RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 GNG5P63218 68 aa9.52□□□□□ -0.89
VPS52-220ENST00000493674 DEFB114Q30KQ6 69 aa9.52□□□□□ -0.89
VPS52-220ENST00000493674 SAMD13Q5VXD3 122 aa9.52□□□□□ -0.89
VPS52-220ENST00000493674 SHISA2Q6UWI4 295 aa9.52□□□□□ -0.89
VPS52-220ENST00000493674 TRBV6-1A0A0K0K1D8 114 aa9.51□□□□□ -0.89
VPS52-220ENST00000493674 DIRC3C9JPN6 131 aa9.51□□□□□ -0.89
VPS52-220ENST00000493674 K7EQG2 157 aa9.51□□□□□ -0.89
VPS52-220ENST00000493674 IGLV2-11P01706 119 aa9.51□□□□□ -0.89
VPS52-220ENST00000493674 HLA-DMBP28068 263 aa9.51□□□□□ -0.89
VPS52-220ENST00000493674 RPL35P42766 123 aaKnown RBP9.51□□□□□ -0.89
VPS52-220ENST00000493674 GUCA2BQ16661 112 aa9.51□□□□□ -0.89
VPS52-220ENST00000493674 IGF2BP2-AS1Q96M15 143 aa9.51□□□□□ -0.89
VPS52-220ENST00000493674 SMIM7Q9BQ49 75 aa9.51□□□□□ -0.89
VPS52-220ENST00000493674 MS4A6AQ9H2W1 248 aa9.51□□□□□ -0.89
VPS52-220ENST00000493674 TRAV25A0A0B4J276 109 aa9.5□□□□□ -0.89
VPS52-220ENST00000493674 SERTM2A0A1B0GWG4 89 aa9.5□□□□□ -0.89
VPS52-220ENST00000493674 ZNF727A8MUV8 499 aa9.5□□□□□ -0.89
VPS52-220ENST00000493674 TSPAN4O14817 238 aa9.5□□□□□ -0.89
VPS52-220ENST00000493674 AKR1C3P42330 323 aa9.5□□□□□ -0.89
VPS52-220ENST00000493674 PSG3Q16557 428 aa9.5□□□□□ -0.89
VPS52-220ENST00000493674 TMEM183BQ1AE95 376 aa9.5□□□□□ -0.89
VPS52-220ENST00000493674 IGFL4Q6B9Z1 124 aa9.5□□□□□ -0.89
VPS52-220ENST00000493674 TMEM61Q8N0U2 210 aa9.5□□□□□ -0.89
VPS52-220ENST00000493674 RNF182Q8N6D2 247 aa9.5□□□□□ -0.89
VPS52-220ENST00000493674 C20orf173Q96LM9 149 aa9.5□□□□□ -0.89
VPS52-220ENST00000493674 TRRAPQ9Y4A5 3859 aa9.5□□□□□ -0.89
VPS52-220ENST00000493674 CMYA5Q8N3K9 4069 aa9.49□□□□□ -0.89
VPS52-220ENST00000493674 S100A9P06702 114 aaKnown RBP9.49□□□□□ -0.89
VPS52-220ENST00000493674 CNN1P51911 297 aaKnown RBP9.49□□□□□ -0.89
VPS52-220ENST00000493674 CEBPGP53567 150 aa9.49□□□□□ -0.89
VPS52-220ENST00000493674 TAS2R60P59551 318 aa9.49□□□□□ -0.89
VPS52-220ENST00000493674 LCN12Q6JVE5 192 aa9.49□□□□□ -0.89
VPS52-220ENST00000493674 TMEM75Q8N9X5 138 aa9.49□□□□□ -0.89
VPS52-220ENST00000493674 CMTM2Q8TAZ6 248 aa9.49□□□□□ -0.89
VPS52-220ENST00000493674 C16orf92Q96LL3 132 aa9.49□□□□□ -0.89
VPS52-220ENST00000493674 SDF2L1Q9HCN8 221 aa9.49□□□□□ -0.89
VPS52-220ENST00000493674 NAT8Q9UHE5 227 aa9.49□□□□□ -0.89
VPS52-220ENST00000493674 SELENOKQ9Y6D0 94 aa9.49□□□□□ -0.89
VPS52-220ENST00000493674 LY96Q9Y6Y9 160 aa9.49□□□□□ -0.89
VPS52-220ENST00000493674 PKD1L1Q8TDX9 2849 aa9.49□□□□□ -0.89
VPS52-220ENST00000493674 RBAKDNA6NC62 111 aa9.48□□□□□ -0.89
VPS52-220ENST00000493674 IGLV1-51P01701 117 aa9.48□□□□□ -0.89
VPS52-220ENST00000493674 IGLV2-8P01709 118 aa9.48□□□□□ -0.89
VPS52-220ENST00000493674 APOC3P02656 99 aa9.48□□□□□ -0.89
VPS52-220ENST00000493674 PF4P02776 101 aa9.48□□□□□ -0.89
VPS52-220ENST00000493674 ZNF674Q2M3X9 581 aa9.48□□□□□ -0.89
VPS52-220ENST00000493674 GOLT1AQ6ZVE7 132 aa9.48□□□□□ -0.89
VPS52-220ENST00000493674 Q86TA4 180 aa9.48□□□□□ -0.89
VPS52-220ENST00000493674 FAM24BQ8N5W8 94 aa9.48□□□□□ -0.89
VPS52-220ENST00000493674 DYNLRB2Q8TF09 96 aa9.48□□□□□ -0.89
VPS52-220ENST00000493674 FMC1Q96HJ9 113 aa9.48□□□□□ -0.89
VPS52-220ENST00000493674 LINC00479Q96M42 142 aa9.48□□□□□ -0.89
VPS52-220ENST00000493674 NIPSNAP3BQ9BS92 247 aa9.48□□□□□ -0.89
VPS52-220ENST00000493674 TRAV34A0A0B4J273 112 aa9.47□□□□□ -0.89
VPS52-220ENST00000493674 FBLL1A6NHQ2 334 aaKnown RBP9.47□□□□□ -0.89
VPS52-220ENST00000493674 ZNF705FA8MVS1 300 aaPredicted RBP9.47□□□□□ -0.89
VPS52-220ENST00000493674 PRAC2D3DTV9 90 aa9.47□□□□□ -0.89
VPS52-220ENST00000493674 LTAP01374 205 aa9.47□□□□□ -0.89
VPS52-220ENST00000493674 ID1P41134 155 aa9.47□□□□□ -0.89
VPS52-220ENST00000493674 CSN1S1P47710 185 aa9.47□□□□□ -0.89
VPS52-220ENST00000493674 RPL11P62913 178 aaKnown RBP9.47□□□□□ -0.89
VPS52-220ENST00000493674 PNRC1Q12796 327 aaPredicted RBP9.47□□□□□ -0.89
VPS52-220ENST00000493674 TMEM241Q24JQ0 296 aa9.47□□□□□ -0.89
VPS52-220ENST00000493674 CD300EQ496F6 205 aaPredicted RBP9.47□□□□□ -0.89
VPS52-220ENST00000493674 CENPWQ5EE01 88 aa9.47□□□□□ -0.89
VPS52-220ENST00000493674 SVBPQ8N300 66 aa9.47□□□□□ -0.89
VPS52-220ENST00000493674 OR2K2Q8NGT1 345 aa9.47□□□□□ -0.89
VPS52-220ENST00000493674 TVP23CQ96ET8 276 aa9.47□□□□□ -0.89
VPS52-220ENST00000493674 SMIM12Q96EX1 92 aa9.47□□□□□ -0.89
VPS52-220ENST00000493674 SPAG8Q99932 426 aaPredicted RBP9.47□□□□□ -0.89
VPS52-220ENST00000493674 IGKV3-7A0A075B6H7 116 aa9.46□□□□□ -0.9
VPS52-220ENST00000493674 IGKV2-40A0A087WW87 121 aaPredicted RBP9.46□□□□□ -0.9
VPS52-220ENST00000493674 TRAV8-1A0A0A6YYK1 113 aa9.46□□□□□ -0.9
VPS52-220ENST00000493674 IZUMO1RA6ND01 250 aa9.46□□□□□ -0.9
VPS52-220ENST00000493674 K7EQM0 130 aa9.46□□□□□ -0.9
VPS52-220ENST00000493674 IGKV2D-40P01614 121 aaPredicted RBP9.46□□□□□ -0.9
VPS52-220ENST00000493674 RPL23P62829 140 aaKnown RBP9.46□□□□□ -0.9
VPS52-220ENST00000493674 C9orf47Q6ZRZ4 202 aa9.46□□□□□ -0.9
VPS52-220ENST00000493674 LINC01551Q86U37 167 aa9.46□□□□□ -0.9
VPS52-220ENST00000493674 GBGT1Q8N5D6 347 aa9.46□□□□□ -0.9
VPS52-220ENST00000493674 CLRN3Q8NCR9 226 aa9.46□□□□□ -0.9
VPS52-220ENST00000493674 MLST8Q9BVC4 326 aa9.46□□□□□ -0.9
VPS52-220ENST00000493674 PPP1R14DQ9NXH3 145 aa9.46□□□□□ -0.9
VPS52-220ENST00000493674 RPH3ALQ9UNE2 315 aa9.46□□□□□ -0.9
VPS52-220ENST00000493674 ZNF256Q9Y2P7 627 aaPredicted RBP9.46□□□□□ -0.9
VPS52-220ENST00000493674 FBN3Q75N90 2809 aa9.46□□□□□ -0.9
VPS52-220ENST00000493674 NOTCH3Q9UM47 2321 aa9.45□□□□□ -0.9
VPS52-220ENST00000493674 PGPEP1LA6NFU8 196 aa9.45□□□□□ -0.9
VPS52-220ENST00000493674 NPIPB6E9PJ23 425 aa9.45□□□□□ -0.9
VPS52-220ENST00000493674 SNAPINO95295 136 aa9.45□□□□□ -0.9
VPS52-220ENST00000493674 GNG4P50150 75 aa9.45□□□□□ -0.9
VPS52-220ENST00000493674 UBE2G1P62253 170 aa9.45□□□□□ -0.9
VPS52-220ENST00000493674 PAFAH1B2P68402 229 aa9.45□□□□□ -0.9
VPS52-220ENST00000493674 FLI1Q01543 452 aaPredicted RBP9.45□□□□□ -0.9
VPS52-220ENST00000493674 RBPMS2Q6ZRY4 209 aaKnown RBP9.45□□□□□ -0.9
VPS52-220ENST00000493674 COX8CQ7Z4L0 72 aa9.45□□□□□ -0.9
VPS52-220ENST00000493674 ZNF738Q8NE65 137 aa9.45□□□□□ -0.9
VPS52-220ENST00000493674 WFDC9Q8NEX5 89 aa9.45□□□□□ -0.9
VPS52-220ENST00000493674 OCC1Q8TAD7 63 aa9.45□□□□□ -0.9
VPS52-220ENST00000493674 VGLL1Q99990 258 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms