RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 LOXL1Q08397 574 aaPredicted RBP9.26□□□□□ -0.93
BRCA1-222ENST00000493919 AMTNQ6UX39 209 aa9.26□□□□□ -0.93
BRCA1-222ENST00000493919 ADAT3Q96EY9 351 aaPredicted RBP9.26□□□□□ -0.93
BRCA1-222ENST00000493919 GFI1Q99684 422 aa9.26□□□□□ -0.93
BRCA1-222ENST00000493919 GNB1LQ9BYB4 327 aa9.26□□□□□ -0.93
BRCA1-222ENST00000493919 TMEM222Q9H0R3 208 aa9.26□□□□□ -0.93
BRCA1-222ENST00000493919 MTORP42345 2549 aa9.25□□□□□ -0.93
BRCA1-222ENST00000493919 ZNF688P0C7X2 276 aa9.25□□□□□ -0.93
BRCA1-222ENST00000493919 INSL3P51460 131 aa9.25□□□□□ -0.93
BRCA1-222ENST00000493919 Q56UQ5 140 aa9.25□□□□□ -0.93
BRCA1-222ENST00000493919 C9orf153Q5TBE3 101 aa9.25□□□□□ -0.93
BRCA1-222ENST00000493919 GAPTQ8N292 157 aa9.25□□□□□ -0.93
BRCA1-222ENST00000493919 HEYLQ9NQ87 328 aaPredicted RBP9.25□□□□□ -0.93
BRCA1-222ENST00000493919 GNG13Q9P2W3 67 aa9.25□□□□□ -0.93
BRCA1-222ENST00000493919 RNF7Q9UBF6 113 aa9.25□□□□□ -0.93
BRCA1-222ENST00000493919 TCF19Q9Y242 345 aa9.25□□□□□ -0.93
BRCA1-222ENST00000493919 TRAV18A0A075B6X5 111 aa9.25□□□□□ -0.93
BRCA1-222ENST00000493919 M0QYG6 137 aa9.25□□□□□ -0.93
BRCA1-222ENST00000493919 UQCRQO14949 82 aa9.25□□□□□ -0.93
BRCA1-222ENST00000493919 BCL3P20749 454 aa9.25□□□□□ -0.93
BRCA1-222ENST00000493919 IER3P46695 156 aa9.25□□□□□ -0.93
BRCA1-222ENST00000493919 KHDC1LQ5JSQ8 128 aa9.25□□□□□ -0.93
BRCA1-222ENST00000493919 Q6ZSR3 168 aa9.25□□□□□ -0.93
BRCA1-222ENST00000493919 Q71RC1 249 aaPredicted RBP9.25□□□□□ -0.93
BRCA1-222ENST00000493919 C10orf126Q8N4M7 172 aa9.25□□□□□ -0.93
BRCA1-222ENST00000493919 C3orf22Q8N5N4 141 aa9.25□□□□□ -0.93
BRCA1-222ENST00000493919 LRTM2Q8N967 370 aa9.25□□□□□ -0.93
BRCA1-222ENST00000493919 LRRC29Q8WV35 223 aa9.25□□□□□ -0.93
BRCA1-222ENST00000493919 ARL2-SNX15V9GYD0 113 aa9.25□□□□□ -0.93
BRCA1-222ENST00000493919 ABCA2Q9BZC7 2435 aa9.25□□□□□ -0.93
BRCA1-222ENST00000493919 CSPG4Q6UVK1 2322 aa9.24□□□□□ -0.93
BRCA1-222ENST00000493919 E9PLD3 99 aa9.24□□□□□ -0.93
BRCA1-222ENST00000493919 M0R2P5 195 aa9.24□□□□□ -0.93
BRCA1-222ENST00000493919 SLC17A2O00624 439 aa9.24□□□□□ -0.93
BRCA1-222ENST00000493919 LCN12Q6JVE5 192 aa9.24□□□□□ -0.93
BRCA1-222ENST00000493919 MORN3Q6PF18 240 aaPredicted RBP9.24□□□□□ -0.93
BRCA1-222ENST00000493919 RNF144BQ7Z419 303 aa9.24□□□□□ -0.93
BRCA1-222ENST00000493919 HAPLN4Q86UW8 402 aa9.24□□□□□ -0.93
BRCA1-222ENST00000493919 DEFB108BQ8NET1 73 aa9.24□□□□□ -0.93
BRCA1-222ENST00000493919 OR9G1Q8NH87 305 aa9.24□□□□□ -0.93
BRCA1-222ENST00000493919 LINC00526Q96FQ7 95 aa9.24□□□□□ -0.93
BRCA1-222ENST00000493919 RETNQ9HD89 108 aa9.24□□□□□ -0.93
BRCA1-222ENST00000493919 KLF12Q9Y4X4 402 aa9.24□□□□□ -0.93
BRCA1-222ENST00000493919 FHL3Q13643 280 aa9.23□□□□□ -0.93
BRCA1-222ENST00000493919 RPS4Y2Q8TD47 263 aa9.23□□□□□ -0.93
BRCA1-222ENST00000493919 TSKUQ8WUA8 353 aa9.23□□□□□ -0.93
BRCA1-222ENST00000493919 BORCS8Q96FH0 119 aa9.23□□□□□ -0.93
BRCA1-222ENST00000493919 C9orf85Q96MD7 179 aa9.23□□□□□ -0.93
BRCA1-222ENST00000493919 OR2W1Q9Y3N9 320 aa9.23□□□□□ -0.93
BRCA1-222ENST00000493919 ANK3Q12955 4377 aaKnown RBP9.23□□□□□ -0.93
BRCA1-222ENST00000493919 IGHV3OR15-7A0A075B7D8 119 aa9.23□□□□□ -0.93
BRCA1-222ENST00000493919 MPDU1O75352 247 aa9.23□□□□□ -0.93
BRCA1-222ENST00000493919 CD164Q04900 197 aa9.23□□□□□ -0.93
BRCA1-222ENST00000493919 TEPPQ6URK8 271 aa9.23□□□□□ -0.93
BRCA1-222ENST00000493919 HOGA1Q86XE5 327 aa9.23□□□□□ -0.93
BRCA1-222ENST00000493919 C11orf53Q8IXP5 236 aa9.23□□□□□ -0.93
BRCA1-222ENST00000493919 ZNF665Q9H7R5 613 aa9.23□□□□□ -0.93
BRCA1-222ENST00000493919 ABCA1O95477 2261 aa9.22□□□□□ -0.93
BRCA1-222ENST00000493919 C2orf70A6NJV1 201 aa9.22□□□□□ -0.93
BRCA1-222ENST00000493919 FCN1O00602 326 aa9.22□□□□□ -0.93
BRCA1-222ENST00000493919 LY6G6DO95868 133 aa9.22□□□□□ -0.93
BRCA1-222ENST00000493919 ATP5G1P05496 136 aa9.22□□□□□ -0.93
BRCA1-222ENST00000493919 IGHV4-31P0DP07 118 aa9.22□□□□□ -0.93
BRCA1-222ENST00000493919 ATP5G3P48201 142 aa9.22□□□□□ -0.93
BRCA1-222ENST00000493919 RPS11P62280 158 aaKnown RBP eCLIP9.22□□□□□ -0.93
BRCA1-222ENST00000493919 FAM231DQ6ZW35 169 aa9.22□□□□□ -0.93
BRCA1-222ENST00000493919 SPACA5Q96QH8 159 aa9.22□□□□□ -0.93
BRCA1-222ENST00000493919 NSD1Q96L73 2696 aaPredicted RBP9.22□□□□□ -0.93
BRCA1-222ENST00000493919 IGKV1-9A0A0C4DH69 117 aa9.21□□□□□ -0.93
BRCA1-222ENST00000493919 FAM236DA0A1B0GTK5 79 aa9.21□□□□□ -0.93
BRCA1-222ENST00000493919 J3QT63 122 aa9.21□□□□□ -0.93
BRCA1-222ENST00000493919 FAM236CP0DP71 79 aa9.21□□□□□ -0.93
BRCA1-222ENST00000493919 TMEM258P61165 79 aa9.21□□□□□ -0.93
BRCA1-222ENST00000493919 ZNF90Q03938 601 aa9.21□□□□□ -0.93
BRCA1-222ENST00000493919 KRTAP1-1Q07627 177 aa9.21□□□□□ -0.93
BRCA1-222ENST00000493919 TMEM155Q4W5P6 130 aa9.21□□□□□ -0.93
BRCA1-222ENST00000493919 TAS2R4Q9NYW5 299 aa9.21□□□□□ -0.93
BRCA1-222ENST00000493919 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.21□□□□□ -0.943e-7■■■■■ 37.1
BRCA1-222ENST00000493919 IGKV1-27A0A075B6S5 117 aa9.21□□□□□ -0.94
BRCA1-222ENST00000493919 A0A1W2PPK0 400 aa9.21□□□□□ -0.94
BRCA1-222ENST00000493919 SRRM5B3KS81 715 aa9.21□□□□□ -0.94
BRCA1-222ENST00000493919 DPM2O94777 84 aa9.21□□□□□ -0.94
BRCA1-222ENST00000493919 NCR2O95944 276 aa9.21□□□□□ -0.94
BRCA1-222ENST00000493919 TAS2R45P59539 299 aa9.21□□□□□ -0.94
BRCA1-222ENST00000493919 LMO4P61968 165 aa9.21□□□□□ -0.94
BRCA1-222ENST00000493919 FAM90A1Q86YD7 464 aa9.21□□□□□ -0.94
BRCA1-222ENST00000493919 ZFHX3Q15911 3703 aa9.2□□□□□ -0.94
BRCA1-222ENST00000493919 FAM166AQ6J272 317 aa9.2□□□□□ -0.94
BRCA1-222ENST00000493919 RAB37Q96AX2 223 aa9.2□□□□□ -0.94
BRCA1-222ENST00000493919 LINC00479Q96M42 142 aa9.2□□□□□ -0.94
BRCA1-222ENST00000493919 SONP18583 2426 aaKnown RBP9.19□□□□□ -0.94
BRCA1-222ENST00000493919 HIVEP2P31629 2446 aa9.19□□□□□ -0.94
BRCA1-222ENST00000493919 TRBV5-5A0A0J9YX44 114 aa9.19□□□□□ -0.94
BRCA1-222ENST00000493919 CEBPZOSA8MTT3 80 aa9.19□□□□□ -0.94
BRCA1-222ENST00000493919 B4DSR2 109 aa9.19□□□□□ -0.94
BRCA1-222ENST00000493919 LHBP01229 141 aa9.19□□□□□ -0.94
BRCA1-222ENST00000493919 RBP4P02753 201 aa9.19□□□□□ -0.94
BRCA1-222ENST00000493919 EBLN2Q6P2I7 272 aa9.19□□□□□ -0.94
BRCA1-222ENST00000493919 LYPD2Q6UXB3 125 aa9.19□□□□□ -0.94
BRCA1-222ENST00000493919 LINC01356Q8N9X3 169 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms