RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 TCF24Q7RTU0 167 aa9.11□□□□□ -0.95
UPF3A-210ENST00000493727 PAXXQ9BUH6 204 aa9.11□□□□□ -0.95
UPF3A-210ENST00000493727 OR51M1Q9H341 326 aa9.11□□□□□ -0.95
UPF3A-210ENST00000493727 SIGLEC8Q9NYZ4 499 aa9.11□□□□□ -0.95
UPF3A-210ENST00000493727 FRAS1Q86XX4 4008 aa9.1□□□□□ -0.95
UPF3A-210ENST00000493727 IGKV3-7A0A075B6H7 116 aa9.1□□□□□ -0.95
UPF3A-210ENST00000493727 HBE1P02100 147 aa9.1□□□□□ -0.95
UPF3A-210ENST00000493727 STAG3L2P0CL84 134 aa9.1□□□□□ -0.95
UPF3A-210ENST00000493727 STAG3L3P0CL85 134 aa9.1□□□□□ -0.95
UPF3A-210ENST00000493727 PYYP10082 97 aa9.1□□□□□ -0.95
UPF3A-210ENST00000493727 KRTAP10-2P60368 255 aa9.1□□□□□ -0.95
UPF3A-210ENST00000493727 IFITM2Q01629 132 aa9.1□□□□□ -0.95
UPF3A-210ENST00000493727 IL34Q6ZMJ4 242 aa9.1□□□□□ -0.95
UPF3A-210ENST00000493727 GLMPQ8WWB7 406 aa9.1□□□□□ -0.95
UPF3A-210ENST00000493727 SAT2Q96F10 170 aaPredicted RBP9.1□□□□□ -0.95
UPF3A-210ENST00000493727 C8orf49Q96NF6 230 aa9.1□□□□□ -0.95
UPF3A-210ENST00000493727 MLXQ9UH92 298 aa9.1□□□□□ -0.95
UPF3A-210ENST00000493727 IGLV1-51P01701 117 aa9.09□□□□□ -0.95
UPF3A-210ENST00000493727 SNRPCP09234 159 aaKnown RBP9.09□□□□□ -0.95
UPF3A-210ENST00000493727 OR10J4P0C629 311 aa9.09□□□□□ -0.95
UPF3A-210ENST00000493727 RBPMS2Q6ZRY4 209 aaKnown RBP9.09□□□□□ -0.95
UPF3A-210ENST00000493727 BLNKQ8WV28 456 aa9.09□□□□□ -0.95
UPF3A-210ENST00000493727 PCNPQ8WW12 178 aaKnown RBP9.09□□□□□ -0.95
UPF3A-210ENST00000493727 FAM167A-AS1Q96KT0 104 aa9.09□□□□□ -0.95
UPF3A-210ENST00000493727 TMEM14CQ9P0S9 112 aa9.09□□□□□ -0.95
UPF3A-210ENST00000493727 A8MZ25 164 aa9.08□□□□□ -0.96
UPF3A-210ENST00000493727 DNASE2O00115 360 aaPredicted RBP9.08□□□□□ -0.96
UPF3A-210ENST00000493727 GCHFRP30047 84 aa9.08□□□□□ -0.96
UPF3A-210ENST00000493727 GAGE13Q4V321 117 aa9.08□□□□□ -0.96
UPF3A-210ENST00000493727 ADAMTSL5Q6ZMM2 481 aa9.08□□□□□ -0.96
UPF3A-210ENST00000493727 OR2K2Q8NGT1 345 aa9.08□□□□□ -0.96
UPF3A-210ENST00000493727 MBD3L1Q8WWY6 194 aa9.08□□□□□ -0.96
UPF3A-210ENST00000493727 TM2D3Q9BRN9 247 aa9.08□□□□□ -0.96
UPF3A-210ENST00000493727 HRH4Q9H3N8 390 aa9.08□□□□□ -0.96
UPF3A-210ENST00000493727 TMEM167BQ9NRX6 74 aa9.08□□□□□ -0.96
UPF3A-210ENST00000493727 H3BTX0 84 aa9.07□□□□□ -0.96
UPF3A-210ENST00000493727 IGHV4-30-4P0DP06 118 aa9.07□□□□□ -0.96
UPF3A-210ENST00000493727 HIST1H1EP10412 219 aaKnown RBP9.07□□□□□ -0.96
UPF3A-210ENST00000493727 TFPI2P48307 235 aa9.07□□□□□ -0.96
UPF3A-210ENST00000493727 MEOX2P50222 304 aa9.07□□□□□ -0.96
UPF3A-210ENST00000493727 PAFAH1B2P68402 229 aa9.07□□□□□ -0.96
UPF3A-210ENST00000493727 DEFB114Q30KQ6 69 aa9.07□□□□□ -0.96
UPF3A-210ENST00000493727 CD300EQ496F6 205 aaPredicted RBP9.07□□□□□ -0.96
UPF3A-210ENST00000493727 GBGT1Q8N5D6 347 aa9.07□□□□□ -0.96
UPF3A-210ENST00000493727 TMPRSS5Q9H3S3 457 aa9.07□□□□□ -0.96
UPF3A-210ENST00000493727 NRN1Q9NPD7 142 aa9.07□□□□□ -0.96
UPF3A-210ENST00000493727 MRPS12O15235 138 aaKnown RBP9.06□□□□□ -0.96
UPF3A-210ENST00000493727 IFNA1P01562 189 aa9.06□□□□□ -0.96
UPF3A-210ENST00000493727 NMBP08949 121 aa9.06□□□□□ -0.96
UPF3A-210ENST00000493727 NBEAP1P0C6P0 100 aa9.06□□□□□ -0.96
UPF3A-210ENST00000493727 IGLC2P0DOY2 106 aa9.06□□□□□ -0.96
UPF3A-210ENST00000493727 PPT1P50897 306 aa9.06□□□□□ -0.96
UPF3A-210ENST00000493727 GUCA2BQ16661 112 aa9.06□□□□□ -0.96
UPF3A-210ENST00000493727 GUK1Q16774 197 aa9.06□□□□□ -0.96
UPF3A-210ENST00000493727 LCN12Q6JVE5 192 aa9.06□□□□□ -0.96
UPF3A-210ENST00000493727 Q6ZSN1 163 aa9.06□□□□□ -0.96
UPF3A-210ENST00000493727 GTSCR1Q86UQ5 136 aa9.06□□□□□ -0.96
UPF3A-210ENST00000493727 FXYD5Q96DB9 178 aa9.06□□□□□ -0.96
UPF3A-210ENST00000493727 ZNF503Q96F45 646 aa9.06□□□□□ -0.96
UPF3A-210ENST00000493727 GNG13Q9P2W3 67 aa9.06□□□□□ -0.96
UPF3A-210ENST00000493727 TRBV19A0A075B6N1 114 aa9.05□□□□□ -0.96
UPF3A-210ENST00000493727 A0A087X0K7 114 aa9.05□□□□□ -0.96
UPF3A-210ENST00000493727 TRAV1-1A0A0B4J248 108 aa9.05□□□□□ -0.96
UPF3A-210ENST00000493727 TRAV25A0A0B4J276 109 aa9.05□□□□□ -0.96
UPF3A-210ENST00000493727 H3BQ15 152 aa9.05□□□□□ -0.96
UPF3A-210ENST00000493727 PSMB3P49720 205 aa9.05□□□□□ -0.96
UPF3A-210ENST00000493727 UBE2G2P60604 165 aa9.05□□□□□ -0.96
UPF3A-210ENST00000493727 CLLU1Q5K131 121 aa9.05□□□□□ -0.96
UPF3A-210ENST00000493727 SAMD13Q5VXD3 122 aa9.05□□□□□ -0.96
UPF3A-210ENST00000493727 FAM90A2PQ658T7 463 aa9.05□□□□□ -0.96
UPF3A-210ENST00000493727 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.05□□□□□ -0.96
UPF3A-210ENST00000493727 TMEM61Q8N0U2 210 aa9.05□□□□□ -0.96
UPF3A-210ENST00000493727 MS4A6AQ9H2W1 248 aa9.05□□□□□ -0.96
UPF3A-210ENST00000493727 ZNF586Q9NXT0 402 aa9.05□□□□□ -0.96
UPF3A-210ENST00000493727 OR4C46A6NHA9 309 aa9.04□□□□□ -0.96
UPF3A-210ENST00000493727 TSPAN4O14817 238 aa9.04□□□□□ -0.96
UPF3A-210ENST00000493727 ID1P41134 155 aa9.04□□□□□ -0.96
UPF3A-210ENST00000493727 PSG9Q00887 426 aa9.04□□□□□ -0.96
UPF3A-210ENST00000493727 PDE6HQ13956 83 aa9.04□□□□□ -0.96
UPF3A-210ENST00000493727 C17orf77Q96MU5 243 aa9.04□□□□□ -0.96
UPF3A-210ENST00000493727 SLC50A1Q9BRV3 221 aa9.04□□□□□ -0.96
UPF3A-210ENST00000493727 KRTAP17-1Q9BYP8 105 aa9.04□□□□□ -0.96
UPF3A-210ENST00000493727 AAMDCQ9H7C9 122 aa9.04□□□□□ -0.96
UPF3A-210ENST00000493727 MANBALQ9NQG1 85 aa9.04□□□□□ -0.96
UPF3A-210ENST00000493727 SLC17A3O00476 420 aa9.03□□□□□ -0.96
UPF3A-210ENST00000493727 RANP62826 216 aaKnown RBP9.03□□□□□ -0.96
UPF3A-210ENST00000493727 CCL20P78556 96 aa9.03□□□□□ -0.96
UPF3A-210ENST00000493727 CST9LP1Q5W188 147 aa9.03□□□□□ -0.96
UPF3A-210ENST00000493727 ZFAND6Q6FIF0 208 aa9.03□□□□□ -0.96
UPF3A-210ENST00000493727 LINC00052Q96N35 136 aa9.03□□□□□ -0.96
UPF3A-210ENST00000493727 SPAG8Q99932 426 aaPredicted RBP9.03□□□□□ -0.96
UPF3A-210ENST00000493727 TUBA4BQ9H853 241 aa9.03□□□□□ -0.96
UPF3A-210ENST00000493727 EDA2RQ9HAV5 297 aa9.03□□□□□ -0.96
UPF3A-210ENST00000493727 TRAV2A0A0B4J234 112 aa9.02□□□□□ -0.97
UPF3A-210ENST00000493727 IZUMO1RA6ND01 250 aa9.02□□□□□ -0.97
UPF3A-210ENST00000493727 PAGE4O60829 102 aa9.02□□□□□ -0.97
UPF3A-210ENST00000493727 ZNF253O75346 499 aa9.02□□□□□ -0.97
UPF3A-210ENST00000493727 SNRPD3P62318 126 aaKnown RBP9.02□□□□□ -0.97
UPF3A-210ENST00000493727 HAGHQ16775 308 aa9.02□□□□□ -0.97
UPF3A-210ENST00000493727 CMTM2Q8TAZ6 248 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms