RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 RPUSD4Q96CM3 377 aaKnown RBP13.15□□□□□ -0.31
PDLIM7-208ENST00000493815 HLA-DRB4X5D2U9 266 aa13.15□□□□□ -0.31
PDLIM7-208ENST00000493815 A0A0J9YX75 114 aa13.14□□□□□ -0.31
PDLIM7-208ENST00000493815 ZNF253O75346 499 aa13.14□□□□□ -0.31
PDLIM7-208ENST00000493815 C4BPBP20851 252 aa13.14□□□□□ -0.31
PDLIM7-208ENST00000493815 GCHFRP30047 84 aa13.14□□□□□ -0.31
PDLIM7-208ENST00000493815 TMPRSS5Q9H3S3 457 aa13.14□□□□□ -0.31
PDLIM7-208ENST00000493815 RETNQ9HD89 108 aa13.14□□□□□ -0.31
PDLIM7-208ENST00000493815 UMAD1C9J7I0 102 aa13.13□□□□□ -0.31
PDLIM7-208ENST00000493815 CXorf1O96002 111 aa13.13□□□□□ -0.31
PDLIM7-208ENST00000493815 PSG9Q00887 426 aa13.13□□□□□ -0.31
PDLIM7-208ENST00000493815 A0A1B0GV50 99 aa13.12□□□□□ -0.31
PDLIM7-208ENST00000493815 MAP1LC3B2A6NCE7 125 aa13.12□□□□□ -0.31
PDLIM7-208ENST00000493815 HIST1H1AQ02539 215 aaPredicted RBP13.12□□□□□ -0.31
PDLIM7-208ENST00000493815 FAM74A1Q5RGS3 127 aa13.12□□□□□ -0.31
PDLIM7-208ENST00000493815 MAP1LC3BQ9GZQ8 125 aa13.12□□□□□ -0.31
PDLIM7-208ENST00000493815 CSTL1Q9H114 145 aa13.12□□□□□ -0.31
PDLIM7-208ENST00000493815 Q9H3A6 140 aa13.12□□□□□ -0.31
PDLIM7-208ENST00000493815 AAMDCQ9H7C9 122 aa13.12□□□□□ -0.31
PDLIM7-208ENST00000493815 CNN1P51911 297 aaKnown RBP13.12□□□□□ -0.31
PDLIM7-208ENST00000493815 APOC4P55056 127 aa13.12□□□□□ -0.31
PDLIM7-208ENST00000493815 FXYD7P58549 80 aa13.12□□□□□ -0.31
PDLIM7-208ENST00000493815 OR8A1Q8NGG7 326 aa13.12□□□□□ -0.31
PDLIM7-208ENST00000493815 CA1P00915 261 aaPredicted RBP13.11□□□□□ -0.31
PDLIM7-208ENST00000493815 GIG44P09565 113 aaPredicted RBP13.11□□□□□ -0.31
PDLIM7-208ENST00000493815 EIF5AL1Q6IS14 154 aaKnown RBP13.11□□□□□ -0.31
PDLIM7-208ENST00000493815 SFT2D1Q8WV19 159 aa13.11□□□□□ -0.31
PDLIM7-208ENST00000493815 KIR2DL5BA0A0G2JN68 375 aa13.1□□□□□ -0.31
PDLIM7-208ENST00000493815 KIR2DL5BA0A0G2JPC4 375 aa13.1□□□□□ -0.31
PDLIM7-208ENST00000493815 DEFB135Q30KP9 77 aa13.1□□□□□ -0.31
PDLIM7-208ENST00000493815 ALKAL2Q6UX46 152 aa13.1□□□□□ -0.31
PDLIM7-208ENST00000493815 KIR2DL5AQ8N109 375 aa13.1□□□□□ -0.31
PDLIM7-208ENST00000493815 KIR2DL5BQ8NHK3 375 aa13.1□□□□□ -0.31
PDLIM7-208ENST00000493815 TM2D3Q9BRN9 247 aa13.1□□□□□ -0.31
PDLIM7-208ENST00000493815 SLC35B3Q9H1N7 401 aa13.1□□□□□ -0.31
PDLIM7-208ENST00000493815 CLEC5AQ9NY25 188 aa13.1□□□□□ -0.31
PDLIM7-208ENST00000493815 PGPA6NDG6 321 aa13.08□□□□□ -0.31
PDLIM7-208ENST00000493815 UBE2G2P60604 165 aa13.08□□□□□ -0.31
PDLIM7-208ENST00000493815 ERCC8Q13216 396 aa13.08□□□□□ -0.31
PDLIM7-208ENST00000493815 SUN5Q8TC36 379 aa13.08□□□□□ -0.31
PDLIM7-208ENST00000493815 TMEM167BQ9NRX6 74 aa13.08□□□□□ -0.31
PDLIM7-208ENST00000493815 XCL2Q9UBD3 114 aa13.08□□□□□ -0.31
PDLIM7-208ENST00000493815 HUWE1Q7Z6Z7 4374 aaKnown RBP13.08□□□□□ -0.31
PDLIM7-208ENST00000493815 TENM3Q9P273 2699 aa13.08□□□□□ -0.32
PDLIM7-208ENST00000493815 IGKV2-40A0A087WW87 121 aaPredicted RBP13.08□□□□□ -0.32
PDLIM7-208ENST00000493815 IGKV2D-40P01614 121 aaPredicted RBP13.08□□□□□ -0.32
PDLIM7-208ENST00000493815 SULT1A2P50226 295 aa13.08□□□□□ -0.32
PDLIM7-208ENST00000493815 DPPA3Q6W0C5 159 aa13.08□□□□□ -0.32
PDLIM7-208ENST00000493815 LYPD1Q8N2G4 141 aa13.08□□□□□ -0.32
PDLIM7-208ENST00000493815 OR10J6PQ8NGY7 276 aa13.08□□□□□ -0.32
PDLIM7-208ENST00000493815 MRPL53Q96EL3 112 aaKnown RBP13.08□□□□□ -0.32
PDLIM7-208ENST00000493815 RPH3ALQ9UNE2 315 aa13.08□□□□□ -0.32
PDLIM7-208ENST00000493815 PRELID1Q9Y255 219 aa13.08□□□□□ -0.32
PDLIM7-208ENST00000493815 DUSP14O95147 198 aaKnown RBP13.07□□□□□ -0.32
PDLIM7-208ENST00000493815 H2AFB1P0C5Y9 115 aa13.07□□□□□ -0.32
PDLIM7-208ENST00000493815 AMTNQ6UX39 209 aa13.07□□□□□ -0.32
PDLIM7-208ENST00000493815 MBD3L1Q8WWY6 194 aa13.07□□□□□ -0.32
PDLIM7-208ENST00000493815 OTORQ9NRC9 128 aa13.07□□□□□ -0.32
PDLIM7-208ENST00000493815 YTHDF2Q9Y5A9 579 aaKnown RBP13.07□□□□□ -0.32
PDLIM7-208ENST00000493815 M0R2Z0 102 aa13.06□□□□□ -0.32
PDLIM7-208ENST00000493815 NHLRC4P0CG21 123 aaPredicted RBP13.06□□□□□ -0.32
PDLIM7-208ENST00000493815 RAB5CP51148 216 aa13.06□□□□□ -0.32
PDLIM7-208ENST00000493815 GNG5P63218 68 aa13.06□□□□□ -0.32
PDLIM7-208ENST00000493815 MORN3Q6PF18 240 aaPredicted RBP13.06□□□□□ -0.32
PDLIM7-208ENST00000493815 SPATA25Q9BR10 227 aa13.06□□□□□ -0.32
PDLIM7-208ENST00000493815 ZMAT4Q9H898 229 aa13.06□□□□□ -0.32
PDLIM7-208ENST00000493815 A8MTW9 85 aa13.05□□□□□ -0.32
PDLIM7-208ENST00000493815 GGTLC3B5MD39 225 aa13.05□□□□□ -0.32
PDLIM7-208ENST00000493815 UBE2CO00762 179 aa13.05□□□□□ -0.32
PDLIM7-208ENST00000493815 NUTF2P61970 127 aaKnown RBP13.05□□□□□ -0.32
PDLIM7-208ENST00000493815 SPINK13Q1W4C9 94 aa13.05□□□□□ -0.32
PDLIM7-208ENST00000493815 VGLL1Q99990 258 aa13.05□□□□□ -0.32
PDLIM7-208ENST00000493815 OVOL2Q9BRP0 275 aa13.05□□□□□ -0.32
PDLIM7-208ENST00000493815 CSN1S1P47710 185 aa13.05□□□□□ -0.32
PDLIM7-208ENST00000493815 SUMO1P63165 101 aaKnown RBP13.05□□□□□ -0.32
PDLIM7-208ENST00000493815 CCL20P78556 96 aa13.05□□□□□ -0.32
PDLIM7-208ENST00000493815 Q6ZWC4 215 aa13.05□□□□□ -0.32
PDLIM7-208ENST00000493815 CMTM2Q8TAZ6 248 aa13.05□□□□□ -0.32
PDLIM7-208ENST00000493815 CLUHP3Q96NS8 147 aa13.05□□□□□ -0.32
PDLIM7-208ENST00000493815 PPP1R14DQ9NXH3 145 aa13.05□□□□□ -0.32
PDLIM7-208ENST00000493815 ZNF705EA8MWA4 302 aaPredicted RBP13.04□□□□□ -0.32
PDLIM7-208ENST00000493815 SLC25A5P05141 298 aaKnown RBP13.04□□□□□ -0.32
PDLIM7-208ENST00000493815 CT45A10P0DMU9 189 aa13.04□□□□□ -0.32
PDLIM7-208ENST00000493815 RCHY1Q96PM5 261 aa13.04□□□□□ -0.32
PDLIM7-208ENST00000493815 AGPAT4-IT1Q9H0P7 198 aa13.04□□□□□ -0.32
PDLIM7-208ENST00000493815 TRAV12-2A0A075B6T6 113 aa13.03□□□□□ -0.32
PDLIM7-208ENST00000493815 FAM74A7A6NL05 159 aa13.03□□□□□ -0.32
PDLIM7-208ENST00000493815 DIRC3C9JPN6 131 aa13.03□□□□□ -0.32
PDLIM7-208ENST00000493815 NPIPB6E9PJ23 425 aa13.03□□□□□ -0.32
PDLIM7-208ENST00000493815 SPRY2O43597 315 aa13.03□□□□□ -0.32
PDLIM7-208ENST00000493815 RNF183Q96D59 192 aa13.03□□□□□ -0.32
PDLIM7-208ENST00000493815 J3KRW8 73 aa13.02□□□□□ -0.32
PDLIM7-208ENST00000493815 KIR3DS1Q14943 382 aa13.02□□□□□ -0.32
PDLIM7-208ENST00000493815 GOLT1AQ6ZVE7 132 aa13.02□□□□□ -0.32
PDLIM7-208ENST00000493815 CSNK1G2-AS1Q8NCQ2 148 aa13.02□□□□□ -0.32
PDLIM7-208ENST00000493815 RXFP4Q8TDU9 374 aa13.02□□□□□ -0.32
PDLIM7-208ENST00000493815 A0A1W2PRE2 83 aa13.02□□□□□ -0.33
PDLIM7-208ENST00000493815 Q8TAT8 98 aa13.02□□□□□ -0.33
PDLIM7-208ENST00000493815 U3KQK5 164 aa13.02□□□□□ -0.33
PDLIM7-208ENST00000493815 PAGE4O60829 102 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms