RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 ZMAT4Q9H898 229 aa12.05□□□□□ -0.48
SDF4-207ENST00000494748 NDUFB3O43676 98 aa12.05□□□□□ -0.48
SDF4-207ENST00000494748 RBP4P02753 201 aa12.05□□□□□ -0.48
SDF4-207ENST00000494748 PHLDA1Q8WV24 401 aaPredicted RBP12.05□□□□□ -0.48
SDF4-207ENST00000494748 ZGRF1Q86YA3 2104 aa12.05□□□□□ -0.48
SDF4-207ENST00000494748 SH2D1AO60880 128 aa12.04□□□□□ -0.48
SDF4-207ENST00000494748 OR5A1Q8NGJ0 315 aa12.04□□□□□ -0.48
SDF4-207ENST00000494748 AP1S3Q96PC3 154 aa12.04□□□□□ -0.48
SDF4-207ENST00000494748 HHLA3Q9XRX5 114 aa12.04□□□□□ -0.48
SDF4-207ENST00000494748 SPCS1Q9Y6A9 102 aa12.04□□□□□ -0.48
SDF4-207ENST00000494748 TTC28Q96AY4 2481 aa12.04□□□□□ -0.48
SDF4-207ENST00000494748 IGHV1-3A0A0C4DH29 117 aa12.04□□□□□ -0.48
SDF4-207ENST00000494748 COLQQ9Y215 455 aaPredicted RBP12.04□□□□□ -0.48
SDF4-207ENST00000494748 TMSB15BA0A087X1C1 80 aa12.03□□□□□ -0.48
SDF4-207ENST00000494748 GAS8-AS1O95177 125 aa12.03□□□□□ -0.48
SDF4-207ENST00000494748 PPIAL4GP0DN37 164 aa12.03□□□□□ -0.48
SDF4-207ENST00000494748 C1orf185Q5T7R7 199 aa12.03□□□□□ -0.48
SDF4-207ENST00000494748 FBXL15Q9H469 300 aa12.03□□□□□ -0.48
SDF4-207ENST00000494748 FXYD2P54710 66 aa12.03□□□□□ -0.48
SDF4-207ENST00000494748 KAAG1Q9UBP8 84 aa12.03□□□□□ -0.48
SDF4-207ENST00000494748 CEACAM4O75871 244 aa12.03□□□□□ -0.48
SDF4-207ENST00000494748 NMUP48645 174 aa12.03□□□□□ -0.48
SDF4-207ENST00000494748 RNF185Q96GF1 192 aa12.03□□□□□ -0.48
SDF4-207ENST00000494748 WFDC3Q8IUB2 231 aa12.02□□□□□ -0.48
SDF4-207ENST00000494748 CCL17Q92583 94 aa12.02□□□□□ -0.48
SDF4-207ENST00000494748 TMEM189A5PLL7 270 aa12.02□□□□□ -0.49
SDF4-207ENST00000494748 CT45A10P0DMU9 189 aa12.02□□□□□ -0.49
SDF4-207ENST00000494748 TTTY13Q9BZ97 58 aa12.02□□□□□ -0.49
SDF4-207ENST00000494748 K7EQM0 130 aa12.02□□□□□ -0.49
SDF4-207ENST00000494748 SMIM17P0DL12 118 aa12.02□□□□□ -0.49
SDF4-207ENST00000494748 EGR2P11161 476 aaPredicted RBP12.02□□□□□ -0.49
SDF4-207ENST00000494748 ZNF80P51504 273 aaPredicted RBP12.02□□□□□ -0.49
SDF4-207ENST00000494748 TM4SF20Q53R12 229 aa12.02□□□□□ -0.49
SDF4-207ENST00000494748 RNF125Q96EQ8 232 aa12.02□□□□□ -0.49
SDF4-207ENST00000494748 ACACAQ13085 2346 aa12.01□□□□□ -0.49
SDF4-207ENST00000494748 DCHS2Q6V1P9 2916 aa12.01□□□□□ -0.49
SDF4-207ENST00000494748 IGLC6P0CF74 106 aa12.01□□□□□ -0.49
SDF4-207ENST00000494748 FCGR2BP31994 310 aaPredicted RBP12.01□□□□□ -0.49
SDF4-207ENST00000494748 ODF1Q14990 250 aa12.01□□□□□ -0.49
SDF4-207ENST00000494748 COL25A1Q9BXS0 654 aaPredicted RBP12.01□□□□□ -0.49
SDF4-207ENST00000494748 MGAQ8IWI9 3026 aa12.01□□□□□ -0.49
SDF4-207ENST00000494748 PRSS47A8MTI9 375 aa12.01□□□□□ -0.49
SDF4-207ENST00000494748 ZNF562Q6V9R5 426 aa12.01□□□□□ -0.49
SDF4-207ENST00000494748 HIGD1BQ9P298 99 aa12.01□□□□□ -0.49
SDF4-207ENST00000494748 CHTOPQ9Y3Y2 248 aaKnown RBP12.01□□□□□ -0.49
SDF4-207ENST00000494748 SAMD5Q5TGI4 173 aa12□□□□□ -0.49
SDF4-207ENST00000494748 CLEC2AQ6UVW9 174 aa12□□□□□ -0.49
SDF4-207ENST00000494748 BUB1B-PAK6H3BSN5 160 aa12□□□□□ -0.49
SDF4-207ENST00000494748 IL4P05112 153 aa12□□□□□ -0.49
SDF4-207ENST00000494748 TNFRSF14Q92956 283 aa12□□□□□ -0.49
SDF4-207ENST00000494748 IGKV2-40A0A087WW87 121 aaPredicted RBP11.99□□□□□ -0.49
SDF4-207ENST00000494748 TEX48A0A1B0GUV7 120 aa11.99□□□□□ -0.49
SDF4-207ENST00000494748 F8W735 103 aaPredicted RBP11.99□□□□□ -0.49
SDF4-207ENST00000494748 K7ERJ3 54 aa11.99□□□□□ -0.49
SDF4-207ENST00000494748 IGKV2D-40P01614 121 aaPredicted RBP11.99□□□□□ -0.49
SDF4-207ENST00000494748 IGHG4P01861 327 aa11.99□□□□□ -0.49
SDF4-207ENST00000494748 PDE6HQ13956 83 aa11.99□□□□□ -0.49
SDF4-207ENST00000494748 DEFB109BQ30KR1 87 aa11.99□□□□□ -0.49
SDF4-207ENST00000494748 ASCL5Q7RTU5 278 aa11.99□□□□□ -0.49
SDF4-207ENST00000494748 MSRB1Q9NZV6 116 aa11.99□□□□□ -0.49
SDF4-207ENST00000494748 PIEZO2Q9H5I5 2752 aa11.99□□□□□ -0.49
SDF4-207ENST00000494748 CKS2P33552 79 aa11.99□□□□□ -0.49
SDF4-207ENST00000494748 BSPH1Q075Z2 132 aa11.99□□□□□ -0.49
SDF4-207ENST00000494748 TMEM108Q6UXF1 575 aa11.99□□□□□ -0.49
SDF4-207ENST00000494748 C16orf97H3BN30 126 aa11.98□□□□□ -0.49
SDF4-207ENST00000494748 LY6LH3BQJ8 138 aa11.98□□□□□ -0.49
SDF4-207ENST00000494748 PRR25Q96S07 402 aa11.98□□□□□ -0.49
SDF4-207ENST00000494748 VSTM5A8MXK1 200 aa11.98□□□□□ -0.49
SDF4-207ENST00000494748 SHISA9B4DS77 424 aa11.98□□□□□ -0.49
SDF4-207ENST00000494748 FABP2P12104 132 aa11.98□□□□□ -0.49
SDF4-207ENST00000494748 NOTCH3Q9UM47 2321 aa11.98□□□□□ -0.49
SDF4-207ENST00000494748 CREBBPQ92793 2442 aa11.98□□□□□ -0.49
SDF4-207ENST00000494748 SMIM13P0DJ93 91 aa11.98□□□□□ -0.49
SDF4-207ENST00000494748 SRSF8Q9BRL6 282 aaKnown RBP11.98□□□□□ -0.49
SDF4-207ENST00000494748 CNFNQ9BYD5 112 aa11.98□□□□□ -0.49
SDF4-207ENST00000494748 CHAC1Q9BUX1 264 aa11.97□□□□□ -0.49
SDF4-207ENST00000494748 S4R3C0 116 aa11.97□□□□□ -0.49
SDF4-207ENST00000494748 TWIST1Q15672 202 aa11.97□□□□□ -0.49
SDF4-207ENST00000494748 ATMQ13315 3056 aa11.96□□□□□ -0.49
SDF4-207ENST00000494748 Q8TAT8 98 aa11.96□□□□□ -0.49
SDF4-207ENST00000494748 TM2D2Q9BX73 214 aa11.96□□□□□ -0.49
SDF4-207ENST00000494748 GCSHP23434 173 aa11.96□□□□□ -0.5
SDF4-207ENST00000494748 GFRALQ6UXV0 394 aa11.96□□□□□ -0.5
SDF4-207ENST00000494748 TRBV25-1A0A075B6N4 114 aa11.95□□□□□ -0.5
SDF4-207ENST00000494748 A0A1W2PRD5 423 aa11.95□□□□□ -0.5
SDF4-207ENST00000494748 A0A1W2PRF3 423 aa11.95□□□□□ -0.5
SDF4-207ENST00000494748 A0A1W2PRM7 423 aa11.95□□□□□ -0.5
SDF4-207ENST00000494748 EVI2AP22794 236 aa11.95□□□□□ -0.5
SDF4-207ENST00000494748 KLF17Q5JT82 389 aaPredicted RBP11.95□□□□□ -0.5
SDF4-207ENST00000494748 VGLL1Q99990 258 aa11.95□□□□□ -0.5
SDF4-207ENST00000494748 IGLV2-18A0A075B6J9 118 aa11.95□□□□□ -0.5
SDF4-207ENST00000494748 FCER1GP30273 86 aa11.95□□□□□ -0.5
SDF4-207ENST00000494748 RNASE6Q93091 150 aaKnown RBP11.95□□□□□ -0.5
SDF4-207ENST00000494748 SMAD5-AS1Q9Y6J3 95 aa11.95□□□□□ -0.5
SDF4-207ENST00000494748 AGRNO00468 2067 aa11.95□□□□□ -0.5
SDF4-207ENST00000494748 PPIAL4CA0A0B4J2A2 164 aa11.95□□□□□ -0.5
SDF4-207ENST00000494748 GOSR1O95249 250 aa11.95□□□□□ -0.5
SDF4-207ENST00000494748 LEPP41159 167 aa11.95□□□□□ -0.5
SDF4-207ENST00000494748 IGFL3Q6UXB1 125 aa11.95□□□□□ -0.5
SDF4-207ENST00000494748 K7EMI3 77 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms