RNA–Protein interactions for RNA: ENST00000492423.5

COPS7B-222, Transcript of COP9 signalosome subunit 7B, human

TSL 2

Gene COPS7B, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS7B-222	ENST00000492423	TCRA	P04437	139 aa		11.19	□□□□□ -0.62
COPS7B-222	ENST00000492423	PRB4	P10163	310 aa	Predicted RBP	11.19	□□□□□ -0.62
COPS7B-222	ENST00000492423	RPL11	P62913	178 aa	Known RBP	11.19	□□□□□ -0.62
COPS7B-222	ENST00000492423	C12orf54	Q6X4T0	127 aa		11.19	□□□□□ -0.62
COPS7B-222	ENST00000492423	TMEM61	Q8N0U2	210 aa		11.19	□□□□□ -0.62
COPS7B-222	ENST00000492423	RNF182	Q8N6D2	247 aa		11.19	□□□□□ -0.62
COPS7B-222	ENST00000492423	RPUSD4	Q96CM3	377 aa	Known RBP	11.19	□□□□□ -0.62
COPS7B-222	ENST00000492423	C20orf173	Q96LM9	149 aa		11.19	□□□□□ -0.62
COPS7B-222	ENST00000492423	SEC11C	Q9BY50	192 aa		11.19	□□□□□ -0.62
COPS7B-222	ENST00000492423	MS4A6A	Q9H2W1	248 aa		11.19	□□□□□ -0.62
COPS7B-222	ENST00000492423	RPH3AL	Q9UNE2	315 aa		11.19	□□□□□ -0.62
COPS7B-222	ENST00000492423	CARHSP1	Q9Y2V2	147 aa	Known RBP	11.19	□□□□□ -0.62
COPS7B-222	ENST00000492423		K7EQG2	157 aa		11.18	□□□□□ -0.62
COPS7B-222	ENST00000492423	AKR1C3	P42330	323 aa		11.18	□□□□□ -0.62
COPS7B-222	ENST00000492423	SOHLH1	Q5JUK2	328 aa		11.18	□□□□□ -0.62
COPS7B-222	ENST00000492423	GBGT1	Q8N5D6	347 aa		11.18	□□□□□ -0.62
COPS7B-222	ENST00000492423	HIST1H2BA	Q96A08	127 aa		11.18	□□□□□ -0.62
COPS7B-222	ENST00000492423	MRPL53	Q96EL3	112 aa	Known RBP	11.18	□□□□□ -0.62
COPS7B-222	ENST00000492423	C16orf92	Q96LL3	132 aa		11.18	□□□□□ -0.62
COPS7B-222	ENST00000492423	ATG101	Q9BSB4	218 aa		11.18	□□□□□ -0.62
COPS7B-222	ENST00000492423	PRELID1	Q9Y255	219 aa		11.18	□□□□□ -0.62
COPS7B-222	ENST00000492423	DIRC3	C9JPN6	131 aa		11.17	□□□□□ -0.62
COPS7B-222	ENST00000492423	PSG3	Q16557	428 aa		11.17	□□□□□ -0.62
COPS7B-222	ENST00000492423	CD300E	Q496F6	205 aa	Predicted RBP	11.17	□□□□□ -0.62
COPS7B-222	ENST00000492423	FAM24B	Q8N5W8	94 aa		11.17	□□□□□ -0.62
COPS7B-222	ENST00000492423	ARL6IP6	Q8N6S5	226 aa		11.17	□□□□□ -0.62
COPS7B-222	ENST00000492423	C3orf56	Q8N813	242 aa		11.17	□□□□□ -0.62
COPS7B-222	ENST00000492423	CMTM2	Q8TAZ6	248 aa		11.17	□□□□□ -0.62
COPS7B-222	ENST00000492423	TRBV20OR9-2	A0A075B6H5	130 aa		11.16	□□□□□ -0.62
COPS7B-222	ENST00000492423	TRAV2	A0A0B4J234	112 aa		11.16	□□□□□ -0.62
COPS7B-222	ENST00000492423	ZNF705F	A8MVS1	300 aa	Predicted RBP	11.16	□□□□□ -0.62
COPS7B-222	ENST00000492423	PRAC2	D3DTV9	90 aa		11.16	□□□□□ -0.62
COPS7B-222	ENST00000492423	ISLR	O14498	428 aa		11.16	□□□□□ -0.62
COPS7B-222	ENST00000492423	TSPAN4	O14817	238 aa		11.16	□□□□□ -0.62
COPS7B-222	ENST00000492423	SAP30	O75446	220 aa		11.16	□□□□□ -0.62
COPS7B-222	ENST00000492423	S100A1	P23297	94 aa		11.16	□□□□□ -0.62
COPS7B-222	ENST00000492423	TFPI2	P48307	235 aa		11.16	□□□□□ -0.62
COPS7B-222	ENST00000492423	ZNF674	Q2M3X9	581 aa		11.16	□□□□□ -0.62
COPS7B-222	ENST00000492423	C4orf48	Q5BLP8	95 aa		11.16	□□□□□ -0.62
COPS7B-222	ENST00000492423	SHISA2	Q6UWI4	295 aa		11.16	□□□□□ -0.62
COPS7B-222	ENST00000492423	WFDC3	Q8IUB2	231 aa		11.16	□□□□□ -0.62
COPS7B-222	ENST00000492423	IGF2BP2-AS1	Q96M15	143 aa		11.16	□□□□□ -0.62
COPS7B-222	ENST00000492423	LINC00479	Q96M42	142 aa		11.16	□□□□□ -0.62
COPS7B-222	ENST00000492423	SMIM7	Q9BQ49	75 aa		11.16	□□□□□ -0.62
COPS7B-222	ENST00000492423	CLEC5A	Q9NY25	188 aa		11.16	□□□□□ -0.62
COPS7B-222	ENST00000492423	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	11.15	□□□□□ -0.62
COPS7B-222	ENST00000492423	TRAV34	A0A0B4J273	112 aa		11.15	□□□□□ -0.62
COPS7B-222	ENST00000492423	TRAV25	A0A0B4J276	109 aa		11.15	□□□□□ -0.62
COPS7B-222	ENST00000492423	IZUMO1R	A6ND01	250 aa		11.15	□□□□□ -0.62
COPS7B-222	ENST00000492423	ZNF727	A8MUV8	499 aa		11.15	□□□□□ -0.62
COPS7B-222	ENST00000492423	IGKV2D-40	P01614	121 aa	Predicted RBP	11.15	□□□□□ -0.62
COPS7B-222	ENST00000492423	IGLV1-51	P01701	117 aa		11.15	□□□□□ -0.62
COPS7B-222	ENST00000492423	IGLV2-11	P01706	119 aa		11.15	□□□□□ -0.62
COPS7B-222	ENST00000492423	RPL35	P42766	123 aa	Known RBP	11.15	□□□□□ -0.62
COPS7B-222	ENST00000492423	CNN1	P51911	297 aa	Known RBP	11.15	□□□□□ -0.62
COPS7B-222	ENST00000492423	GUCA2B	Q16661	112 aa		11.15	□□□□□ -0.62
COPS7B-222	ENST00000492423	TMEM183B	Q1AE95	376 aa		11.15	□□□□□ -0.62
COPS7B-222	ENST00000492423	SAMD13	Q5VXD3	122 aa		11.15	□□□□□ -0.62
COPS7B-222	ENST00000492423	LCN12	Q6JVE5	192 aa		11.15	□□□□□ -0.62
COPS7B-222	ENST00000492423	GOLT1A	Q6ZVE7	132 aa		11.15	□□□□□ -0.62
COPS7B-222	ENST00000492423	KLF12	Q9Y4X4	402 aa		11.15	□□□□□ -0.62
COPS7B-222	ENST00000492423	DNASE2	O00115	360 aa	Predicted RBP	11.14	□□□□□ -0.63
COPS7B-222	ENST00000492423	CSN1S1	P47710	185 aa		11.14	□□□□□ -0.63
COPS7B-222	ENST00000492423	FAM74A3	Q4VXF1	159 aa		11.14	□□□□□ -0.63
COPS7B-222	ENST00000492423	RBPMS2	Q6ZRY4	209 aa	Known RBP	11.14	□□□□□ -0.63
COPS7B-222	ENST00000492423	TMEM75	Q8N9X5	138 aa		11.14	□□□□□ -0.63
COPS7B-222	ENST00000492423	TRAV8-1	A0A0A6YYK1	113 aa		11.13	□□□□□ -0.63
COPS7B-222	ENST00000492423	TRBV6-1	A0A0K0K1D8	114 aa		11.13	□□□□□ -0.63
COPS7B-222	ENST00000492423	SERTM2	A0A1B0GWG4	89 aa		11.13	□□□□□ -0.63
COPS7B-222	ENST00000492423		C9JCJ5	164 aa		11.13	□□□□□ -0.63
COPS7B-222	ENST00000492423	APOC3	P02656	99 aa		11.13	□□□□□ -0.63
COPS7B-222	ENST00000492423	ID1	P41134	155 aa		11.13	□□□□□ -0.63
COPS7B-222	ENST00000492423	TAS2R60	P59551	318 aa		11.13	□□□□□ -0.63
COPS7B-222	ENST00000492423	DEFB1	P60022	68 aa		11.13	□□□□□ -0.63
COPS7B-222	ENST00000492423	CENPW	Q5EE01	88 aa		11.13	□□□□□ -0.63
COPS7B-222	ENST00000492423		Q86TA4	180 aa		11.13	□□□□□ -0.63
COPS7B-222	ENST00000492423	ZNF738	Q8NE65	137 aa		11.13	□□□□□ -0.63
COPS7B-222	ENST00000492423	OR2K2	Q8NGT1	345 aa		11.13	□□□□□ -0.63
COPS7B-222	ENST00000492423	SGK494	Q96LW2	274 aa		11.13	□□□□□ -0.63
COPS7B-222	ENST00000492423	SPAG8	Q99932	426 aa	Predicted RBP	11.13	□□□□□ -0.63
COPS7B-222	ENST00000492423	SDF2L1	Q9HCN8	221 aa		11.13	□□□□□ -0.63
COPS7B-222	ENST00000492423	PGPEP1L	A6NFU8	196 aa		11.12	□□□□□ -0.63
COPS7B-222	ENST00000492423	IGLV2-8	P01709	118 aa		11.12	□□□□□ -0.63
COPS7B-222	ENST00000492423	ZNF688	P0C7X2	276 aa		11.12	□□□□□ -0.63
COPS7B-222	ENST00000492423	UBE2G1	P62253	170 aa		11.12	□□□□□ -0.63
COPS7B-222	ENST00000492423	PAFAH1B2	P68402	229 aa		11.12	□□□□□ -0.63
COPS7B-222	ENST00000492423	FMC1	Q96HJ9	113 aa		11.12	□□□□□ -0.63
COPS7B-222	ENST00000492423	VGLL1	Q99990	258 aa		11.12	□□□□□ -0.63
COPS7B-222	ENST00000492423	NIPSNAP3B	Q9BS92	247 aa		11.12	□□□□□ -0.63
COPS7B-222	ENST00000492423	NAT8	Q9UHE5	227 aa		11.12	□□□□□ -0.63
COPS7B-222	ENST00000492423	ZNF256	Q9Y2P7	627 aa	Predicted RBP	11.12	□□□□□ -0.63
COPS7B-222	ENST00000492423	RBAKDN	A6NC62	111 aa		11.11	□□□□□ -0.63
COPS7B-222	ENST00000492423	S100A9	P06702	114 aa	Known RBP	11.11	□□□□□ -0.63
COPS7B-222	ENST00000492423	RPL23	P62829	140 aa	Known RBP	11.11	□□□□□ -0.63
COPS7B-222	ENST00000492423	FLI1	Q01543	452 aa	Predicted RBP	11.11	□□□□□ -0.63
COPS7B-222	ENST00000492423	TMEM241	Q24JQ0	296 aa		11.11	□□□□□ -0.63
COPS7B-222	ENST00000492423	WFDC9	Q8NEX5	89 aa		11.11	□□□□□ -0.63
COPS7B-222	ENST00000492423	TVP23C	Q96ET8	276 aa		11.11	□□□□□ -0.63
COPS7B-222	ENST00000492423	PSG8	Q9UQ74	426 aa		11.11	□□□□□ -0.63
COPS7B-222	ENST00000492423	LY96	Q9Y6Y9	160 aa		11.11	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms