RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 SMR3AQ99954 134 aa5.16□□□□□ -1.58
MSH5-217ENST00000494458 SLC50A1Q9BRV3 221 aa5.16□□□□□ -1.58
MSH5-217ENST00000494458 ZNF492Q9P255 531 aa5.16□□□□□ -1.58
MSH5-217ENST00000494458 MLXQ9UH92 298 aa5.16□□□□□ -1.58
MSH5-217ENST00000494458 HIVEP1P15822 2718 aa5.15□□□□□ -1.58
MSH5-217ENST00000494458 TMEM213A2RRL7 107 aa5.15□□□□□ -1.59
MSH5-217ENST00000494458 H3BTX0 84 aa5.15□□□□□ -1.59
MSH5-217ENST00000494458 CRYBA1P05813 215 aa5.15□□□□□ -1.59
MSH5-217ENST00000494458 SNRPCP09234 159 aaKnown RBP5.15□□□□□ -1.59
MSH5-217ENST00000494458 CXCL1P09341 107 aa5.15□□□□□ -1.59
MSH5-217ENST00000494458 RAB5AP20339 215 aa5.15□□□□□ -1.59
MSH5-217ENST00000494458 FHL3Q13643 280 aa5.15□□□□□ -1.59
MSH5-217ENST00000494458 CT83Q5H943 113 aa5.15□□□□□ -1.59
MSH5-217ENST00000494458 OR10G8Q8NGN5 311 aa5.15□□□□□ -1.59
MSH5-217ENST00000494458 ZNF418Q8TF45 676 aaPredicted RBP5.15□□□□□ -1.59
MSH5-217ENST00000494458 C4orf3Q8WVX3 66 aa5.15□□□□□ -1.59
MSH5-217ENST00000494458 DUX5Q96PT3 197 aa5.15□□□□□ -1.59
MSH5-217ENST00000494458 JMJD8Q96S16 334 aa5.15□□□□□ -1.59
MSH5-217ENST00000494458 UFC1Q9Y3C8 167 aa5.15□□□□□ -1.59
MSH5-217ENST00000494458 HIVEP2P31629 2446 aa5.15□□□□□ -1.59
MSH5-217ENST00000494458 CUBNO60494 3623 aa5.14□□□□□ -1.59
MSH5-217ENST00000494458 NF1P21359 2839 aa5.14□□□□□ -1.59
MSH5-217ENST00000494458 IGHV4OR15-8A0A075B7B6 117 aa5.14□□□□□ -1.59
MSH5-217ENST00000494458 IGHV3OR16-8A0A075B7F1 116 aa5.14□□□□□ -1.59
MSH5-217ENST00000494458 A0A087WW49 117 aa5.14□□□□□ -1.59
MSH5-217ENST00000494458 TRAV34A0A0B4J273 112 aa5.14□□□□□ -1.59
MSH5-217ENST00000494458 SMIM27A0A1W2PRY6 76 aa5.14□□□□□ -1.59
MSH5-217ENST00000494458 FAM231BA6NCW3 169 aa5.14□□□□□ -1.59
MSH5-217ENST00000494458 H7BYZ3 331 aa5.14□□□□□ -1.59
MSH5-217ENST00000494458 M0R3E3 92 aa5.14□□□□□ -1.59
MSH5-217ENST00000494458 ATF4P18848 351 aaPredicted RBP5.14□□□□□ -1.59
MSH5-217ENST00000494458 HOXD3P31249 432 aaPredicted RBP5.14□□□□□ -1.59
MSH5-217ENST00000494458 FOXA3P55318 350 aaPredicted RBP5.14□□□□□ -1.59
MSH5-217ENST00000494458 PROK1P58294 105 aa5.14□□□□□ -1.59
MSH5-217ENST00000494458 FLI1Q01543 452 aaPredicted RBP5.14□□□□□ -1.59
MSH5-217ENST00000494458 OR5I1Q13606 314 aa5.14□□□□□ -1.59
MSH5-217ENST00000494458 TM4SF20Q53R12 229 aa5.14□□□□□ -1.59
MSH5-217ENST00000494458 SAMD13Q5VXD3 122 aa5.14□□□□□ -1.59
MSH5-217ENST00000494458 LCN12Q6JVE5 192 aa5.14□□□□□ -1.59
MSH5-217ENST00000494458 ADAMTSL5Q6ZMM2 481 aa5.14□□□□□ -1.59
MSH5-217ENST00000494458 LINC00322Q6ZN03 302 aaPredicted RBP5.14□□□□□ -1.59
MSH5-217ENST00000494458 C9orf47Q6ZRZ4 202 aa5.14□□□□□ -1.59
MSH5-217ENST00000494458 C8orf86Q6ZUL3 223 aa5.14□□□□□ -1.59
MSH5-217ENST00000494458 Q86TA4 180 aa5.14□□□□□ -1.59
MSH5-217ENST00000494458 ZNF575Q86XF7 245 aa5.14□□□□□ -1.59
MSH5-217ENST00000494458 CMTM2Q8TAZ6 248 aa5.14□□□□□ -1.59
MSH5-217ENST00000494458 GRAMD2BQ96HH9 432 aa5.14□□□□□ -1.59
MSH5-217ENST00000494458 BTF3L4Q96K17 158 aa5.14□□□□□ -1.59
MSH5-217ENST00000494458 RHPN1-AS1Q9BWJ2 59 aa5.14□□□□□ -1.59
MSH5-217ENST00000494458 AAMDCQ9H7C9 122 aa5.14□□□□□ -1.59
MSH5-217ENST00000494458 BIN3Q9NQY0 253 aa5.14□□□□□ -1.59
MSH5-217ENST00000494458 AURKAIP1Q9NWT8 199 aaPredicted RBP5.14□□□□□ -1.59
MSH5-217ENST00000494458 IL36BQ9NZH7 164 aa5.14□□□□□ -1.59
MSH5-217ENST00000494458 PSG8Q9UQ74 426 aa5.14□□□□□ -1.59
MSH5-217ENST00000494458 MTORP42345 2549 aa5.13□□□□□ -1.59
MSH5-217ENST00000494458 TRBV7-9A0A0J9YWB2 115 aa5.13□□□□□ -1.59
MSH5-217ENST00000494458 K7EQM0 130 aa5.13□□□□□ -1.59
MSH5-217ENST00000494458 ZNF207O43670 478 aaKnown RBP5.13□□□□□ -1.59
MSH5-217ENST00000494458 CRLF1O75462 422 aa5.13□□□□□ -1.59
MSH5-217ENST00000494458 CSN1S1P47710 185 aa5.13□□□□□ -1.59
MSH5-217ENST00000494458 CRIP1P50238 77 aa5.13□□□□□ -1.59
MSH5-217ENST00000494458 UBE2G1P62253 170 aa5.13□□□□□ -1.59
MSH5-217ENST00000494458 SRSF2Q01130 221 aaKnown RBP5.13□□□□□ -1.59
MSH5-217ENST00000494458 RPEL1Q2QD12 228 aa5.13□□□□□ -1.59
MSH5-217ENST00000494458 SAPCD1Q5SSQ6 148 aa5.13□□□□□ -1.59
MSH5-217ENST00000494458 GOLT1AQ6ZVE7 132 aa5.13□□□□□ -1.59
MSH5-217ENST00000494458 NUDT10Q8NFP7 164 aa5.13□□□□□ -1.59
MSH5-217ENST00000494458 DCANP1Q8TF63 244 aa5.13□□□□□ -1.59
MSH5-217ENST00000494458 NUDT11Q96G61 164 aa5.13□□□□□ -1.59
MSH5-217ENST00000494458 FAM210BQ96KR6 192 aa5.13□□□□□ -1.59
MSH5-217ENST00000494458 FAM19A4Q96LR4 140 aa5.13□□□□□ -1.59
MSH5-217ENST00000494458 PRR25Q96S07 402 aa5.13□□□□□ -1.59
MSH5-217ENST00000494458 SRD5A3Q9H8P0 318 aa5.13□□□□□ -1.59
MSH5-217ENST00000494458 SIGLEC8Q9NYZ4 499 aa5.13□□□□□ -1.59
MSH5-217ENST00000494458 LENEPQ9Y5L5 61 aa5.13□□□□□ -1.59
MSH5-217ENST00000494458 NSD1Q96L73 2696 aaPredicted RBP5.12□□□□□ -1.59
MSH5-217ENST00000494458 TRAV8-1A0A0A6YYK1 113 aa5.12□□□□□ -1.59
MSH5-217ENST00000494458 TGIF2-C20orf24A0A0A6YYL0 155 aa5.12□□□□□ -1.59
MSH5-217ENST00000494458 TRAV2A0A0B4J234 112 aa5.12□□□□□ -1.59
MSH5-217ENST00000494458 C2orf70A6NJV1 201 aa5.12□□□□□ -1.59
MSH5-217ENST00000494458 ADARB2-AS1A8MUL3 147 aa5.12□□□□□ -1.59
MSH5-217ENST00000494458 PRAC2D3DTV9 90 aa5.12□□□□□ -1.59
MSH5-217ENST00000494458 LINC01619G3V211 115 aa5.12□□□□□ -1.59
MSH5-217ENST00000494458 CBLN1P23435 193 aa5.12□□□□□ -1.59
MSH5-217ENST00000494458 HLA-DMBP28068 263 aa5.12□□□□□ -1.59
MSH5-217ENST00000494458 BMI1P35226 326 aa5.12□□□□□ -1.59
MSH5-217ENST00000494458 ERVFC1-1P60608 527 aa5.12□□□□□ -1.59
MSH5-217ENST00000494458 IBA57Q5T440 356 aaKnown RBP5.12□□□□□ -1.59
MSH5-217ENST00000494458 C18orf65Q6ZTR6 163 aa5.12□□□□□ -1.59
MSH5-217ENST00000494458 APRG1Q8IVJ8 170 aa5.12□□□□□ -1.59
MSH5-217ENST00000494458 OR4B1Q8NGF8 309 aa5.12□□□□□ -1.59
MSH5-217ENST00000494458 C20orf173Q96LM9 149 aa5.12□□□□□ -1.59
MSH5-217ENST00000494458 OR5B12Q96R08 314 aa5.12□□□□□ -1.59
MSH5-217ENST00000494458 VGLL1Q99990 258 aa5.12□□□□□ -1.59
MSH5-217ENST00000494458 GFRA4Q9GZZ7 299 aa5.12□□□□□ -1.59
MSH5-217ENST00000494458 AGPAT4-IT1Q9H0P7 198 aa5.12□□□□□ -1.59
MSH5-217ENST00000494458 RNASE7Q9H1E1 156 aaKnown RBP5.12□□□□□ -1.59
MSH5-217ENST00000494458 NRN1Q9NPD7 142 aa5.12□□□□□ -1.59
MSH5-217ENST00000494458 PGPEP1Q9NXJ5 209 aa5.12□□□□□ -1.59
MSH5-217ENST00000494458 FN1P02751 2386 aaKnown RBP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms