RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 TAX1BP3O14907 124 aa6.32□□□□□ -1.4
BRCA1-221ENST00000493795 SAA4P35542 130 aa6.32□□□□□ -1.4
BRCA1-221ENST00000493795 XCL1P47992 114 aa6.32□□□□□ -1.4
BRCA1-221ENST00000493795 LINC01545Q5VT33 79 aa6.32□□□□□ -1.4
BRCA1-221ENST00000493795 DYNAPQ8N1N2 210 aa6.32□□□□□ -1.4
BRCA1-221ENST00000493795 ZFC3H1O60293 1989 aaKnown RBP6.32□□□□□ -1.4
BRCA1-221ENST00000493795 SPAG17Q6Q759 2223 aa6.32□□□□□ -1.4
BRCA1-221ENST00000493795 GATA3P23771 443 aa6.32□□□□□ -1.4
BRCA1-221ENST00000493795 ZNF134P52741 427 aa6.32□□□□□ -1.4
BRCA1-221ENST00000493795 BUB3O43684 328 aa6.32□□□□□ -1.4
BRCA1-221ENST00000493795 LY6DQ14210 128 aa6.32□□□□□ -1.4
BRCA1-221ENST00000493795 DOCK1Q14185 1865 aa6.32□□□□□ -1.4
BRCA1-221ENST00000493795 TRBV19A0A075B6N1 114 aa6.32□□□□□ -1.4
BRCA1-221ENST00000493795 H0YGX0 51 aa6.32□□□□□ -1.4
BRCA1-221ENST00000493795 SPTSSBQ8NFR3 76 aa6.32□□□□□ -1.4
BRCA1-221ENST00000493795 GFI1Q99684 422 aa6.32□□□□□ -1.4
BRCA1-221ENST00000493795 SIGLEC8Q9NYZ4 499 aa6.32□□□□□ -1.4
BRCA1-221ENST00000493795 MBD3L4A6NDZ8 208 aaPredicted RBP6.31□□□□□ -1.4
BRCA1-221ENST00000493795 MBD3L3A6NE82 208 aaPredicted RBP6.31□□□□□ -1.4
BRCA1-221ENST00000493795 MBD3L5A6NJ08 208 aaPredicted RBP6.31□□□□□ -1.4
BRCA1-221ENST00000493795 C8orf86Q6ZUL3 223 aa6.31□□□□□ -1.4
BRCA1-221ENST00000493795 MBD3L2Q8NHZ7 208 aaPredicted RBP6.31□□□□□ -1.4
BRCA1-221ENST00000493795 ZNF831Q5JPB2 1677 aa6.31□□□□□ -1.4
BRCA1-221ENST00000493795 TRPM6Q9BX84 2022 aa6.31□□□□□ -1.4
BRCA1-221ENST00000493795 TAF1P21675 1872 aa6.31□□□□□ -1.4
BRCA1-221ENST00000493795 ZFP2Q6ZN57 461 aa6.31□□□□□ -1.4
BRCA1-221ENST00000493795 TRAV4A0A0B4J268 109 aa6.31□□□□□ -1.4
BRCA1-221ENST00000493795 PRSS47A8MTI9 375 aa6.31□□□□□ -1.4
BRCA1-221ENST00000493795 ATP6V0E1O15342 81 aa6.31□□□□□ -1.4
BRCA1-221ENST00000493795 IGLL1P15814 213 aa6.31□□□□□ -1.4
BRCA1-221ENST00000493795 AMTNQ6UX39 209 aa6.31□□□□□ -1.4
BRCA1-221ENST00000493795 C9orf47Q6ZRZ4 202 aa6.31□□□□□ -1.4
BRCA1-221ENST00000493795 COX7B2Q8TF08 81 aa6.31□□□□□ -1.4
BRCA1-221ENST00000493795 Q9H8V8 135 aa6.31□□□□□ -1.4
BRCA1-221ENST00000493795 IGLV3-12A0A075B6K2 115 aa6.31□□□□□ -1.4
BRCA1-221ENST00000493795 IGKV1-27A0A075B6S5 117 aa6.31□□□□□ -1.4
BRCA1-221ENST00000493795 IGKV3D-7A0A0C4DH55 119 aa6.31□□□□□ -1.4
BRCA1-221ENST00000493795 SMIM27A0A1W2PRY6 76 aa6.3□□□□□ -1.4
BRCA1-221ENST00000493795 J3QRE1 110 aa6.3□□□□□ -1.4
BRCA1-221ENST00000493795 NDUFA4O00483 81 aa6.3□□□□□ -1.4
BRCA1-221ENST00000493795 PRDM6Q9NQX0 595 aa6.3□□□□□ -1.4
BRCA1-221ENST00000493795 MRPL36Q9P0J6 103 aaKnown RBP6.3□□□□□ -1.4
BRCA1-221ENST00000493795 SCN7AQ01118 1682 aa6.3□□□□□ -1.4
BRCA1-221ENST00000493795 PINLYPA6NC86 204 aa6.3□□□□□ -1.4
BRCA1-221ENST00000493795 SPACA3Q8IXA5 215 aa6.3□□□□□ -1.4
BRCA1-221ENST00000493795 SCN9AQ15858 1988 aa6.3□□□□□ -1.4
BRCA1-221ENST00000493795 A0A087WV48 116 aa6.3□□□□□ -1.4
BRCA1-221ENST00000493795 UBE2AP49459 152 aa6.3□□□□□ -1.4
BRCA1-221ENST00000493795 CFHR1Q03591 330 aa6.3□□□□□ -1.4
BRCA1-221ENST00000493795 RNASE13Q5GAN3 156 aaKnown RBP6.3□□□□□ -1.4
BRCA1-221ENST00000493795 Q6ZWC4 215 aa6.3□□□□□ -1.4
BRCA1-221ENST00000493795 CSRP1P21291 193 aaKnown RBP6.3□□□□□ -1.4
BRCA1-221ENST00000493795 Q6P435 159 aa6.3□□□□□ -1.4
BRCA1-221ENST00000493795 OPRPNQ99935 248 aaPredicted RBP6.3□□□□□ -1.4
BRCA1-221ENST00000493795 LY75O60449 1722 aa6.3□□□□□ -1.4
BRCA1-221ENST00000493795 QSER1Q2KHR3 1735 aa6.3□□□□□ -1.4
BRCA1-221ENST00000493795 FAM236AA0A1B0GUQ0 79 aa6.3□□□□□ -1.4
BRCA1-221ENST00000493795 FAM236BA0A1B0GV22 79 aa6.3□□□□□ -1.4
BRCA1-221ENST00000493795 C9JQL5 133 aa6.3□□□□□ -1.4
BRCA1-221ENST00000493795 IL15RAQ13261 267 aa6.3□□□□□ -1.4
BRCA1-221ENST00000493795 FAM231DQ6ZW35 169 aa6.3□□□□□ -1.4
BRCA1-221ENST00000493795 PRR25Q96S07 402 aa6.3□□□□□ -1.4
BRCA1-221ENST00000493795 CAMK2N2Q96S95 79 aa6.3□□□□□ -1.4
BRCA1-221ENST00000493795 GNLYP22749 145 aa6.29□□□□□ -1.4
BRCA1-221ENST00000493795 UBE2E1P51965 193 aa6.29□□□□□ -1.4
BRCA1-221ENST00000493795 FOXE3Q13461 319 aa6.29□□□□□ -1.4
BRCA1-221ENST00000493795 MLANAQ16655 118 aa6.29□□□□□ -1.4
BRCA1-221ENST00000493795 RUSC1-AS1Q66K80 236 aa6.29□□□□□ -1.4
BRCA1-221ENST00000493795 MESP1Q9BRJ9 268 aa6.29□□□□□ -1.4
BRCA1-221ENST00000493795 A0A1B0GUS0 222 aa6.29□□□□□ -1.4
BRCA1-221ENST00000493795 IGLL5B9A064 214 aa6.29□□□□□ -1.4
BRCA1-221ENST00000493795 MRPL53Q96EL3 112 aaKnown RBP6.29□□□□□ -1.4
BRCA1-221ENST00000493795 AHDC1Q5TGY3 1603 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-221ENST00000493795 ABCA3Q99758 1704 aa6.29□□□□□ -1.4
BRCA1-221ENST00000493795 H3BRN7 92 aa6.29□□□□□ -1.4
BRCA1-221ENST00000493795 CASC2Q6XLA1 102 aa6.29□□□□□ -1.4
BRCA1-221ENST00000493795 ZNF493Q6ZR52 646 aa6.29□□□□□ -1.4
BRCA1-221ENST00000493795 TMEM14CQ9P0S9 112 aa6.29□□□□□ -1.4
BRCA1-221ENST00000493795 LRP5O75197 1615 aa6.29□□□□□ -1.4
BRCA1-221ENST00000493795 NDUFS7O75251 213 aa6.29□□□□□ -1.4
BRCA1-221ENST00000493795 MSMBP08118 114 aa6.29□□□□□ -1.4
BRCA1-221ENST00000493795 Q6ZS49 121 aa6.29□□□□□ -1.4
BRCA1-221ENST00000493795 Q9HAA7 133 aa6.29□□□□□ -1.4
BRCA1-221ENST00000493795 SIGLEC1Q9BZZ2 1709 aa6.29□□□□□ -1.4
BRCA1-221ENST00000493795 ECM29Q5VYK3 1845 aa6.29□□□□□ -1.4
BRCA1-221ENST00000493795 IGKV1D-17A0A075B6S4 117 aa6.28□□□□□ -1.4
BRCA1-221ENST00000493795 K7EMI3 77 aa6.28□□□□□ -1.4
BRCA1-221ENST00000493795 LYPD3O95274 346 aa6.28□□□□□ -1.4
BRCA1-221ENST00000493795 Q6ZQT7 251 aa6.28□□□□□ -1.4
BRCA1-221ENST00000493795 BPESC1Q9GZL8 116 aa6.28□□□□□ -1.4
BRCA1-221ENST00000493795 ETV2O00321 342 aaPredicted RBP6.28□□□□□ -1.4
BRCA1-221ENST00000493795 COL8A2P25067 703 aa6.28□□□□□ -1.4
BRCA1-221ENST00000493795 ZFP36L1Q07352 338 aaKnown RBP6.28□□□□□ -1.4
BRCA1-221ENST00000493795 MIA3Q5JRA6 1907 aa6.28□□□□□ -1.4
BRCA1-221ENST00000493795 LINC01620Q4KN68 170 aa6.28□□□□□ -1.4
BRCA1-221ENST00000493795 LYPD2Q6UXB3 125 aa6.28□□□□□ -1.4
BRCA1-221ENST00000493795 ICOSQ9Y6W8 199 aa6.28□□□□□ -1.4
BRCA1-221ENST00000493795 V9GYV3 84 aa6.28□□□□□ -1.4
BRCA1-221ENST00000493795 GLI3P10071 1580 aa6.28□□□□□ -1.4
BRCA1-221ENST00000493795 A0A0J9YY99 117 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms