□□□ -2.03
SNRNP48-202ENST00000496946 FAM3DQ96BQ1 224 aa2.35□□□□□ -2.03
SNRNP48-202ENST00000496946 TRGV9Q99603 122 aa2.35□□□□□ -2.03
SNRNP48-202ENST00000496946 TMEM243Q9BU79 118 aa2.35□□□□□ -2.03
SNRNP48-202ENST00000496946 MAP6D1Q9H9H5 199 aa2.35□□□□□ -2.03
SNRNP48-202ENST00000496946 MIA3Q5JRA6 1907 aa2.34□□□□□ -2.03
SNRNP48-202ENST00000496946 LOC100131303A0A0U1RQF7 123 aa2.34□□□□□ -2.03
SNRNP48-202ENST00000496946 A0A1B0GVT2 93 aa2.34□□□□□ -2.03
SNRNP48-202ENST00000496946 TCRBV4S1A1TA0A5B7 111 aa2.34□□□□□ -2.03
SNRNP48-202ENST00000496946 H0Y9J4 135 aa2.34□□□□□ -2.03
SNRNP48-202ENST00000496946 LEPROTL1O95214 131 aa2.34□□□□□ -2.03
SNRNP48-202ENST00000496946 INAFM2P0DMQ5 153 aa2.34□□□□□ -2.03
SNRNP48-202ENST00000496946 PSMB2P49721 201 aa2.34□□□□□ -2.03
SNRNP48-202ENST00000496946 SYNJ2BPP57105 145 aa2.34□□□□□ -2.03
SNRNP48-202ENST00000496946 FHL1Q13642 323 aa2.34□□□□□ -2.03
SNRNP48-202ENST00000496946 CEMP1Q6PRD7 247 aaPredicted RBP2.34□□□□□ -2.03
SNRNP48-202ENST00000496946 C5orf38Q86SI9 138 aa2.34□□□□□ -2.03
SNRNP48-202ENST00000496946 LINC00643Q86TS7 51 aa2.34□□□□□ -2.03
SNRNP48-202ENST00000496946 PRSS33Q8NF86 280 aa2.34□□□□□ -2.03
SNRNP48-202ENST00000496946 TAF15Q92804 592 aaKnown RBP eCLIP2.34□□□□□ -2.03
SNRNP48-202ENST00000496946 TOMM6Q96B49 74 aa2.34□□□□□ -2.03
SNRNP48-202ENST00000496946 CHCHD1Q96BP2 118 aaKnown RBP2.34□□□□□ -2.03
SNRNP48-202ENST00000496946 CALYQ9NYX4 217 aa2.34□□□□□ -2.03
SNRNP48-202ENST00000496946 CTSZQ9UBR2 303 aa2.34□□□□□ -2.03
SNRNP48-202ENST00000496946 DYSFO75923 2080 aa2.34□□□□□ -2.03
SNRNP48-202ENST00000496946 DOCK8Q8NF50 2099 aa2.34□□□□□ -2.03
SNRNP48-202ENST00000496946 DOCK4Q8N1I0 1966 aa2.34□□□□□ -2.03
SNRNP48-202ENST00000496946 GTF3C1Q12789 2109 aa2.34□□□□□ -2.04
SNRNP48-202ENST00000496946 TRBV5-3A0A0A0MS03 114 aa2.34□□□□□ -2.04
SNRNP48-202ENST00000496946 HBDP02042 147 aa2.34□□□□□ -2.04
SNRNP48-202ENST00000496946 SLC25A16P16260 332 aa2.34□□□□□ -2.04
SNRNP48-202ENST00000496946 AQP1P29972 269 aa2.34□□□□□ -2.04
SNRNP48-202ENST00000496946 ZNF80P51504 273 aaPredicted RBP2.34□□□□□ -2.04
SNRNP48-202ENST00000496946 ZNF136P52737 540 aa2.34□□□□□ -2.04
SNRNP48-202ENST00000496946 MP68P56378 58 aa2.34□□□□□ -2.04
SNRNP48-202ENST00000496946 NANOS2P60321 138 aaKnown RBP2.34□□□□□ -2.04
SNRNP48-202ENST00000496946 TMEM155Q4W5P6 130 aa2.34□□□□□ -2.04
SNRNP48-202ENST00000496946 ZNF329Q86UD4 541 aa2.34□□□□□ -2.04
SNRNP48-202ENST00000496946 CXCL16Q9H2A7 254 aa2.34□□□□□ -2.04
SNRNP48-202ENST00000496946 SLC25A15Q9Y619 301 aa2.34□□□□□ -2.04
SNRNP48-202ENST00000496946 NYNRINQ9P2P1 1898 aaKnown RBP2.34□□□□□ -2.04
SNRNP48-202ENST00000496946 ARFGEF1Q9Y6D6 1849 aa2.33□□□□□ -2.04
SNRNP48-202ENST00000496946 FER1L5A0AVI2 2057 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms