RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 SCGB2A1O75556 95 aa8.73□□□□□ -1.01
CHMP3-209ENST00000494623 CLEC3BP05452 202 aa8.73□□□□□ -1.01
CHMP3-209ENST00000494623 CSN3P07498 182 aa8.73□□□□□ -1.01
CHMP3-209ENST00000494623 LINC00614P0C842 121 aa8.73□□□□□ -1.01
CHMP3-209ENST00000494623 HLA-DMBP28068 263 aa8.73□□□□□ -1.01
CHMP3-209ENST00000494623 NDFIP1Q9BT67 221 aa8.73□□□□□ -1.01
CHMP3-209ENST00000494623 C2orf70A6NJV1 201 aa8.73□□□□□ -1.01
CHMP3-209ENST00000494623 G3V318 75 aa8.73□□□□□ -1.01
CHMP3-209ENST00000494623 FAM162BQ5T6X4 162 aa8.73□□□□□ -1.01
CHMP3-209ENST00000494623 IGHV3OR16-10A0A075B7F0 116 aa8.72□□□□□ -1.01
CHMP3-209ENST00000494623 RHOGP84095 191 aa8.72□□□□□ -1.01
CHMP3-209ENST00000494623 TIMM8BQ9Y5J9 83 aaPredicted RBP8.72□□□□□ -1.01
CHMP3-209ENST00000494623 ITPR1Q14643 2758 aa8.72□□□□□ -1.01
CHMP3-209ENST00000494623 IGHV1-24A0A0C4DH33 117 aa8.72□□□□□ -1.01
CHMP3-209ENST00000494623 IGHV3-66A0A0C4DH42 116 aa8.72□□□□□ -1.01
CHMP3-209ENST00000494623 MUC21A0A0G2JKD1 596 aa8.72□□□□□ -1.01
CHMP3-209ENST00000494623 MUC21A0A140T8X8 626 aa8.72□□□□□ -1.01
CHMP3-209ENST00000494623 SERTM2A0A1B0GWG4 89 aa8.72□□□□□ -1.01
CHMP3-209ENST00000494623 TMEM189A5PLL7 270 aa8.72□□□□□ -1.01
CHMP3-209ENST00000494623 MUC21Q5SSG8 566 aa8.72□□□□□ -1.01
CHMP3-209ENST00000494623 LINC00173Q6ZV60 143 aa8.72□□□□□ -1.01
CHMP3-209ENST00000494623 FAM110DQ8TAY7 271 aaPredicted RBP8.72□□□□□ -1.01
CHMP3-209ENST00000494623 TMEM190Q8WZ59 177 aa8.72□□□□□ -1.01
CHMP3-209ENST00000494623 CHCHD1Q96BP2 118 aaKnown RBP8.72□□□□□ -1.01
CHMP3-209ENST00000494623 TXN2Q99757 166 aa8.72□□□□□ -1.01
CHMP3-209ENST00000494623 PRORYQ9H606 182 aa8.72□□□□□ -1.01
CHMP3-209ENST00000494623 SPTAN1Q13813 2472 aaKnown RBP8.71□□□□□ -1.01
CHMP3-209ENST00000494623 M0QZK8 103 aa8.71□□□□□ -1.01
CHMP3-209ENST00000494623 SH2D1AO60880 128 aa8.71□□□□□ -1.01
CHMP3-209ENST00000494623 IGLC3P0DOY3 106 aa8.71□□□□□ -1.01
CHMP3-209ENST00000494623 SPATA12Q7Z6I5 190 aa8.71□□□□□ -1.01
CHMP3-209ENST00000494623 Q8TAT8 98 aa8.71□□□□□ -1.01
CHMP3-209ENST00000494623 VGLL1Q99990 258 aa8.71□□□□□ -1.01
CHMP3-209ENST00000494623 NPFFO15130 113 aa8.71□□□□□ -1.02
CHMP3-209ENST00000494623 CLEC19AQ6UXS0 136 aa8.71□□□□□ -1.02
CHMP3-209ENST00000494623 Q6ZN92 141 aa8.71□□□□□ -1.02
CHMP3-209ENST00000494623 ZNF502Q8TBZ5 544 aa8.71□□□□□ -1.02
CHMP3-209ENST00000494623 UQCR10Q9UDW1 63 aa8.71□□□□□ -1.02
CHMP3-209ENST00000494623 IGHV3OR16-13A0A075B7E8 117 aa8.7□□□□□ -1.02
CHMP3-209ENST00000494623 IGHV3-74A0A0B4J1X5 117 aa8.7□□□□□ -1.02
CHMP3-209ENST00000494623 CENPVL3A0A0U1RRI6 287 aa8.7□□□□□ -1.02
CHMP3-209ENST00000494623 LEPROTL1O95214 131 aa8.7□□□□□ -1.02
CHMP3-209ENST00000494623 LYZL1Q6UWQ5 148 aa8.7□□□□□ -1.02
CHMP3-209ENST00000494623 TMEM219Q86XT9 240 aa8.7□□□□□ -1.02
CHMP3-209ENST00000494623 PRR25Q96S07 402 aa8.7□□□□□ -1.02
CHMP3-209ENST00000494623 TMEM70Q9BUB7 260 aa8.7□□□□□ -1.02
CHMP3-209ENST00000494623 SAPCD1Q5SSQ6 148 aa8.7□□□□□ -1.02
CHMP3-209ENST00000494623 KLHDC1Q8N7A1 406 aa8.7□□□□□ -1.02
CHMP3-209ENST00000494623 IGHV4-39P01824 125 aa8.69□□□□□ -1.02
CHMP3-209ENST00000494623 IGHG4P01861 327 aa8.69□□□□□ -1.02
CHMP3-209ENST00000494623 ZFHX3Q15911 3703 aa8.69□□□□□ -1.02
CHMP3-209ENST00000494623 TRAV9-2A0A087WT02 112 aa8.69□□□□□ -1.02
CHMP3-209ENST00000494623 IGHV3-49A0A0A0MS15 119 aa8.69□□□□□ -1.02
CHMP3-209ENST00000494623 TMEM213A2RRL7 107 aa8.69□□□□□ -1.02
CHMP3-209ENST00000494623 GOSR1O95249 250 aa8.69□□□□□ -1.02
CHMP3-209ENST00000494623 ZNF80P51504 273 aaPredicted RBP8.69□□□□□ -1.02
CHMP3-209ENST00000494623 LINC00527Q9UJ94 153 aa8.69□□□□□ -1.02
CHMP3-209ENST00000494623 H0Y8G0 127 aa8.68□□□□□ -1.02
CHMP3-209ENST00000494623 ZNF207O43670 478 aaKnown RBP8.68□□□□□ -1.02
CHMP3-209ENST00000494623 RPLP1P05386 114 aaKnown RBP8.68□□□□□ -1.02
CHMP3-209ENST00000494623 HNRNPA3P51991 378 aaKnown RBP8.68□□□□□ -1.02
CHMP3-209ENST00000494623 ERCC8Q13216 396 aa8.68□□□□□ -1.02
CHMP3-209ENST00000494623 Q6AWC8 147 aa8.68□□□□□ -1.02
CHMP3-209ENST00000494623 MCRIP2Q9BUT9 160 aaKnown RBP8.68□□□□□ -1.02
CHMP3-209ENST00000494623 SYS1-DBNDD2H3BUS1 97 aa8.68□□□□□ -1.02
CHMP3-209ENST00000494623 IGLL1P15814 213 aa8.68□□□□□ -1.02
CHMP3-209ENST00000494623 S100A7P31151 101 aa8.68□□□□□ -1.02
CHMP3-209ENST00000494623 RNF182Q8N6D2 247 aa8.68□□□□□ -1.02
CHMP3-209ENST00000494623 ZFAND3Q9H8U3 227 aa8.68□□□□□ -1.02
CHMP3-209ENST00000494623 VPS13CQ709C8 3753 aa8.68□□□□□ -1.02
CHMP3-209ENST00000494623 LOC389332A0A1B0GUA5 103 aa8.67□□□□□ -1.02
CHMP3-209ENST00000494623 A0A1B0GW15 77 aa8.67□□□□□ -1.02
CHMP3-209ENST00000494623 PRAC2D3DTV9 90 aa8.67□□□□□ -1.02
CHMP3-209ENST00000494623 BUB3O43684 328 aa8.67□□□□□ -1.02
CHMP3-209ENST00000494623 BRD3OSQ6XYD6 125 aa8.67□□□□□ -1.02
CHMP3-209ENST00000494623 MRPL52Q86TS9 123 aaKnown RBP8.67□□□□□ -1.02
CHMP3-209ENST00000494623 PRSS3P2Q8NHM4 247 aa8.67□□□□□ -1.02
CHMP3-209ENST00000494623 CCDC140Q96MF4 163 aa8.67□□□□□ -1.02
CHMP3-209ENST00000494623 OR4C46A6NHA9 309 aa8.67□□□□□ -1.02
CHMP3-209ENST00000494623 ZNF25P17030 456 aaPredicted RBP8.67□□□□□ -1.02
CHMP3-209ENST00000494623 C5orf56Q8N8D9 126 aa8.67□□□□□ -1.02
CHMP3-209ENST00000494623 EEF1AKMT3Q96AZ1 226 aa8.67□□□□□ -1.02
CHMP3-209ENST00000494623 ORM1P02763 201 aa8.67□□□□□ -1.02
CHMP3-209ENST00000494623 TFPI2P48307 235 aa8.67□□□□□ -1.02
CHMP3-209ENST00000494623 AMN1Q8IY45 258 aa8.67□□□□□ -1.02
CHMP3-209ENST00000494623 D6R8Y8 96 aa8.66□□□□□ -1.02
CHMP3-209ENST00000494623 OR5AL1P0C617 328 aa8.66□□□□□ -1.02
CHMP3-209ENST00000494623 BMI1P35226 326 aa8.66□□□□□ -1.02
CHMP3-209ENST00000494623 TWIST1Q15672 202 aa8.66□□□□□ -1.02
CHMP3-209ENST00000494623 FA2HQ7L5A8 372 aa8.66□□□□□ -1.02
CHMP3-209ENST00000494623 GATD1Q8NB37 220 aa8.66□□□□□ -1.02
CHMP3-209ENST00000494623 MAP1LC3CQ9BXW4 147 aa8.66□□□□□ -1.02
CHMP3-209ENST00000494623 CLPSL1A2RUU4 121 aa8.66□□□□□ -1.02
CHMP3-209ENST00000494623 ATP5G2Q06055 141 aa8.66□□□□□ -1.02
CHMP3-209ENST00000494623 AP5S1Q9NUS5 200 aa8.66□□□□□ -1.02
CHMP3-209ENST00000494623 CHTOPQ9Y3Y2 248 aaKnown RBP8.66□□□□□ -1.02
CHMP3-209ENST00000494623 IGHV4-61A0A0C4DH41 118 aa8.65□□□□□ -1.02
CHMP3-209ENST00000494623 CRXO43186 299 aaPredicted RBP8.65□□□□□ -1.02
CHMP3-209ENST00000494623 IFI27P40305 119 aaPredicted RBP8.65□□□□□ -1.02
CHMP3-209ENST00000494623 PAX8Q06710 450 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms