RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 YPEL3P61236 119 aaPredicted RBP2.38□□□□□ -2.03
GTF3A-208ENST00000493903 PABPC1L2AQ5JQF8 200 aa2.38□□□□□ -2.03
GTF3A-208ENST00000493903 DOPEY1Q5JWR5 2465 aa2.38□□□□□ -2.03
GTF3A-208ENST00000493903 TMEM78Q5T7P6 136 aa2.38□□□□□ -2.03
GTF3A-208ENST00000493903 LYZL1Q6UWQ5 148 aa2.38□□□□□ -2.03
GTF3A-208ENST00000493903 LCA10Q71F78 164 aa2.38□□□□□ -2.03
GTF3A-208ENST00000493903 ZNF767PQ75MW2 155 aa2.38□□□□□ -2.03
GTF3A-208ENST00000493903 C10orf126Q8N4M7 172 aa2.38□□□□□ -2.03
GTF3A-208ENST00000493903 OR5C1Q8NGR4 320 aa2.38□□□□□ -2.03
GTF3A-208ENST00000493903 TVP23CQ96ET8 276 aa2.38□□□□□ -2.03
GTF3A-208ENST00000493903 LYSMD1Q96S90 227 aa2.38□□□□□ -2.03
GTF3A-208ENST00000493903 IMMP2LQ96T52 175 aa2.38□□□□□ -2.03
GTF3A-208ENST00000493903 SERPINI1Q99574 410 aa2.38□□□□□ -2.03
GTF3A-208ENST00000493903 SLC39A9Q9NUM3 307 aa2.38□□□□□ -2.03
GTF3A-208ENST00000493903 MED29Q9NX70 200 aa2.38□□□□□ -2.03
GTF3A-208ENST00000493903 NDUFAF1Q9Y375 327 aa2.38□□□□□ -2.03
GTF3A-208ENST00000493903 TIMM22Q9Y584 194 aa2.38□□□□□ -2.03
GTF3A-208ENST00000493903 U3KQA8 63 aa2.38□□□□□ -2.03
GTF3A-208ENST00000493903 IGKV2-24A0A0C4DH68 120 aa2.37□□□□□ -2.03
GTF3A-208ENST00000493903 CLDN25C9JDP6 229 aa2.37□□□□□ -2.03
GTF3A-208ENST00000493903 ORC5O43913 435 aa2.37□□□□□ -2.03
GTF3A-208ENST00000493903 PFDN1O60925 122 aa2.37□□□□□ -2.03
GTF3A-208ENST00000493903 APOA2P02652 100 aa2.37□□□□□ -2.03
GTF3A-208ENST00000493903 BPGMP07738 259 aa2.37□□□□□ -2.03
GTF3A-208ENST00000493903 NBEAP1P0C6P0 100 aa2.37□□□□□ -2.03
GTF3A-208ENST00000493903 S100A4P26447 101 aaKnown RBP2.37□□□□□ -2.03
GTF3A-208ENST00000493903 CDC42P60953 191 aa2.37□□□□□ -2.03
GTF3A-208ENST00000493903 BAMBIQ13145 260 aa2.37□□□□□ -2.03
GTF3A-208ENST00000493903 RHEBQ15382 184 aa2.37□□□□□ -2.03
GTF3A-208ENST00000493903 TRAPPC6BQ86SZ2 158 aa2.37□□□□□ -2.03
GTF3A-208ENST00000493903 OR5J2Q8NH18 312 aa2.37□□□□□ -2.03
GTF3A-208ENST00000493903 OR4C6Q8NH72 309 aa2.37□□□□□ -2.03
GTF3A-208ENST00000493903 TUBA4BQ9H853 241 aa2.37□□□□□ -2.03
GTF3A-208ENST00000493903 AMMECR1Q9Y4X0 333 aaPredicted RBP2.37□□□□□ -2.03
GTF3A-208ENST00000493903 TIMM9Q9Y5J7 89 aa2.37□□□□□ -2.03
GTF3A-208ENST00000493903 NF1P21359 2839 aa2.37□□□□□ -2.03
GTF3A-208ENST00000493903 SPTBN1Q01082 2364 aaKnown RBP2.37□□□□□ -2.03
GTF3A-208ENST00000493903 C2CD3Q4AC94 2353 aa2.37□□□□□ -2.03
GTF3A-208ENST00000493903 CREBBPQ92793 2442 aa2.37□□□□□ -2.03
GTF3A-208ENST00000493903 NBASA2RRP1 2371 aa2.36□□□□□ -2.03
GTF3A-208ENST00000493903 IGLV10-54A0A075B6I4 117 aa2.36□□□□□ -2.03
GTF3A-208ENST00000493903 TRAV7A0A075B6U4 112 aa2.36□□□□□ -2.03
GTF3A-208ENST00000493903 MAP1LC3B2A6NCE7 125 aa2.36□□□□□ -2.03
GTF3A-208ENST00000493903 ODF3BA8MYP8 253 aa2.36□□□□□ -2.03
GTF3A-208ENST00000493903 TSTD3H0UI37 97 aa2.36□□□□□ -2.03
GTF3A-208ENST00000493903 TRAPPC2LH3BP13 241 aa2.36□□□□□ -2.03
GTF3A-208ENST00000493903 H3BT86 120 aa2.36□□□□□ -2.03
GTF3A-208ENST00000493903 SLC22A1O15245 554 aa2.36□□□□□ -2.03
GTF3A-208ENST00000493903 ZNF73O43830 326 aaPredicted RBP2.36□□□□□ -2.03
GTF3A-208ENST00000493903 RNASE2P10153 161 aaKnown RBP2.36□□□□□ -2.03
GTF3A-208ENST00000493903 RPL28P46779 137 aaKnown RBP2.36□□□□□ -2.03
GTF3A-208ENST00000493903 EVX1P49640 407 aa2.36□□□□□ -2.03
GTF3A-208ENST00000493903 DEFA3P59666 94 aa2.36□□□□□ -2.03
GTF3A-208ENST00000493903 FOXF1Q12946 379 aa2.36□□□□□ -2.03
GTF3A-208ENST00000493903 ZNF720Q7Z2F6 126 aa2.36□□□□□ -2.03
GTF3A-208ENST00000493903 LYPD1Q8N2G4 141 aa2.36□□□□□ -2.03
GTF3A-208ENST00000493903 RPP25LQ8N5L8 163 aaKnown RBP2.36□□□□□ -2.03
GTF3A-208ENST00000493903 NUP35Q8NFH5 326 aa2.36□□□□□ -2.03
GTF3A-208ENST00000493903 TERB2Q8NHR7 220 aa2.36□□□□□ -2.03
GTF3A-208ENST00000493903 WFDC5Q8TCV5 224 aa2.36□□□□□ -2.03
GTF3A-208ENST00000493903 PLEKHB2Q96CS7 222 aa2.36□□□□□ -2.03
GTF3A-208ENST00000493903 SCGB3A1Q96QR1 104 aa2.36□□□□□ -2.03
GTF3A-208ENST00000493903 MAP1LC3BQ9GZQ8 125 aa2.36□□□□□ -2.03
GTF3A-208ENST00000493903 NAT8Q9UHE5 227 aa2.36□□□□□ -2.03
GTF3A-208ENST00000493903 HHLA3Q9XRX5 114 aa2.36□□□□□ -2.03
GTF3A-208ENST00000493903 ERGIC3Q9Y282 383 aa2.36□□□□□ -2.03
GTF3A-208ENST00000493903 ARHGAP32A7KAX9 2087 aa2.36□□□□□ -2.03
GTF3A-208ENST00000493903 ZFHX3Q15911 3703 aa2.36□□□□□ -2.03
GTF3A-208ENST00000493903 ICE1Q9Y2F5 2266 aa2.35□□□□□ -2.03
GTF3A-208ENST00000493903 CENPEQ02224 2701 aa2.35□□□□□ -2.03
GTF3A-208ENST00000493903 CSMD2Q7Z408 3487 aa2.35□□□□□ -2.03
GTF3A-208ENST00000493903 FBN3Q75N90 2809 aa2.35□□□□□ -2.03
GTF3A-208ENST00000493903 ADGRG4Q8IZF6 3080 aa2.35□□□□□ -2.03
GTF3A-208ENST00000493903 MALRD1Q5VYJ5 2156 aa2.35□□□□□ -2.03
GTF3A-208ENST00000493903 RIIAD1A6NNX1 92 aa2.35□□□□□ -2.03
GTF3A-208ENST00000493903 PIAS1O75925 651 aa2.35□□□□□ -2.03
GTF3A-208ENST00000493903 CTSGP08311 255 aa2.35□□□□□ -2.03
GTF3A-208ENST00000493903 RRN3P1Q2M238 152 aa2.35□□□□□ -2.03
GTF3A-208ENST00000493903 LINC01554Q52M75 96 aa2.35□□□□□ -2.03
GTF3A-208ENST00000493903 DCUN1D2Q6PH85 259 aa2.35□□□□□ -2.03
GTF3A-208ENST00000493903 IGFL3Q6UXB1 125 aa2.35□□□□□ -2.03
GTF3A-208ENST00000493903 TOMM20LQ6UXN7 152 aa2.35□□□□□ -2.03
GTF3A-208ENST00000493903 MIR17HGQ75NE6 70 aa2.35□□□□□ -2.03
GTF3A-208ENST00000493903 SLC35E3Q7Z769 313 aa2.35□□□□□ -2.03
GTF3A-208ENST00000493903 KTN1-AS1Q86SY8 53 aa2.35□□□□□ -2.03
GTF3A-208ENST00000493903 FAM24BQ8N5W8 94 aa2.35□□□□□ -2.03
GTF3A-208ENST00000493903 Q8NDZ9 215 aa2.35□□□□□ -2.03
GTF3A-208ENST00000493903 OR10K1Q8NGX5 313 aa2.35□□□□□ -2.03
GTF3A-208ENST00000493903 DYDC1Q8WWB3 177 aa2.35□□□□□ -2.03
GTF3A-208ENST00000493903 KRTAP4-4Q9BYR3 166 aa2.35□□□□□ -2.03
GTF3A-208ENST00000493903 TMEM133Q9H2Q1 129 aa2.35□□□□□ -2.03
GTF3A-208ENST00000493903 ITPR3Q14573 2671 aa2.35□□□□□ -2.03
GTF3A-208ENST00000493903 CELSR2Q9HCU4 2923 aa2.35□□□□□ -2.03
GTF3A-208ENST00000493903 HEATR5AQ86XA9 2040 aa2.35□□□□□ -2.03
GTF3A-208ENST00000493903 CELSR1Q9NYQ6 3014 aa2.35□□□□□ -2.03
GTF3A-208ENST00000493903 MYH10P35580 1976 aa2.34□□□□□ -2.03
GTF3A-208ENST00000493903 IGHV3-64A0A075B6Q5 118 aa2.34□□□□□ -2.03
GTF3A-208ENST00000493903 A0A1W2PNN7 141 aa2.34□□□□□ -2.03
GTF3A-208ENST00000493903 DUXBA0A1W2PPF3 345 aa2.34□□□□□ -2.03
GTF3A-208ENST00000493903 H7C2G1 150 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms