RNA–Protein interactions for RNA: ENST00000496527.1

CHRD-217, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 588 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-217ENST00000496527 NEU1Q99519 415 aa16.43■□□□□ 0.22
CHRD-217ENST00000496527 AAMDCQ9H7C9 122 aa16.43■□□□□ 0.22
CHRD-217ENST00000496527 PRELID1Q9Y255 219 aa16.43■□□□□ 0.22
CHRD-217ENST00000496527 BORCS7-ASMTA0A0B4J1R7 106 aa16.42■□□□□ 0.22
CHRD-217ENST00000496527 A0A1W2PPV4 95 aa16.42■□□□□ 0.22
CHRD-217ENST00000496527 SMIM9A6NGZ8 99 aa16.42■□□□□ 0.22
CHRD-217ENST00000496527 FXYD5Q96DB9 178 aa16.42■□□□□ 0.22
CHRD-217ENST00000496527 MRPL53Q96EL3 112 aaKnown RBP16.42■□□□□ 0.22
CHRD-217ENST00000496527 PSMG3Q9BT73 122 aaPredicted RBP16.42■□□□□ 0.22
CHRD-217ENST00000496527 SMLR1H3BR10 107 aa16.41■□□□□ 0.22
CHRD-217ENST00000496527 ARPC5O15511 151 aa16.41■□□□□ 0.22
CHRD-217ENST00000496527 INSP01308 110 aa16.41■□□□□ 0.22
CHRD-217ENST00000496527 ATP6V0CP27449 155 aa16.41■□□□□ 0.22
CHRD-217ENST00000496527 RAB2AP61019 212 aa16.41■□□□□ 0.22
CHRD-217ENST00000496527 C1orf158Q8N1D5 194 aa16.41■□□□□ 0.22
CHRD-217ENST00000496527 EXOC3-AS1Q8N2X6 119 aa16.41■□□□□ 0.22
CHRD-217ENST00000496527 OR10G4Q8NGN3 311 aa16.41■□□□□ 0.22
CHRD-217ENST00000496527 OR10G9Q8NGN4 311 aa16.41■□□□□ 0.22
CHRD-217ENST00000496527 OR10G7Q8NGN6 311 aa16.41■□□□□ 0.22
CHRD-217ENST00000496527 TMEM208Q9BTX3 173 aa16.41■□□□□ 0.22
CHRD-217ENST00000496527 M0R3E3 92 aa16.4■□□□□ 0.22
CHRD-217ENST00000496527 NANOS2P60321 138 aaKnown RBP16.4■□□□□ 0.22
CHRD-217ENST00000496527 UBE2L3P68036 154 aaKnown RBP16.4■□□□□ 0.22
CHRD-217ENST00000496527 ICAM4Q14773 271 aa16.4■□□□□ 0.22
CHRD-217ENST00000496527 RPL7L1Q6DKI1 246 aaKnown RBP16.4■□□□□ 0.22
CHRD-217ENST00000496527 FAM122CQ6P4D5 195 aa16.4■□□□□ 0.22
CHRD-217ENST00000496527 OR2G3Q8NGZ4 309 aa16.4■□□□□ 0.22
CHRD-217ENST00000496527 ZNF503Q96F45 646 aa16.4■□□□□ 0.22
CHRD-217ENST00000496527 CRXO43186 299 aaPredicted RBP16.39■□□□□ 0.21
CHRD-217ENST00000496527 SERF2P84101 59 aa16.39■□□□□ 0.21
CHRD-217ENST00000496527 BAP18Q8IXM2 172 aa16.39■□□□□ 0.21
CHRD-217ENST00000496527 TRAV12-2A0A075B6T6 113 aa16.38■□□□□ 0.21
CHRD-217ENST00000496527 NUPR2A6NF83 97 aa16.38■□□□□ 0.21
CHRD-217ENST00000496527 EIF3GO75821 320 aaKnown RBP eCLIP16.38■□□□□ 0.21
CHRD-217ENST00000496527 HBE1P02100 147 aa16.38■□□□□ 0.21
CHRD-217ENST00000496527 MBP02144 154 aa16.38■□□□□ 0.21
CHRD-217ENST00000496527 CDKN1BP46527 198 aa16.38■□□□□ 0.21
CHRD-217ENST00000496527 GNPNAT1Q96EK6 184 aaPredicted RBP16.38■□□□□ 0.21
CHRD-217ENST00000496527 TMEM189A5PLL7 270 aa16.37■□□□□ 0.21
CHRD-217ENST00000496527 TAAR5O14804 337 aa16.37■□□□□ 0.21
CHRD-217ENST00000496527 TSPOP30536 169 aa16.37■□□□□ 0.21
CHRD-217ENST00000496527 PQLC2Q6ZP29 291 aa16.37■□□□□ 0.21
CHRD-217ENST00000496527 PHYHIPLQ96FC7 376 aa16.37■□□□□ 0.21
CHRD-217ENST00000496527 SH3BGRL3Q9H299 93 aa16.37■□□□□ 0.21
CHRD-217ENST00000496527 NPIPB6E9PJ23 425 aa16.36■□□□□ 0.21
CHRD-217ENST00000496527 CDC34P49427 236 aaPredicted RBP16.36■□□□□ 0.21
CHRD-217ENST00000496527 RANP62826 216 aaKnown RBP16.36■□□□□ 0.21
CHRD-217ENST00000496527 RRN3P1Q2M238 152 aa16.36■□□□□ 0.21
CHRD-217ENST00000496527 CEMP1Q6PRD7 247 aaPredicted RBP16.36■□□□□ 0.21
CHRD-217ENST00000496527 LYPD1Q8N2G4 141 aa16.36■□□□□ 0.21
CHRD-217ENST00000496527 RPP25LQ8N5L8 163 aaKnown RBP16.36■□□□□ 0.21
CHRD-217ENST00000496527 PHLDA1Q8WV24 401 aaPredicted RBP16.36■□□□□ 0.21
CHRD-217ENST00000496527 JTBO76095 146 aa16.35■□□□□ 0.21
CHRD-217ENST00000496527 EMP1P54849 157 aa16.35■□□□□ 0.21
CHRD-217ENST00000496527 KLK5Q9Y337 293 aaPredicted RBP16.35■□□□□ 0.21
CHRD-217ENST00000496527 HMGB3O15347 200 aaKnown RBP16.34■□□□□ 0.21
CHRD-217ENST00000496527 CT45A10P0DMU9 189 aa16.34■□□□□ 0.21
CHRD-217ENST00000496527 LEPP41159 167 aa16.34■□□□□ 0.21
CHRD-217ENST00000496527 ODF3Q96PU9 254 aa16.34■□□□□ 0.21
CHRD-217ENST00000496527 LINC01587Q99440 93 aa16.34■□□□□ 0.21
CHRD-217ENST00000496527 Q9H3A6 140 aa16.34■□□□□ 0.21
CHRD-217ENST00000496527 LOC102723971A0A1B0GUV8 181 aa16.33■□□□□ 0.2
CHRD-217ENST00000496527 CSN1S1P47710 185 aa16.33■□□□□ 0.2
CHRD-217ENST00000496527 ERCC8Q13216 396 aa16.33■□□□□ 0.2
CHRD-217ENST00000496527 TMEM256Q8N2U0 113 aa16.33■□□□□ 0.2
CHRD-217ENST00000496527 LINC00477Q96M19 166 aa16.33■□□□□ 0.2
CHRD-217ENST00000496527 CELA1Q9UNI1 258 aa16.33■□□□□ 0.2
CHRD-217ENST00000496527 CSMD3Q7Z407 3707 aa16.32■□□□□ 0.2
CHRD-217ENST00000496527 STARD9Q9P2P6 4700 aa16.32■□□□□ 0.2
CHRD-217ENST00000496527 HMSDA8MTL9 139 aa16.32■□□□□ 0.2
CHRD-217ENST00000496527 ZNF345Q14585 488 aa16.32■□□□□ 0.2
CHRD-217ENST00000496527 OR11H4Q8NGC9 324 aa16.32■□□□□ 0.2
CHRD-217ENST00000496527 RAB24Q969Q5 203 aa16.32■□□□□ 0.2
CHRD-217ENST00000496527 ACTR3CQ9C0K3 210 aaPredicted RBP16.32■□□□□ 0.2
CHRD-217ENST00000496527 AGPAT4-IT1Q9H0P7 198 aa16.32■□□□□ 0.2
CHRD-217ENST00000496527 IGKV2-40A0A087WW87 121 aaPredicted RBP16.31■□□□□ 0.2
CHRD-217ENST00000496527 ZNF705GA8MUZ8 300 aaPredicted RBP16.31■□□□□ 0.2
CHRD-217ENST00000496527 J3KRW8 73 aa16.31■□□□□ 0.2
CHRD-217ENST00000496527 IGKV2D-40P01614 121 aaPredicted RBP16.31■□□□□ 0.2
CHRD-217ENST00000496527 STAG3L2P0CL84 134 aa16.31■□□□□ 0.2
CHRD-217ENST00000496527 STAG3L3P0CL85 134 aa16.31■□□□□ 0.2
CHRD-217ENST00000496527 SPART-AS1P0CW21 52 aa16.31■□□□□ 0.2
CHRD-217ENST00000496527 ARL14EPLP0DKL9 152 aa16.31■□□□□ 0.2
CHRD-217ENST00000496527 C9orf47Q6ZRZ4 202 aa16.31■□□□□ 0.2
CHRD-217ENST00000496527 KCNRGQ8N5I3 272 aa16.31■□□□□ 0.2
CHRD-217ENST00000496527 ARPC5LQ9BPX5 153 aa16.31■□□□□ 0.2
CHRD-217ENST00000496527 C20orf144Q9BQM9 153 aa16.31■□□□□ 0.2
CHRD-217ENST00000496527 CYTL1Q9NRR1 136 aa16.31■□□□□ 0.2
CHRD-217ENST00000496527 C11orf94C9JXX5 98 aa16.3■□□□□ 0.2
CHRD-217ENST00000496527 KIR3DS1Q14943 382 aa16.3■□□□□ 0.2
CHRD-217ENST00000496527 FAM74A1Q5RGS3 127 aa16.3■□□□□ 0.2
CHRD-217ENST00000496527 TMEM78Q5T7P6 136 aa16.3■□□□□ 0.2
CHRD-217ENST00000496527 Q6ZNX1 250 aa16.3■□□□□ 0.2
CHRD-217ENST00000496527 OTORQ9NRC9 128 aa16.3■□□□□ 0.2
CHRD-217ENST00000496527 A0A0D9SG52 128 aa16.29■□□□□ 0.2
CHRD-217ENST00000496527 TAS2R60P59551 318 aa16.29■□□□□ 0.2
CHRD-217ENST00000496527 C12orf74Q32Q52 190 aa16.29■□□□□ 0.2
CHRD-217ENST00000496527 GFI1BQ5VTD9 330 aa16.29■□□□□ 0.2
CHRD-217ENST00000496527 RXFP4Q8TDU9 374 aa16.29■□□□□ 0.2
CHRD-217ENST00000496527 HYLS1Q96M11 299 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms