RNA–Protein interactions for RNA: ENST00000495509.6

PHF1-211, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-211ENST00000495509 FAM24BQ8N5W8 94 aa11.78□□□□□ -0.52
PHF1-211ENST00000495509 C16orf92Q96LL3 132 aa11.78□□□□□ -0.52
PHF1-211ENST00000495509 OTORQ9NRC9 128 aa11.78□□□□□ -0.52
PHF1-211ENST00000495509 SMCO4Q9NRQ5 59 aa11.78□□□□□ -0.52
PHF1-211ENST00000495509 LOC105371267A0A1B0GV96 52 aa11.77□□□□□ -0.52
PHF1-211ENST00000495509 SCO2A0A1W2PP80 73 aa11.77□□□□□ -0.52
PHF1-211ENST00000495509 C7orf77A4D0Y5 90 aa11.77□□□□□ -0.52
PHF1-211ENST00000495509 SLC25A5P05141 298 aaKnown RBP11.77□□□□□ -0.52
PHF1-211ENST00000495509 PSG9Q00887 426 aa11.77□□□□□ -0.52
PHF1-211ENST00000495509 RHEBQ15382 184 aa11.77□□□□□ -0.52
PHF1-211ENST00000495509 RBPMS2Q6ZRY4 209 aaKnown RBP11.77□□□□□ -0.52
PHF1-211ENST00000495509 LYPD1Q8N2G4 141 aa11.77□□□□□ -0.52
PHF1-211ENST00000495509 C20orf173Q96LM9 149 aa11.77□□□□□ -0.52
PHF1-211ENST00000495509 ZNF253O75346 499 aa11.77□□□□□ -0.53
PHF1-211ENST00000495509 TAGLN2P37802 199 aaKnown RBP11.77□□□□□ -0.53
PHF1-211ENST00000495509 AKR1C3P42330 323 aa11.77□□□□□ -0.53
PHF1-211ENST00000495509 MEOX2P50222 304 aa11.77□□□□□ -0.53
PHF1-211ENST00000495509 AAMDCQ9H7C9 122 aa11.77□□□□□ -0.53
PHF1-211ENST00000495509 EPDR1Q9UM22 224 aa11.77□□□□□ -0.53
PHF1-211ENST00000495509 RPH3ALQ9UNE2 315 aa11.77□□□□□ -0.53
PHF1-211ENST00000495509 IGLV1-51P01701 117 aa11.76□□□□□ -0.53
PHF1-211ENST00000495509 WFDC9Q8NEX5 89 aa11.76□□□□□ -0.53
PHF1-211ENST00000495509 LINC00479Q96M42 142 aa11.76□□□□□ -0.53
PHF1-211ENST00000495509 PRAC2D3DTV9 90 aa11.75□□□□□ -0.53
PHF1-211ENST00000495509 K7EQG2 157 aa11.75□□□□□ -0.53
PHF1-211ENST00000495509 CD33P20138 364 aa11.75□□□□□ -0.53
PHF1-211ENST00000495509 DEFB1P60022 68 aa11.75□□□□□ -0.53
PHF1-211ENST00000495509 TXNDC17Q9BRA2 123 aa11.75□□□□□ -0.53
PHF1-211ENST00000495509 SLC50A1Q9BRV3 221 aa11.75□□□□□ -0.53
PHF1-211ENST00000495509 NIPSNAP3BQ9BS92 247 aa11.75□□□□□ -0.53
PHF1-211ENST00000495509 DERL1Q9BUN8 251 aa11.75□□□□□ -0.53
PHF1-211ENST00000495509 PDE6DO43924 150 aa11.74□□□□□ -0.53
PHF1-211ENST00000495509 LCN12Q6JVE5 192 aa11.74□□□□□ -0.53
PHF1-211ENST00000495509 C5orf17Q8NAS9 161 aa11.74□□□□□ -0.53
PHF1-211ENST00000495509 ISLRO14498 428 aa11.74□□□□□ -0.53
PHF1-211ENST00000495509 IGLL1P15814 213 aa11.74□□□□□ -0.53
PHF1-211ENST00000495509 PAFAH1B2P68402 229 aa11.74□□□□□ -0.53
PHF1-211ENST00000495509 PSG3Q16557 428 aa11.74□□□□□ -0.53
PHF1-211ENST00000495509 CMTM2Q8TAZ6 248 aa11.74□□□□□ -0.53
PHF1-211ENST00000495509 RPUSD4Q96CM3 377 aaKnown RBP11.74□□□□□ -0.53
PHF1-211ENST00000495509 TVP23CQ96ET8 276 aa11.74□□□□□ -0.53
PHF1-211ENST00000495509 SGK494Q96LW2 274 aa11.74□□□□□ -0.53
PHF1-211ENST00000495509 AGRNO00468 2067 aa11.74□□□□□ -0.53
PHF1-211ENST00000495509 TRAV34A0A0B4J273 112 aa11.73□□□□□ -0.53
PHF1-211ENST00000495509 F6UZH7 168 aa11.73□□□□□ -0.53
PHF1-211ENST00000495509 TMEM250H0YL14 139 aa11.73□□□□□ -0.53
PHF1-211ENST00000495509 PEX7O00628 323 aa11.73□□□□□ -0.53
PHF1-211ENST00000495509 TCRAP04437 139 aa11.73□□□□□ -0.53
PHF1-211ENST00000495509 ZNF688P0C7X2 276 aa11.73□□□□□ -0.53
PHF1-211ENST00000495509 C15orf54Q8N8G6 183 aa11.73□□□□□ -0.53
PHF1-211ENST00000495509 ZNF256Q9Y2P7 627 aaPredicted RBP11.73□□□□□ -0.53
PHF1-211ENST00000495509 ANK2Q01484 3957 aa11.73□□□□□ -0.53
PHF1-211ENST00000495509 TRAV25A0A0B4J276 109 aa11.72□□□□□ -0.53
PHF1-211ENST00000495509 DIRC3C9JPN6 131 aa11.72□□□□□ -0.53
PHF1-211ENST00000495509 ZNF705DP0CH99 300 aaPredicted RBP11.72□□□□□ -0.53
PHF1-211ENST00000495509 ZNF705BP0CI00 300 aaPredicted RBP11.72□□□□□ -0.53
PHF1-211ENST00000495509 GOLT1AQ6ZVE7 132 aa11.72□□□□□ -0.53
PHF1-211ENST00000495509 C2CD4CQ8TF44 421 aa11.72□□□□□ -0.53
PHF1-211ENST00000495509 TUBA4BQ9H853 241 aa11.72□□□□□ -0.53
PHF1-211ENST00000495509 IGKV2-40A0A087WW87 121 aaPredicted RBP11.72□□□□□ -0.53
PHF1-211ENST00000495509 COLCA2A8K830 154 aa11.72□□□□□ -0.53
PHF1-211ENST00000495509 IGKV2D-40P01614 121 aaPredicted RBP11.72□□□□□ -0.53
PHF1-211ENST00000495509 ID1P41134 155 aa11.72□□□□□ -0.53
PHF1-211ENST00000495509 ZNF674Q2M3X9 581 aa11.72□□□□□ -0.53
PHF1-211ENST00000495509 ZNF738Q8NE65 137 aa11.72□□□□□ -0.53
PHF1-211ENST00000495509 C11orf52Q96A22 123 aa11.72□□□□□ -0.53
PHF1-211ENST00000495509 SPAG8Q99932 426 aaPredicted RBP11.72□□□□□ -0.53
PHF1-211ENST00000495509 CMYA5Q8N3K9 4069 aa11.71□□□□□ -0.53
PHF1-211ENST00000495509 TRAV8-1A0A0A6YYK1 113 aa11.71□□□□□ -0.54
PHF1-211ENST00000495509 F6UB75 175 aa11.71□□□□□ -0.54
PHF1-211ENST00000495509 CSN1S1P47710 185 aa11.71□□□□□ -0.54
PHF1-211ENST00000495509 RIPPLY3P57055 190 aa11.71□□□□□ -0.54
PHF1-211ENST00000495509 PSMG4Q5JS54 123 aa11.71□□□□□ -0.54
PHF1-211ENST00000495509 C9orf66Q5T8R8 295 aa11.71□□□□□ -0.54
PHF1-211ENST00000495509 HIST1H2BAQ96A08 127 aa11.71□□□□□ -0.54
PHF1-211ENST00000495509 ATG101Q9BSB4 218 aa11.71□□□□□ -0.54
PHF1-211ENST00000495509 PARLQ9H300 379 aa11.71□□□□□ -0.54
PHF1-211ENST00000495509 RPL35P42766 123 aaKnown RBP11.7□□□□□ -0.54
PHF1-211ENST00000495509 ASCL2Q99929 193 aa11.7□□□□□ -0.54
PHF1-211ENST00000495509 VGLL1Q99990 258 aa11.7□□□□□ -0.54
PHF1-211ENST00000495509 PRELID1Q9Y255 219 aa11.7□□□□□ -0.54
PHF1-211ENST00000495509 TRAV2A0A0B4J234 112 aa11.69□□□□□ -0.54
PHF1-211ENST00000495509 NDUFS6O75380 124 aaKnown RBP11.69□□□□□ -0.54
PHF1-211ENST00000495509 INSL3P51460 131 aa11.69□□□□□ -0.54
PHF1-211ENST00000495509 SNRPD3P62318 126 aaKnown RBP11.69□□□□□ -0.54
PHF1-211ENST00000495509 ERCC8Q13216 396 aa11.69□□□□□ -0.54
PHF1-211ENST00000495509 ISOC2Q96AB3 205 aa11.69□□□□□ -0.54
PHF1-211ENST00000495509 CLEC5AQ9NY25 188 aa11.69□□□□□ -0.54
PHF1-211ENST00000495509 TRBV20OR9-2A0A075B6H5 130 aa11.69□□□□□ -0.54
PHF1-211ENST00000495509 OR4C46A6NHA9 309 aa11.69□□□□□ -0.54
PHF1-211ENST00000495509 ZNF727A8MUV8 499 aa11.69□□□□□ -0.54
PHF1-211ENST00000495509 IGLV2-11P01706 119 aa11.69□□□□□ -0.54
PHF1-211ENST00000495509 PNRC1Q12796 327 aaPredicted RBP11.69□□□□□ -0.54
PHF1-211ENST00000495509 ZNF124Q15973 351 aa11.69□□□□□ -0.54
PHF1-211ENST00000495509 GDF5OSQ5U4N7 250 aa11.69□□□□□ -0.54
PHF1-211ENST00000495509 SAMD13Q5VXD3 122 aa11.69□□□□□ -0.54
PHF1-211ENST00000495509 OR2K2Q8NGT1 345 aa11.69□□□□□ -0.54
PHF1-211ENST00000495509 MRPL53Q96EL3 112 aaKnown RBP11.69□□□□□ -0.54
PHF1-211ENST00000495509 TCEAL7Q9BRU2 100 aa11.69□□□□□ -0.54
PHF1-211ENST00000495509 KLF12Q9Y4X4 402 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms