RNA–Protein interactions for RNA: ENST00000490132.1

COL9A2-209, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-209ENST00000490132 CDKN1BP46527 198 aa12.96□□□□□ -0.33
COL9A2-209ENST00000490132 ATP6V1FQ16864 119 aa12.96□□□□□ -0.33
COL9A2-209ENST00000490132 TMEM256Q8N2U0 113 aa12.96□□□□□ -0.33
COL9A2-209ENST00000490132 LINC01587Q99440 93 aa12.96□□□□□ -0.33
COL9A2-209ENST00000490132 ZNF586Q9NXT0 402 aa12.96□□□□□ -0.33
COL9A2-209ENST00000490132 OR5AC2Q9NZP5 309 aa12.96□□□□□ -0.33
COL9A2-209ENST00000490132 LYRM9A8MSI8 78 aa12.95□□□□□ -0.34
COL9A2-209ENST00000490132 H0YIZ8 118 aa12.95□□□□□ -0.34
COL9A2-209ENST00000490132 NHLH2Q02577 135 aa12.95□□□□□ -0.34
COL9A2-209ENST00000490132 FCN2Q15485 313 aa12.95□□□□□ -0.34
COL9A2-209ENST00000490132 GCSAMLQ5JQS6 135 aa12.95□□□□□ -0.34
COL9A2-209ENST00000490132 TMEM88Q6PEY1 159 aa12.95□□□□□ -0.34
COL9A2-209ENST00000490132 INMT-MINDY4F8WBC2 141 aa12.94□□□□□ -0.34
COL9A2-209ENST00000490132 TAS2R60P59551 318 aa12.94□□□□□ -0.34
COL9A2-209ENST00000490132 GUK1Q16774 197 aa12.94□□□□□ -0.34
COL9A2-209ENST00000490132 LRRC37A5PQ49AS3 106 aa12.94□□□□□ -0.34
COL9A2-209ENST00000490132 OR10J6PQ8NGY7 276 aa12.94□□□□□ -0.34
COL9A2-209ENST00000490132 NPCDR1Q9BY65 106 aa12.94□□□□□ -0.34
COL9A2-209ENST00000490132 NMES1Q9C002 83 aa12.94□□□□□ -0.34
COL9A2-209ENST00000490132 PRAF2O60831 178 aa12.93□□□□□ -0.34
COL9A2-209ENST00000490132 DEFB130BP0DP73 79 aa12.93□□□□□ -0.34
COL9A2-209ENST00000490132 DEFB130AP0DP74 79 aa12.93□□□□□ -0.34
COL9A2-209ENST00000490132 HTN1P15515 57 aa12.93□□□□□ -0.34
COL9A2-209ENST00000490132 OR5C1Q8NGR4 320 aa12.93□□□□□ -0.34
COL9A2-209ENST00000490132 THAP6Q8TBB0 222 aa12.93□□□□□ -0.34
COL9A2-209ENST00000490132 TRBV19A0A075B6N1 114 aa12.92□□□□□ -0.34
COL9A2-209ENST00000490132 E5RGE8 158 aa12.92□□□□□ -0.34
COL9A2-209ENST00000490132 ZNF253O75346 499 aa12.92□□□□□ -0.34
COL9A2-209ENST00000490132 MPDU1O75352 247 aa12.92□□□□□ -0.34
COL9A2-209ENST00000490132 PYYP10082 97 aa12.92□□□□□ -0.34
COL9A2-209ENST00000490132 GFI1BQ5VTD9 330 aa12.92□□□□□ -0.34
COL9A2-209ENST00000490132 RNASE8Q8TDE3 154 aaKnown RBP12.92□□□□□ -0.34
COL9A2-209ENST00000490132 C16orf74Q96GX8 76 aa12.92□□□□□ -0.34
COL9A2-209ENST00000490132 TMEM14CQ9P0S9 112 aa12.92□□□□□ -0.34
COL9A2-209ENST00000490132 NPIPB6E9PJ23 425 aa12.91□□□□□ -0.34
COL9A2-209ENST00000490132 M0R3E3 92 aa12.91□□□□□ -0.34
COL9A2-209ENST00000490132 NDUFB4O95168 129 aa12.91□□□□□ -0.34
COL9A2-209ENST00000490132 CT45A10P0DMU9 189 aa12.91□□□□□ -0.34
COL9A2-209ENST00000490132 H2BFSP57053 126 aa12.91□□□□□ -0.34
COL9A2-209ENST00000490132 CLINT1Q14677 625 aa12.91□□□□□ -0.34
COL9A2-209ENST00000490132 UBE2DNLQ8IWF7 75 aa12.91□□□□□ -0.34
COL9A2-209ENST00000490132 C20orf144Q9BQM9 153 aa12.91□□□□□ -0.34
COL9A2-209ENST00000490132 MARVELD1Q9BSK0 173 aa12.91□□□□□ -0.34
COL9A2-209ENST00000490132 SLC25A31Q9H0C2 315 aa12.91□□□□□ -0.34
COL9A2-209ENST00000490132 H7BYZ3 331 aa12.9□□□□□ -0.34
COL9A2-209ENST00000490132 M0R2N4 97 aa12.9□□□□□ -0.34
COL9A2-209ENST00000490132 RLN2P04090 185 aa12.9□□□□□ -0.34
COL9A2-209ENST00000490132 TMEM263Q8WUH6 116 aaKnown RBP12.9□□□□□ -0.34
COL9A2-209ENST00000490132 MRPL53Q96EL3 112 aaKnown RBP12.9□□□□□ -0.34
COL9A2-209ENST00000490132 ODF3Q96PU9 254 aa12.9□□□□□ -0.34
COL9A2-209ENST00000490132 SLC25A2Q9BXI2 301 aa12.9□□□□□ -0.34
COL9A2-209ENST00000490132 J3KRW8 73 aa12.89□□□□□ -0.35
COL9A2-209ENST00000490132 HIST1H1EP10412 219 aaKnown RBP12.89□□□□□ -0.35
COL9A2-209ENST00000490132 MIR17HGQ75NE6 70 aa12.89□□□□□ -0.35
COL9A2-209ENST00000490132 FAM167A-AS1Q96KT0 104 aa12.89□□□□□ -0.35
COL9A2-209ENST00000490132 WDR61Q9GZS3 305 aaKnown RBP12.89□□□□□ -0.35
COL9A2-209ENST00000490132 TIMM8BQ9Y5J9 83 aaPredicted RBP12.89□□□□□ -0.35
COL9A2-209ENST00000490132 HERC2O95714 4834 aa12.88□□□□□ -0.35
COL9A2-209ENST00000490132 IGLV2-18A0A075B6J9 118 aa12.88□□□□□ -0.35
COL9A2-209ENST00000490132 LEPP41159 167 aa12.88□□□□□ -0.35
COL9A2-209ENST00000490132 CYCSP99999 105 aaKnown RBP12.88□□□□□ -0.35
COL9A2-209ENST00000490132 ZNF493Q6ZR52 646 aa12.88□□□□□ -0.35
COL9A2-209ENST00000490132 C15orf53Q8NAA6 179 aa12.88□□□□□ -0.35
COL9A2-209ENST00000490132 BLNKQ8WV28 456 aa12.88□□□□□ -0.35
COL9A2-209ENST00000490132 PPP1R1CQ8WVI7 109 aa12.88□□□□□ -0.35
COL9A2-209ENST00000490132 NOP10Q9NPE3 64 aaKnown RBP12.88□□□□□ -0.35
COL9A2-209ENST00000490132 F5H768 121 aa12.87□□□□□ -0.35
COL9A2-209ENST00000490132 RTL8CO15255 209 aa12.87□□□□□ -0.35
COL9A2-209ENST00000490132 ERCC8Q13216 396 aa12.87□□□□□ -0.35
COL9A2-209ENST00000490132 PDE6HQ13956 83 aa12.87□□□□□ -0.35
COL9A2-209ENST00000490132 LGALS9BQ3B8N2 356 aa12.87□□□□□ -0.35
COL9A2-209ENST00000490132 RNF212Q495C1 297 aa12.87□□□□□ -0.35
COL9A2-209ENST00000490132 EXOC3-AS1Q8N2X6 119 aa12.87□□□□□ -0.35
COL9A2-209ENST00000490132 TIMM9Q9Y5J7 89 aa12.87□□□□□ -0.35
COL9A2-209ENST00000490132 TRAV12-3A0A0B4J271 114 aa12.86□□□□□ -0.35
COL9A2-209ENST00000490132 CBY3A6NI87 242 aa12.86□□□□□ -0.35
COL9A2-209ENST00000490132 ATP5G1P05496 136 aa12.86□□□□□ -0.35
COL9A2-209ENST00000490132 ATP5G3P48201 142 aa12.86□□□□□ -0.35
COL9A2-209ENST00000490132 Q6ZR54 194 aa12.86□□□□□ -0.35
COL9A2-209ENST00000490132 LINC00336Q6ZUF6 198 aa12.86□□□□□ -0.35
COL9A2-209ENST00000490132 PRELID1Q9Y255 219 aa12.86□□□□□ -0.35
COL9A2-209ENST00000490132 SSNA1O43805 119 aa12.85□□□□□ -0.35
COL9A2-209ENST00000490132 MPC2O95563 127 aa12.85□□□□□ -0.35
COL9A2-209ENST00000490132 DEFA1P59665 94 aa12.85□□□□□ -0.35
COL9A2-209ENST00000490132 DEFA3P59666 94 aa12.85□□□□□ -0.35
COL9A2-209ENST00000490132 LINC00612Q8N6U2 182 aa12.85□□□□□ -0.35
COL9A2-209ENST00000490132 AGPAT4-IT1Q9H0P7 198 aa12.85□□□□□ -0.35
COL9A2-209ENST00000490132 DYNC1H1Q14204 4646 aaKnown RBP12.84□□□□□ -0.35
COL9A2-209ENST00000490132 A0A1B0GVY2 172 aa12.84□□□□□ -0.35
COL9A2-209ENST00000490132 ICAM4Q14773 271 aa12.84□□□□□ -0.35
COL9A2-209ENST00000490132 FAM19A4Q96LR4 140 aa12.84□□□□□ -0.35
COL9A2-209ENST00000490132 ATP5SQ99766 215 aa12.84□□□□□ -0.35
COL9A2-209ENST00000490132 KCNIP2Q9NS61 270 aa12.84□□□□□ -0.35
COL9A2-209ENST00000490132 HSPB11Q9Y547 144 aa12.84□□□□□ -0.35
COL9A2-209ENST00000490132 KIAA1109Q2LD37 5005 aa12.84□□□□□ -0.35
COL9A2-209ENST00000490132 PKHD1P08F94 4074 aa12.83□□□□□ -0.35
COL9A2-209ENST00000490132 IGKV2-40A0A087WW87 121 aaPredicted RBP12.83□□□□□ -0.36
COL9A2-209ENST00000490132 KLLNB2CW77 178 aa12.83□□□□□ -0.36
COL9A2-209ENST00000490132 IGKV2D-40P01614 121 aaPredicted RBP12.83□□□□□ -0.36
COL9A2-209ENST00000490132 CCDC28AQ8IWP9 274 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 6.1 ms