RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 TIMM17BO60830 172 aa2.51□□□□□ -2.01
SNX13-211ENST00000496855 IGLV1-51P01701 117 aa2.51□□□□□ -2.01
SNX13-211ENST00000496855 MT-ND6P03923 174 aa2.51□□□□□ -2.01
SNX13-211ENST00000496855 NFYAP23511 347 aaPredicted RBP2.51□□□□□ -2.01
SNX13-211ENST00000496855 COPZ1P61923 177 aa2.51□□□□□ -2.01
SNX13-211ENST00000496855 ZNF181Q2M3W8 571 aa2.51□□□□□ -2.01
SNX13-211ENST00000496855 HSD17B12Q53GQ0 312 aa2.51□□□□□ -2.01
SNX13-211ENST00000496855 DPPA3Q6W0C5 159 aa2.51□□□□□ -2.01
SNX13-211ENST00000496855 IDO2Q6ZQW0 420 aa2.51□□□□□ -2.01
SNX13-211ENST00000496855 C14orf144Q96I85 54 aa2.51□□□□□ -2.01
SNX13-211ENST00000496855 UNC13BO14795 1591 aa2.51□□□□□ -2.01
SNX13-211ENST00000496855 POLEQ07864 2286 aa2.5□□□□□ -2.01
SNX13-211ENST00000496855 CPAMD8Q8IZJ3 1885 aa2.5□□□□□ -2.01
SNX13-211ENST00000496855 ARHGAP32A7KAX9 2087 aa2.5□□□□□ -2.01
SNX13-211ENST00000496855 CHD8Q9HCK8 2581 aa2.5□□□□□ -2.01
SNX13-211ENST00000496855 KMT2BQ9UMN6 2715 aaPredicted RBP2.5□□□□□ -2.01
SNX13-211ENST00000496855 SPAARA0A1B0GVQ0 90 aa2.5□□□□□ -2.01
SNX13-211ENST00000496855 C7orf71A4D174 169 aa2.5□□□□□ -2.01
SNX13-211ENST00000496855 ZNF670-ZNF695F2Z2N8 137 aa2.5□□□□□ -2.01
SNX13-211ENST00000496855 COX6A1P12074 109 aa2.5□□□□□ -2.01
SNX13-211ENST00000496855 AQP4P55087 323 aa2.5□□□□□ -2.01
SNX13-211ENST00000496855 KLRD1Q13241 179 aa2.5□□□□□ -2.01
SNX13-211ENST00000496855 HES1Q14469 280 aa2.5□□□□□ -2.01
SNX13-211ENST00000496855 ARHGAP31Q2M1Z3 1444 aa2.5□□□□□ -2.01
SNX13-211ENST00000496855 ZNF791Q3KP31 576 aaPredicted RBP2.5□□□□□ -2.01
SNX13-211ENST00000496855 KRTAP13-2Q52LG2 175 aa2.5□□□□□ -2.01
SNX13-211ENST00000496855 OCIAD2Q56VL3 154 aa2.5□□□□□ -2.01
SNX13-211ENST00000496855 SLC35E3Q7Z769 313 aa2.5□□□□□ -2.01
SNX13-211ENST00000496855 LINC00311Q8N616 119 aa2.5□□□□□ -2.01
SNX13-211ENST00000496855 OR5D16Q8NGK9 328 aa2.5□□□□□ -2.01
SNX13-211ENST00000496855 FKBP11Q9NYL4 201 aa2.5□□□□□ -2.01
SNX13-211ENST00000496855 MYO5AQ9Y4I1 1855 aaKnown RBP2.5□□□□□ -2.01
SNX13-211ENST00000496855 OR51F1A6NGY5 319 aa2.49□□□□□ -2.01
SNX13-211ENST00000496855 M0R129 80 aa2.49□□□□□ -2.01
SNX13-211ENST00000496855 SMIM24O75264 130 aa2.49□□□□□ -2.01
SNX13-211ENST00000496855 ZNF737O75373 536 aa2.49□□□□□ -2.01
SNX13-211ENST00000496855 ROMO1P60602 79 aa2.49□□□□□ -2.01
SNX13-211ENST00000496855 CDK5R1Q15078 307 aa2.49□□□□□ -2.01
SNX13-211ENST00000496855 AAED1Q7RTV5 226 aa2.49□□□□□ -2.01
SNX13-211ENST00000496855 TMEM203Q969S6 136 aa2.49□□□□□ -2.01
SNX13-211ENST00000496855 C20orf166-AS1Q96NR2 134 aa2.49□□□□□ -2.01
SNX13-211ENST00000496855 RETNLBQ9BQ08 111 aa2.49□□□□□ -2.01
SNX13-211ENST00000496855 HIGD2AQ9BW72 106 aa2.49□□□□□ -2.01
SNX13-211ENST00000496855 COA4Q9NYJ1 87 aa2.49□□□□□ -2.01
SNX13-211ENST00000496855 SHANK1Q9Y566 2161 aa2.49□□□□□ -2.01
SNX13-211ENST00000496855 PIK3C2AO00443 1686 aa2.49□□□□□ -2.01
SNX13-211ENST00000496855 SPTBN5Q9NRC6 3674 aaKnown RBP2.49□□□□□ -2.01
SNX13-211ENST00000496855 DLC1Q96QB1 1528 aa2.49□□□□□ -2.01
SNX13-211ENST00000496855 RIC1Q4ADV7 1423 aa2.48□□□□□ -2.01
SNX13-211ENST00000496855 FGD6Q6ZV73 1430 aa2.48□□□□□ -2.01
SNX13-211ENST00000496855 SMG6Q86US8 1419 aaKnown RBP2.48□□□□□ -2.01
SNX13-211ENST00000496855 A8MWV9 139 aa2.48□□□□□ -2.01
SNX13-211ENST00000496855 J3QR89 54 aa2.48□□□□□ -2.01
SNX13-211ENST00000496855 SDCBPO00560 298 aaPredicted RBP2.48□□□□□ -2.01
SNX13-211ENST00000496855 PABPC1L2AQ5JQF8 200 aa2.48□□□□□ -2.01
SNX13-211ENST00000496855 SCIMPQ6UWF3 145 aa2.48□□□□□ -2.01
SNX13-211ENST00000496855 TMEM91Q6ZNR0 172 aa2.48□□□□□ -2.01
SNX13-211ENST00000496855 C9orf163Q8N9P6 203 aa2.48□□□□□ -2.01
SNX13-211ENST00000496855 CCL4L1Q8NHW4 92 aa2.48□□□□□ -2.01
SNX13-211ENST00000496855 COMMD3Q9UBI1 195 aa2.48□□□□□ -2.01
SNX13-211ENST00000496855 DNAJC15Q9Y5T4 150 aa2.48□□□□□ -2.01
SNX13-211ENST00000496855 MBD5Q9P267 1494 aa2.48□□□□□ -2.01
SNX13-211ENST00000496855 EYSQ5T1H1 3165 aa2.48□□□□□ -2.01
SNX13-211ENST00000496855 CCDC88CQ9P219 2028 aa2.48□□□□□ -2.01
SNX13-211ENST00000496855 ANAPC1Q9H1A4 1944 aa2.47□□□□□ -2.01
SNX13-211ENST00000496855 NALCNQ8IZF0 1738 aa2.47□□□□□ -2.01
SNX13-211ENST00000496855 IGHV3-64A0A075B6Q5 118 aa2.47□□□□□ -2.01
SNX13-211ENST00000496855 TRAV27A0A087WT01 109 aa2.47□□□□□ -2.01
SNX13-211ENST00000496855 IGKV2D-26A0A0A0MRZ7 120 aa2.47□□□□□ -2.01
SNX13-211ENST00000496855 UQCRQO14949 82 aa2.47□□□□□ -2.01
SNX13-211ENST00000496855 SYNGR2O43760 224 aa2.47□□□□□ -2.01
SNX13-211ENST00000496855 TRGC1P0CF51 173 aa2.47□□□□□ -2.01
SNX13-211ENST00000496855 SNRPD3P62318 126 aaKnown RBP2.47□□□□□ -2.01
SNX13-211ENST00000496855 MYL5Q02045 173 aa2.47□□□□□ -2.01
SNX13-211ENST00000496855 TMEM155Q4W5P6 130 aa2.47□□□□□ -2.01
SNX13-211ENST00000496855 RPS19BP1Q86WX3 136 aaKnown RBP2.47□□□□□ -2.01
SNX13-211ENST00000496855 FAM216BQ8N7L0 139 aa2.47□□□□□ -2.01
SNX13-211ENST00000496855 Q8N814 137 aa2.47□□□□□ -2.01
SNX13-211ENST00000496855 CHCHD1Q96BP2 118 aaKnown RBP2.47□□□□□ -2.01
SNX13-211ENST00000496855 GNG8Q9UK08 70 aa2.47□□□□□ -2.01
SNX13-211ENST00000496855 FANCMQ8IYD8 2048 aa2.47□□□□□ -2.01
SNX13-211ENST00000496855 MYO3AQ8NEV4 1616 aa2.47□□□□□ -2.01
SNX13-211ENST00000496855 LAMB4A4D0S4 1761 aa2.47□□□□□ -2.01
SNX13-211ENST00000496855 GPR179Q6PRD1 2367 aa2.46□□□□□ -2.01
SNX13-211ENST00000496855 MUC21A0A0G2JKD1 596 aa2.46□□□□□ -2.02
SNX13-211ENST00000496855 MUC21A0A140T8X8 626 aa2.46□□□□□ -2.02
SNX13-211ENST00000496855 PSCAO43653 123 aa2.46□□□□□ -2.02
SNX13-211ENST00000496855 OR1I1O60431 355 aa2.46□□□□□ -2.02
SNX13-211ENST00000496855 NCR2O95944 276 aa2.46□□□□□ -2.02
SNX13-211ENST00000496855 HBDP02042 147 aa2.46□□□□□ -2.02
SNX13-211ENST00000496855 IFNA4P05014 189 aa2.46□□□□□ -2.02
SNX13-211ENST00000496855 ZNF705BP0CI00 300 aaPredicted RBP2.46□□□□□ -2.02
SNX13-211ENST00000496855 HLA-DRB4P13762 266 aa2.46□□□□□ -2.02
SNX13-211ENST00000496855 ZNF93P35789 620 aaPredicted RBP2.46□□□□□ -2.02
SNX13-211ENST00000496855 ESRGQ1W209 222 aa2.46□□□□□ -2.02
SNX13-211ENST00000496855 KIAA2026Q5HYC2 2103 aa2.46□□□□□ -2.02
SNX13-211ENST00000496855 TEN1Q86WV5 123 aa2.46□□□□□ -2.02
SNX13-211ENST00000496855 POP5Q969H6 163 aaKnown RBP2.46□□□□□ -2.02
SNX13-211ENST00000496855 HLA-DRB4X5D2U9 266 aa2.46□□□□□ -2.02
SNX13-211ENST00000496855 HIVEP2P31629 2446 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms