RNA–Protein interactions for RNA: ENST00000489475.5

HOXB3-210, Transcript of homeobox B3, humanhuman

TSL 2 BASIC

Gene HOXB3, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-210ENST00000489475 ISOC2Q96AB3 205 aa20.36■□□□□ 0.85
HOXB3-210ENST00000489475 BAGE2Q86Y30 109 aa20.35■□□□□ 0.85
HOXB3-210ENST00000489475 SGK494Q96LW2 274 aa20.35■□□□□ 0.85
HOXB3-210ENST00000489475 SERTM2A0A1B0GWG4 89 aa20.34■□□□□ 0.85
HOXB3-210ENST00000489475 C2orf70A6NJV1 201 aa20.34■□□□□ 0.85
HOXB3-210ENST00000489475 TCF24Q7RTU0 167 aa20.34■□□□□ 0.85
HOXB3-210ENST00000489475 SREK1IP1Q8N9Q2 155 aaPredicted RBP20.34■□□□□ 0.85
HOXB3-210ENST00000489475 NRN1Q9NPD7 142 aa20.34■□□□□ 0.85
HOXB3-210ENST00000489475 CBLN1P23435 193 aa20.34■□□□□ 0.85
HOXB3-210ENST00000489475 HLA-DMBP28068 263 aa20.34■□□□□ 0.85
HOXB3-210ENST00000489475 RAX2Q96IS3 184 aa20.34■□□□□ 0.85
HOXB3-210ENST00000489475 C16orf92Q96LL3 132 aa20.34■□□□□ 0.85
HOXB3-210ENST00000489475 CTDSP1Q9GZU7 261 aa20.34■□□□□ 0.85
HOXB3-210ENST00000489475 A0A1B0GUS0 222 aa20.33■□□□□ 0.85
HOXB3-210ENST00000489475 K7EN84 100 aa20.33■□□□□ 0.85
HOXB3-210ENST00000489475 M0QZ24 198 aa20.33■□□□□ 0.85
HOXB3-210ENST00000489475 LCN12Q6JVE5 192 aa20.33■□□□□ 0.85
HOXB3-210ENST00000489475 CLEC5AQ9NY25 188 aa20.33■□□□□ 0.85
HOXB3-210ENST00000489475 PEMTQ9UBM1 199 aa20.33■□□□□ 0.85
HOXB3-210ENST00000489475 C2CD3Q4AC94 2353 aa20.33■□□□□ 0.84
HOXB3-210ENST00000489475 RNF182Q8N6D2 247 aa20.32■□□□□ 0.84
HOXB3-210ENST00000489475 TMEM75Q8N9X5 138 aa20.32■□□□□ 0.84
HOXB3-210ENST00000489475 TMEM242Q9NWH2 141 aa20.32■□□□□ 0.84
HOXB3-210ENST00000489475 TRAV8-1A0A0A6YYK1 113 aa20.32■□□□□ 0.84
HOXB3-210ENST00000489475 TRAV8-2A0A0B4J237 113 aa20.32■□□□□ 0.84
HOXB3-210ENST00000489475 CCL24O00175 119 aa20.32■□□□□ 0.84
HOXB3-210ENST00000489475 IGLV2-8P01709 118 aa20.32■□□□□ 0.84
HOXB3-210ENST00000489475 DLX4Q92988 240 aaPredicted RBP20.32■□□□□ 0.84
HOXB3-210ENST00000489475 MGST1P10620 155 aaKnown RBP20.31■□□□□ 0.84
HOXB3-210ENST00000489475 FOLR2P14207 255 aa20.31■□□□□ 0.84
HOXB3-210ENST00000489475 NHLRC2Q8NBF2 726 aa20.31■□□□□ 0.84
HOXB3-210ENST00000489475 OR9G4Q8NGQ1 327 aa20.31■□□□□ 0.84
HOXB3-210ENST00000489475 ANAPC16Q96DE5 110 aa20.31■□□□□ 0.84
HOXB3-210ENST00000489475 SFRP2Q96HF1 295 aa20.31■□□□□ 0.84
HOXB3-210ENST00000489475 TUBA4BQ9H853 241 aa20.31■□□□□ 0.84
HOXB3-210ENST00000489475 IGKV3-7A0A075B6H7 116 aa20.3■□□□□ 0.84
HOXB3-210ENST00000489475 ZNF705FA8MVS1 300 aaPredicted RBP20.3■□□□□ 0.84
HOXB3-210ENST00000489475 LTAP01374 205 aa20.3■□□□□ 0.84
HOXB3-210ENST00000489475 IGLV2-11P01706 119 aa20.3■□□□□ 0.84
HOXB3-210ENST00000489475 FHL3Q13643 280 aa20.3■□□□□ 0.84
HOXB3-210ENST00000489475 PSG3Q16557 428 aa20.3■□□□□ 0.84
HOXB3-210ENST00000489475 SMIM12Q96EX1 92 aa20.3■□□□□ 0.84
HOXB3-210ENST00000489475 SELENOKQ9Y6D0 94 aa20.3■□□□□ 0.84
HOXB3-210ENST00000489475 TRBV6-1A0A0K0K1D8 114 aa20.3■□□□□ 0.84
HOXB3-210ENST00000489475 PRB4P10163 310 aaPredicted RBP20.3■□□□□ 0.84
HOXB3-210ENST00000489475 FLI1Q01543 452 aaPredicted RBP20.3■□□□□ 0.84
HOXB3-210ENST00000489475 PRNTQ86SH4 94 aa20.3■□□□□ 0.84
HOXB3-210ENST00000489475 Q86TA4 180 aa20.3■□□□□ 0.84
HOXB3-210ENST00000489475 MRPL53Q96EL3 112 aaKnown RBP20.3■□□□□ 0.84
HOXB3-210ENST00000489475 H7BYZ3 331 aa20.29■□□□□ 0.84
HOXB3-210ENST00000489475 OR5I1Q13606 314 aa20.29■□□□□ 0.84
HOXB3-210ENST00000489475 IGKV2-40A0A087WW87 121 aaPredicted RBP20.28■□□□□ 0.84
HOXB3-210ENST00000489475 CXorf65A6NEN9 183 aa20.28■□□□□ 0.84
HOXB3-210ENST00000489475 PPP1R2P9O14990 202 aa20.28■□□□□ 0.84
HOXB3-210ENST00000489475 GCGP01275 180 aa20.28■□□□□ 0.84
HOXB3-210ENST00000489475 IGKV2D-40P01614 121 aaPredicted RBP20.28■□□□□ 0.84
HOXB3-210ENST00000489475 PSG8Q9UQ74 426 aa20.28■□□□□ 0.84
HOXB3-210ENST00000489475 SOCS3O14543 225 aa20.27■□□□□ 0.84
HOXB3-210ENST00000489475 SAMD13Q5VXD3 122 aa20.27■□□□□ 0.84
HOXB3-210ENST00000489475 MLXQ9UH92 298 aa20.27■□□□□ 0.84
HOXB3-210ENST00000489475 FBLL1A6NHQ2 334 aaKnown RBP20.27■□□□□ 0.84
HOXB3-210ENST00000489475 ERVFC1-1P60608 527 aa20.26■□□□□ 0.83
HOXB3-210ENST00000489475 OR10G8Q8NGN5 311 aa20.26■□□□□ 0.83
HOXB3-210ENST00000489475 ZFP30Q9Y2G7 519 aa20.26■□□□□ 0.83
HOXB3-210ENST00000489475 NIPBLQ6KC79 2804 aaeCLIP20.26■□□□□ 0.832e-6■■■■□ 25.1
HOXB3-210ENST00000489475 ADAMTSL5Q6ZMM2 481 aa20.25■□□□□ 0.83
HOXB3-210ENST00000489475 GBGT1Q8N5D6 347 aa20.25■□□□□ 0.83
HOXB3-210ENST00000489475 MLST8Q9BVC4 326 aa20.25■□□□□ 0.83
HOXB3-210ENST00000489475 FOXL1Q12952 345 aa20.25■□□□□ 0.83
HOXB3-210ENST00000489475 NSUN5P1Q3KNT7 163 aa20.25■□□□□ 0.83
HOXB3-210ENST00000489475 TMEM183AQ8IXX5 376 aa20.25■□□□□ 0.83
HOXB3-210ENST00000489475 C15orf54Q8N8G6 183 aa20.25■□□□□ 0.83
HOXB3-210ENST00000489475 KRTAP10-3P60369 221 aa20.24■□□□□ 0.83
HOXB3-210ENST00000489475 NDUFA11Q86Y39 141 aa20.24■□□□□ 0.83
HOXB3-210ENST00000489475 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP20.24■□□□□ 0.83
HOXB3-210ENST00000489475 ZNF738Q8NE65 137 aa20.24■□□□□ 0.83
HOXB3-210ENST00000489475 BIN3Q9NQY0 253 aa20.24■□□□□ 0.83
HOXB3-210ENST00000489475 RBAKDNA6NC62 111 aa20.23■□□□□ 0.83
HOXB3-210ENST00000489475 ADARB2-AS1A8MUL3 147 aa20.23■□□□□ 0.83
HOXB3-210ENST00000489475 PRAC2D3DTV9 90 aa20.23■□□□□ 0.83
HOXB3-210ENST00000489475 ID1P41134 155 aa20.23■□□□□ 0.83
HOXB3-210ENST00000489475 MS4A6AQ9H2W1 248 aa20.23■□□□□ 0.83
HOXB3-210ENST00000489475 URGCP-MRPS24S4R325 110 aa20.23■□□□□ 0.83
HOXB3-210ENST00000489475 CSN3P07498 182 aa20.23■□□□□ 0.83
HOXB3-210ENST00000489475 PRR27Q6MZM9 219 aa20.23■□□□□ 0.83
HOXB3-210ENST00000489475 DCANP1Q8TF63 244 aa20.23■□□□□ 0.83
HOXB3-210ENST00000489475 C20orf173Q96LM9 149 aa20.23■□□□□ 0.83
HOXB3-210ENST00000489475 VGLL1Q99990 258 aa20.23■□□□□ 0.83
HOXB3-210ENST00000489475 OSTCQ9NRP0 149 aa20.23■□□□□ 0.83
HOXB3-210ENST00000489475 WFDC3Q8IUB2 231 aa20.22■□□□□ 0.83
HOXB3-210ENST00000489475 FAM24BQ8N5W8 94 aa20.22■□□□□ 0.83
HOXB3-210ENST00000489475 RNASE7Q9H1E1 156 aaKnown RBP20.22■□□□□ 0.83
HOXB3-210ENST00000489475 JMJD1CQ15652 2540 aa20.22■□□□□ 0.83
HOXB3-210ENST00000489475 IBA57Q5T440 356 aaKnown RBP20.21■□□□□ 0.83
HOXB3-210ENST00000489475 OVOL1O14753 267 aa20.2■□□□□ 0.82
HOXB3-210ENST00000489475 DYNLRB2Q8TF09 96 aa20.2■□□□□ 0.82
HOXB3-210ENST00000489475 PAFAH1B2P68402 229 aa20.2■□□□□ 0.82
HOXB3-210ENST00000489475 COLCA2A8K830 154 aa20.19■□□□□ 0.82
HOXB3-210ENST00000489475 S100PP25815 95 aa20.19■□□□□ 0.82
HOXB3-210ENST00000489475 TFPI2P48307 235 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms