RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 NMES1Q9C002 83 aa8.16□□□□□ -1.1
LRTM1-202ENST00000493075 SLC39A9Q9NUM3 307 aa8.16□□□□□ -1.1
LRTM1-202ENST00000493075 PTTG2Q9NZH5 202 aa8.16□□□□□ -1.1
LRTM1-202ENST00000493075 TRAV12-2A0A075B6T6 113 aa8.15□□□□□ -1.1
LRTM1-202ENST00000493075 H3BQ15 152 aa8.15□□□□□ -1.1
LRTM1-202ENST00000493075 ZNF253O75346 499 aa8.15□□□□□ -1.1
LRTM1-202ENST00000493075 IFITM3Q01628 133 aa8.15□□□□□ -1.1
LRTM1-202ENST00000493075 BAXQ07812 192 aa8.15□□□□□ -1.1
LRTM1-202ENST00000493075 OR10J6PQ8NGY7 276 aa8.15□□□□□ -1.1
LRTM1-202ENST00000493075 SLC25A31Q9H0C2 315 aa8.15□□□□□ -1.1
LRTM1-202ENST00000493075 TMEM14CQ9P0S9 112 aa8.15□□□□□ -1.1
LRTM1-202ENST00000493075 TRAV5A0A0B4J249 113 aa8.14□□□□□ -1.11
LRTM1-202ENST00000493075 UBE2L5PA0A1B0GUS4 154 aa8.14□□□□□ -1.11
LRTM1-202ENST00000493075 TMEM238LA0A1B0GVL6 79 aa8.14□□□□□ -1.11
LRTM1-202ENST00000493075 PLAC8L1A1L4L8 177 aa8.14□□□□□ -1.11
LRTM1-202ENST00000493075 E5RGE8 158 aa8.14□□□□□ -1.11
LRTM1-202ENST00000493075 INMT-MINDY4F8WBC2 141 aa8.14□□□□□ -1.11
LRTM1-202ENST00000493075 SLC17A3O00476 420 aa8.14□□□□□ -1.11
LRTM1-202ENST00000493075 SNRPCP09234 159 aaKnown RBP8.14□□□□□ -1.11
LRTM1-202ENST00000493075 AZU1P20160 251 aa8.14□□□□□ -1.11
LRTM1-202ENST00000493075 ZNF493Q6ZR52 646 aa8.14□□□□□ -1.11
LRTM1-202ENST00000493075 MARVELD1Q9BSK0 173 aa8.14□□□□□ -1.11
LRTM1-202ENST00000493075 PRAC2D3DTV9 90 aa8.13□□□□□ -1.11
LRTM1-202ENST00000493075 H7BYZ3 331 aa8.13□□□□□ -1.11
LRTM1-202ENST00000493075 PRM2P04554 102 aa8.13□□□□□ -1.11
LRTM1-202ENST00000493075 HIST1H1EP10412 219 aaKnown RBP8.13□□□□□ -1.11
LRTM1-202ENST00000493075 FGF7P21781 194 aa8.13□□□□□ -1.11
LRTM1-202ENST00000493075 NHLH2Q02577 135 aa8.13□□□□□ -1.11
LRTM1-202ENST00000493075 RNF212Q495C1 297 aa8.13□□□□□ -1.11
LRTM1-202ENST00000493075 MRPL53Q96EL3 112 aaKnown RBP8.13□□□□□ -1.11
LRTM1-202ENST00000493075 ODF3Q96PU9 254 aa8.13□□□□□ -1.11
LRTM1-202ENST00000493075 NPCDR1Q9BY65 106 aa8.13□□□□□ -1.11
LRTM1-202ENST00000493075 ZNF586Q9NXT0 402 aa8.13□□□□□ -1.11
LRTM1-202ENST00000493075 DNAH10Q8IVF4 4471 aa8.12□□□□□ -1.11
LRTM1-202ENST00000493075 TRBV19A0A075B6N1 114 aa8.12□□□□□ -1.11
LRTM1-202ENST00000493075 CBY3A6NI87 242 aa8.12□□□□□ -1.11
LRTM1-202ENST00000493075 H3BTX0 84 aa8.12□□□□□ -1.11
LRTM1-202ENST00000493075 SIX6O95475 246 aa8.12□□□□□ -1.11
LRTM1-202ENST00000493075 HTN3P15516 51 aa8.12□□□□□ -1.11
LRTM1-202ENST00000493075 PDE6HQ13956 83 aa8.12□□□□□ -1.11
LRTM1-202ENST00000493075 C15orf53Q8NAA6 179 aa8.12□□□□□ -1.11
LRTM1-202ENST00000493075 OR5C1Q8NGR4 320 aa8.12□□□□□ -1.11
LRTM1-202ENST00000493075 C16orf74Q96GX8 76 aa8.12□□□□□ -1.11
LRTM1-202ENST00000493075 PGPEP1Q9NXJ5 209 aa8.12□□□□□ -1.11
LRTM1-202ENST00000493075 PRELID1Q9Y255 219 aa8.12□□□□□ -1.11
LRTM1-202ENST00000493075 TIMM8BQ9Y5J9 83 aaPredicted RBP8.12□□□□□ -1.11
LRTM1-202ENST00000493075 DNAH6Q9C0G6 4158 aa8.11□□□□□ -1.11
LRTM1-202ENST00000493075 NPIPB6E9PJ23 425 aa8.11□□□□□ -1.11
LRTM1-202ENST00000493075 H0YIZ8 118 aa8.11□□□□□ -1.11
LRTM1-202ENST00000493075 CT45A10P0DMU9 189 aa8.11□□□□□ -1.11
LRTM1-202ENST00000493075 DEFB130BP0DP73 79 aa8.11□□□□□ -1.11
LRTM1-202ENST00000493075 DEFB130AP0DP74 79 aa8.11□□□□□ -1.11
LRTM1-202ENST00000493075 SMCPP49901 116 aaPredicted RBP8.11□□□□□ -1.11
LRTM1-202ENST00000493075 DEFA1P59665 94 aa8.11□□□□□ -1.11
LRTM1-202ENST00000493075 DEFA3P59666 94 aa8.11□□□□□ -1.11
LRTM1-202ENST00000493075 LGALS9BQ3B8N2 356 aa8.11□□□□□ -1.11
LRTM1-202ENST00000493075 TMEM88Q6PEY1 159 aa8.11□□□□□ -1.11
LRTM1-202ENST00000493075 LINC00336Q6ZUF6 198 aa8.11□□□□□ -1.11
LRTM1-202ENST00000493075 RNASE8Q8TDE3 154 aaKnown RBP8.11□□□□□ -1.11
LRTM1-202ENST00000493075 TMEM263Q8WUH6 116 aaKnown RBP8.11□□□□□ -1.11
LRTM1-202ENST00000493075 OR5AC2Q9NZP5 309 aa8.11□□□□□ -1.11
LRTM1-202ENST00000493075 NDUFB4O95168 129 aa8.1□□□□□ -1.11
LRTM1-202ENST00000493075 ATP5G1P05496 136 aa8.1□□□□□ -1.11
LRTM1-202ENST00000493075 PRB4P10163 310 aaPredicted RBP8.1□□□□□ -1.11
LRTM1-202ENST00000493075 HTN1P15515 57 aa8.1□□□□□ -1.11
LRTM1-202ENST00000493075 LEPP41159 167 aa8.1□□□□□ -1.11
LRTM1-202ENST00000493075 ATP5G3P48201 142 aa8.1□□□□□ -1.11
LRTM1-202ENST00000493075 H2BFSP57053 126 aa8.1□□□□□ -1.11
LRTM1-202ENST00000493075 FAM3BP58499 235 aaPredicted RBP8.1□□□□□ -1.11
LRTM1-202ENST00000493075 KIR3DS1Q14943 382 aa8.1□□□□□ -1.11
LRTM1-202ENST00000493075 GFI1BQ5VTD9 330 aa8.1□□□□□ -1.11
LRTM1-202ENST00000493075 CCDC28AQ8IWP9 274 aa8.1□□□□□ -1.11
LRTM1-202ENST00000493075 LINC00477Q96M19 166 aa8.1□□□□□ -1.11
LRTM1-202ENST00000493075 WDR61Q9GZS3 305 aaKnown RBP8.1□□□□□ -1.11
LRTM1-202ENST00000493075 BATF3Q9NR55 127 aa8.1□□□□□ -1.11
LRTM1-202ENST00000493075 KCNIP2Q9NS61 270 aa8.1□□□□□ -1.11
LRTM1-202ENST00000493075 TIMM9Q9Y5J7 89 aa8.1□□□□□ -1.11
LRTM1-202ENST00000493075 FRAS1Q86XX4 4008 aa8.1□□□□□ -1.11
LRTM1-202ENST00000493075 FCN2Q15485 313 aa8.09□□□□□ -1.11
LRTM1-202ENST00000493075 LRRC37A5PQ49AS3 106 aa8.09□□□□□ -1.11
LRTM1-202ENST00000493075 GCSAMLQ5JQS6 135 aa8.09□□□□□ -1.11
LRTM1-202ENST00000493075 UBE2DNLQ8IWF7 75 aa8.09□□□□□ -1.11
LRTM1-202ENST00000493075 THAP6Q8TBB0 222 aa8.09□□□□□ -1.11
LRTM1-202ENST00000493075 PPP1R1CQ8WVI7 109 aa8.09□□□□□ -1.11
LRTM1-202ENST00000493075 FAM167A-AS1Q96KT0 104 aa8.09□□□□□ -1.11
LRTM1-202ENST00000493075 C17orf112F2Z3M2 114 aa8.08□□□□□ -1.12
LRTM1-202ENST00000493075 SLC25A5P05141 298 aaKnown RBP8.08□□□□□ -1.12
LRTM1-202ENST00000493075 NMBP08949 121 aa8.08□□□□□ -1.12
LRTM1-202ENST00000493075 NBEAP1P0C6P0 100 aa8.08□□□□□ -1.12
LRTM1-202ENST00000493075 PET100P0DJ07 73 aa8.08□□□□□ -1.12
LRTM1-202ENST00000493075 CLINT1Q14677 625 aa8.08□□□□□ -1.12
LRTM1-202ENST00000493075 LINC00612Q8N6U2 182 aa8.08□□□□□ -1.12
LRTM1-202ENST00000493075 FAM19A4Q96LR4 140 aa8.08□□□□□ -1.12
LRTM1-202ENST00000493075 PYGO2Q9BRQ0 406 aa8.08□□□□□ -1.12
LRTM1-202ENST00000493075 SLC25A2Q9BXI2 301 aa8.08□□□□□ -1.12
LRTM1-202ENST00000493075 MRPL32Q9BYC8 188 aaKnown RBP8.08□□□□□ -1.12
LRTM1-202ENST00000493075 PARD6GQ9BYG4 376 aaPredicted RBP8.08□□□□□ -1.12
LRTM1-202ENST00000493075 OR51M1Q9H341 326 aa8.08□□□□□ -1.12
LRTM1-202ENST00000493075 AAMDCQ9H7C9 122 aa8.08□□□□□ -1.12
LRTM1-202ENST00000493075 NOP10Q9NPE3 64 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms