RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 ARL2-SNX15V9GYD0 113 aa16.13■□□□□ 0.17
C9orf3-222ENST00000496567 LINC00862A6NCI5 91 aa16.13■□□□□ 0.17
C9orf3-222ENST00000496567 PGPA6NDG6 321 aa16.13■□□□□ 0.17
C9orf3-222ENST00000496567 CSN1S1P47710 185 aa16.13■□□□□ 0.17
C9orf3-222ENST00000496567 ZNF124Q15973 351 aa16.13■□□□□ 0.17
C9orf3-222ENST00000496567 SLC7A5P1Q8MH63 180 aa16.13■□□□□ 0.17
C9orf3-222ENST00000496567 TUBA4BQ9H853 241 aa16.13■□□□□ 0.17
C9orf3-222ENST00000496567 SRD5A3Q9H8P0 318 aa16.13■□□□□ 0.17
C9orf3-222ENST00000496567 UBE2G2P60604 165 aa16.12■□□□□ 0.17
C9orf3-222ENST00000496567 RXFP4Q8TDU9 374 aa16.12■□□□□ 0.17
C9orf3-222ENST00000496567 SAV1Q9H4B6 383 aaPredicted RBP16.12■□□□□ 0.17
C9orf3-222ENST00000496567 ZNF705FA8MVS1 300 aaPredicted RBP16.11■□□□□ 0.17
C9orf3-222ENST00000496567 K7EIL1 84 aa16.11■□□□□ 0.17
C9orf3-222ENST00000496567 M0R3E3 92 aa16.11■□□□□ 0.17
C9orf3-222ENST00000496567 IGHV4-30-4P0DP06 118 aa16.11■□□□□ 0.17
C9orf3-222ENST00000496567 CCL20P78556 96 aa16.11■□□□□ 0.17
C9orf3-222ENST00000496567 ACTL10Q5JWF8 245 aa16.11■□□□□ 0.17
C9orf3-222ENST00000496567 STHQ8IWL8 128 aa16.11■□□□□ 0.17
C9orf3-222ENST00000496567 LYPD6BQ8NI32 183 aa16.11■□□□□ 0.17
C9orf3-222ENST00000496567 CMTM2Q8TAZ6 248 aa16.11■□□□□ 0.17
C9orf3-222ENST00000496567 CITED4Q96RK1 184 aa16.11■□□□□ 0.17
C9orf3-222ENST00000496567 FAM74A7A6NL05 159 aa16.1■□□□□ 0.17
C9orf3-222ENST00000496567 KNCNA6PVL3 124 aa16.1■□□□□ 0.17
C9orf3-222ENST00000496567 A8MZ25 164 aa16.1■□□□□ 0.17
C9orf3-222ENST00000496567 SUMO1P63165 101 aaKnown RBP16.1■□□□□ 0.17
C9orf3-222ENST00000496567 NDUFA5Q16718 116 aa16.1■□□□□ 0.17
C9orf3-222ENST00000496567 ARL6IP6Q8N6S5 226 aa16.1■□□□□ 0.17
C9orf3-222ENST00000496567 MANBALQ9NQG1 85 aa16.1■□□□□ 0.17
C9orf3-222ENST00000496567 A0A0J9YX75 114 aa16.09■□□□□ 0.17
C9orf3-222ENST00000496567 HLA-DRB4P13762 266 aa16.09■□□□□ 0.17
C9orf3-222ENST00000496567 PMS2P11Q13670 270 aa16.09■□□□□ 0.17
C9orf3-222ENST00000496567 OR8A1Q8NGG7 326 aa16.09■□□□□ 0.17
C9orf3-222ENST00000496567 GNG13Q9P2W3 67 aa16.09■□□□□ 0.17
C9orf3-222ENST00000496567 YTHDF2Q9Y5A9 579 aaKnown RBP16.09■□□□□ 0.17
C9orf3-222ENST00000496567 HLA-DRB4X5D2U9 266 aa16.09■□□□□ 0.17
C9orf3-222ENST00000496567 GGTLC3B5MD39 225 aa16.09■□□□□ 0.17
C9orf3-222ENST00000496567 F6UB75 175 aa16.09■□□□□ 0.17
C9orf3-222ENST00000496567 PAGE4O60829 102 aa16.09■□□□□ 0.17
C9orf3-222ENST00000496567 DUSP14O95147 198 aaKnown RBP16.09■□□□□ 0.17
C9orf3-222ENST00000496567 IFNA1P01562 189 aa16.09■□□□□ 0.17
C9orf3-222ENST00000496567 SLC25A5P05141 298 aaKnown RBP16.09■□□□□ 0.17
C9orf3-222ENST00000496567 DEFB1P60022 68 aa16.09■□□□□ 0.17
C9orf3-222ENST00000496567 COMMD7Q86VX2 200 aa16.09■□□□□ 0.17
C9orf3-222ENST00000496567 C5orf17Q8NAS9 161 aa16.09■□□□□ 0.17
C9orf3-222ENST00000496567 OR10J6PQ8NGY7 276 aa16.09■□□□□ 0.17
C9orf3-222ENST00000496567 H3BMM0 161 aa16.08■□□□□ 0.16
C9orf3-222ENST00000496567 DEFA6Q01524 100 aa16.08■□□□□ 0.16
C9orf3-222ENST00000496567 GDF5OSQ5U4N7 250 aa16.08■□□□□ 0.16
C9orf3-222ENST00000496567 CST9LP1Q5W188 147 aa16.08■□□□□ 0.16
C9orf3-222ENST00000496567 MED9Q9NWA0 146 aa16.08■□□□□ 0.16
C9orf3-222ENST00000496567 PRAC2D3DTV9 90 aa16.07■□□□□ 0.16
C9orf3-222ENST00000496567 DEFB121Q5J5C9 76 aa16.07■□□□□ 0.16
C9orf3-222ENST00000496567 HIST1H1AQ02539 215 aaPredicted RBP16.06■□□□□ 0.16
C9orf3-222ENST00000496567 MRAPQ8TCY5 172 aa16.06■□□□□ 0.16
C9orf3-222ENST00000496567 LOC102724200A0A096LPH7 203 aaPredicted RBP16.05■□□□□ 0.16
C9orf3-222ENST00000496567 DIRC3C9JPN6 131 aa16.05■□□□□ 0.16
C9orf3-222ENST00000496567 TAGLN2P37802 199 aaKnown RBP16.05■□□□□ 0.16
C9orf3-222ENST00000496567 TRPT1Q86TN4 253 aaKnown RBP16.05■□□□□ 0.16
C9orf3-222ENST00000496567 OR4B1Q8NGF8 309 aa16.05■□□□□ 0.16
C9orf3-222ENST00000496567 CLUHP3Q96NS8 147 aa16.05■□□□□ 0.16
C9orf3-222ENST00000496567 TXNDC17Q9BRA2 123 aa16.05■□□□□ 0.16
C9orf3-222ENST00000496567 TCEAL7Q9BRU2 100 aa16.05■□□□□ 0.16
C9orf3-222ENST00000496567 EPDR1Q9UM22 224 aa16.05■□□□□ 0.16
C9orf3-222ENST00000496567 ZNF705DP0CH99 300 aaPredicted RBP16.04■□□□□ 0.16
C9orf3-222ENST00000496567 ZNF705BP0CI00 300 aaPredicted RBP16.04■□□□□ 0.16
C9orf3-222ENST00000496567 CNN1P51911 297 aaKnown RBP16.04■□□□□ 0.16
C9orf3-222ENST00000496567 RPH3ALQ9UNE2 315 aa16.04■□□□□ 0.16
C9orf3-222ENST00000496567 SERTM2A0A1B0GWG4 89 aa16.04■□□□□ 0.16
C9orf3-222ENST00000496567 RBAKDNA6NC62 111 aa16.04■□□□□ 0.16
C9orf3-222ENST00000496567 RBMY1BA6NDE4 496 aaKnown RBP16.04■□□□□ 0.16
C9orf3-222ENST00000496567 RBMY1EA6NEQ0 496 aaKnown RBP16.04■□□□□ 0.16
C9orf3-222ENST00000496567 RBMY1DP0C7P1 496 aaKnown RBP16.04■□□□□ 0.16
C9orf3-222ENST00000496567 PRB4P10163 310 aaPredicted RBP16.04■□□□□ 0.16
C9orf3-222ENST00000496567 RPL35AP18077 110 aaKnown RBP16.04■□□□□ 0.16
C9orf3-222ENST00000496567 CCDC28AQ8IWP9 274 aa16.04■□□□□ 0.16
C9orf3-222ENST00000496567 C11orf94C9JXX5 98 aa16.03■□□□□ 0.16
C9orf3-222ENST00000496567 K7EQM0 130 aa16.03■□□□□ 0.16
C9orf3-222ENST00000496567 TCRAP04437 139 aa16.03■□□□□ 0.16
C9orf3-222ENST00000496567 FRMD6-AS1P0C7T7 363 aa16.03■□□□□ 0.16
C9orf3-222ENST00000496567 ATP5G3P48201 142 aa16.03■□□□□ 0.16
C9orf3-222ENST00000496567 NUTF2P61970 127 aaKnown RBP16.03■□□□□ 0.16
C9orf3-222ENST00000496567 GNG5P63218 68 aa16.03■□□□□ 0.16
C9orf3-222ENST00000496567 HIST1H2BAQ96A08 127 aa16.03■□□□□ 0.16
C9orf3-222ENST00000496567 IGKV2-40A0A087WW87 121 aaPredicted RBP16.02■□□□□ 0.16
C9orf3-222ENST00000496567 A8MTW9 85 aa16.02■□□□□ 0.16
C9orf3-222ENST00000496567 NPIPB6E9PJ23 425 aa16.02■□□□□ 0.16
C9orf3-222ENST00000496567 F6UZH7 168 aa16.02■□□□□ 0.16
C9orf3-222ENST00000496567 IGKV2D-40P01614 121 aaPredicted RBP16.02■□□□□ 0.16
C9orf3-222ENST00000496567 IGKV3-20P01619 116 aa16.02■□□□□ 0.16
C9orf3-222ENST00000496567 BCL2P10415 239 aa16.02■□□□□ 0.16
C9orf3-222ENST00000496567 HAGHQ16775 308 aa16.02■□□□□ 0.16
C9orf3-222ENST00000496567 LINC00322Q6ZN03 302 aaPredicted RBP16.02■□□□□ 0.16
C9orf3-222ENST00000496567 GOLT1AQ6ZVE7 132 aa16.02■□□□□ 0.16
C9orf3-222ENST00000496567 LINC00477Q96M19 166 aa16.02■□□□□ 0.16
C9orf3-222ENST00000496567 ATG101Q9BSB4 218 aa16.02■□□□□ 0.16
C9orf3-222ENST00000496567 PPP1R14DQ9NXH3 145 aa16.02■□□□□ 0.16
C9orf3-222ENST00000496567 AGRNO00468 2067 aa16.02■□□□□ 0.15
C9orf3-222ENST00000496567 KIR2DL5BA0A0G2JN68 375 aa16.01■□□□□ 0.15
C9orf3-222ENST00000496567 KIR2DL5BA0A0G2JPC4 375 aa16.01■□□□□ 0.15
C9orf3-222ENST00000496567 APOC4P55056 127 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms